RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 LY9Q9HBG7 655 aa13.98□□□□□ -0.17
ATG4B-207ENST00000415107 ADAMTS5Q9UNA0 930 aa13.98□□□□□ -0.17
ATG4B-207ENST00000415107 IFIT3O14879 490 aaKnown RBP13.97□□□□□ -0.17
ATG4B-207ENST00000415107 FDX1P10109 184 aa13.97□□□□□ -0.17
ATG4B-207ENST00000415107 BCRP11274 1271 aa13.97□□□□□ -0.17
ATG4B-207ENST00000415107 BMP3P12645 472 aa13.97□□□□□ -0.17
ATG4B-207ENST00000415107 RPS6KB1P23443 525 aa13.97□□□□□ -0.17
ATG4B-207ENST00000415107 IRX3P78415 501 aaPredicted RBP13.97□□□□□ -0.17
ATG4B-207ENST00000415107 TROAPQ12815 778 aa13.97□□□□□ -0.17
ATG4B-207ENST00000415107 COL9A3Q14050 684 aaPredicted RBP13.97□□□□□ -0.17
ATG4B-207ENST00000415107 COG2Q14746 738 aa13.97□□□□□ -0.17
ATG4B-207ENST00000415107 ZYXQ15942 572 aaKnown RBP13.97□□□□□ -0.17
ATG4B-207ENST00000415107 GPATCH4Q5T3I0 446 aaKnown RBP13.97□□□□□ -0.17
ATG4B-207ENST00000415107 BLOC1S2Q6QNY1 142 aa13.97□□□□□ -0.17
ATG4B-207ENST00000415107 C17orf99Q6UX52 265 aa13.97□□□□□ -0.17
ATG4B-207ENST00000415107 BTNL9Q6UXG8 535 aa13.97□□□□□ -0.17
ATG4B-207ENST00000415107 MB21D1Q8N884 522 aa13.97□□□□□ -0.17
ATG4B-207ENST00000415107 JAKMIP1Q96N16 626 aaKnown RBP13.97□□□□□ -0.17
ATG4B-207ENST00000415107 KAT14Q9H8E8 782 aa13.97□□□□□ -0.17
ATG4B-207ENST00000415107 MORF4L1Q9UBU8 362 aa13.97□□□□□ -0.17
ATG4B-207ENST00000415107 NID2Q14112 1375 aa13.96□□□□□ -0.17
ATG4B-207ENST00000415107 SPDYE16A6NNV3 312 aaPredicted RBP13.96□□□□□ -0.17
ATG4B-207ENST00000415107 TRPA1O75762 1119 aa13.96□□□□□ -0.17
ATG4B-207ENST00000415107 DDAH1O94760 285 aa13.96□□□□□ -0.17
ATG4B-207ENST00000415107 DSG3P32926 999 aa13.96□□□□□ -0.17
ATG4B-207ENST00000415107 SLC1A4P43007 532 aa13.96□□□□□ -0.17
ATG4B-207ENST00000415107 EVCP57679 992 aa13.96□□□□□ -0.17
ATG4B-207ENST00000415107 HERVK_113P62684 666 aa13.96□□□□□ -0.17
ATG4B-207ENST00000415107 FAM110CQ1W6H9 321 aa13.96□□□□□ -0.17
ATG4B-207ENST00000415107 ASPRV1Q53RT3 343 aa13.96□□□□□ -0.17
ATG4B-207ENST00000415107 TMEM67Q5HYA8 995 aa13.96□□□□□ -0.17
ATG4B-207ENST00000415107 RUFY3Q7L099 469 aa13.96□□□□□ -0.17
ATG4B-207ENST00000415107 FAM160B2Q86V87 743 aa13.96□□□□□ -0.17
ATG4B-207ENST00000415107 SPICE1Q8N0Z3 855 aa13.96□□□□□ -0.17
ATG4B-207ENST00000415107 ALDH8A1Q9H2A2 487 aaPredicted RBP13.96□□□□□ -0.17
ATG4B-207ENST00000415107 UPF2Q9HAU5 1272 aaKnown RBP13.96□□□□□ -0.17
ATG4B-207ENST00000415107 HOXC10Q9NYD6 342 aa13.96□□□□□ -0.17
ATG4B-207ENST00000415107 FEM1BQ9UK73 627 aa13.96□□□□□ -0.17
ATG4B-207ENST00000415107 PPP1R9AQ9ULJ8 1098 aa13.96□□□□□ -0.17
ATG4B-207ENST00000415107 ATP2A1O14983 1001 aa13.95□□□□□ -0.18
ATG4B-207ENST00000415107 HSPA1AP0DMV8 641 aaKnown RBP13.95□□□□□ -0.18
ATG4B-207ENST00000415107 HSPA1BP0DMV9 641 aaKnown RBP13.95□□□□□ -0.18
ATG4B-207ENST00000415107 CYP2C8P10632 490 aa13.95□□□□□ -0.18
ATG4B-207ENST00000415107 CASTP20810 708 aaKnown RBP13.95□□□□□ -0.18
ATG4B-207ENST00000415107 STAT2P52630 851 aa13.95□□□□□ -0.18
ATG4B-207ENST00000415107 ZNF543Q08ER8 600 aa13.95□□□□□ -0.18
ATG4B-207ENST00000415107 FAM83BQ5T0W9 1011 aa13.95□□□□□ -0.18
ATG4B-207ENST00000415107 SMCR8Q8TEV9 937 aaPredicted RBP13.95□□□□□ -0.18
ATG4B-207ENST00000415107 TANGO6Q9C0B7 1094 aa13.95□□□□□ -0.18
ATG4B-207ENST00000415107 RABGAP1Q9Y3P9 1069 aa13.95□□□□□ -0.18
ATG4B-207ENST00000415107 GPR25O00155 361 aa13.94□□□□□ -0.18
ATG4B-207ENST00000415107 FLOT1O75955 427 aa13.94□□□□□ -0.18
ATG4B-207ENST00000415107 CALM1P0DP23 149 aa13.94□□□□□ -0.18
ATG4B-207ENST00000415107 CALM2P0DP24 149 aa13.94□□□□□ -0.18
ATG4B-207ENST00000415107 CALM3P0DP25 149 aa13.94□□□□□ -0.18
ATG4B-207ENST00000415107 CTCFP49711 727 aaPredicted RBP13.94□□□□□ -0.18
ATG4B-207ENST00000415107 OAZ1P54368 228 aa13.94□□□□□ -0.18
ATG4B-207ENST00000415107 CHST3Q7LGC8 479 aa13.94□□□□□ -0.18
ATG4B-207ENST00000415107 PRPF38AQ8NAV1 312 aaKnown RBP13.94□□□□□ -0.18
ATG4B-207ENST00000415107 CHURC1Q8WUH1 139 aa13.94□□□□□ -0.18
ATG4B-207ENST00000415107 P2RX7Q99572 595 aaKnown RBP13.94□□□□□ -0.18
ATG4B-207ENST00000415107 SLF1Q9BQI6 1058 aa13.94□□□□□ -0.18
ATG4B-207ENST00000415107 C22orf23Q9BZE7 217 aa13.94□□□□□ -0.18
ATG4B-207ENST00000415107 CYP46A1Q9Y6A2 500 aa13.94□□□□□ -0.18
ATG4B-207ENST00000415107 PALM3A6NDB9 673 aaPredicted RBP13.93□□□□□ -0.18
ATG4B-207ENST00000415107 FOXN1O15353 648 aa13.93□□□□□ -0.18
ATG4B-207ENST00000415107 HSPA8P11142 646 aaKnown RBP13.93□□□□□ -0.18
ATG4B-207ENST00000415107 SMARCA1P28370 1054 aa13.93□□□□□ -0.18
ATG4B-207ENST00000415107 GRM4Q14833 912 aa13.93□□□□□ -0.18
ATG4B-207ENST00000415107 PPP2R5BQ15173 497 aa13.93□□□□□ -0.18
ATG4B-207ENST00000415107 POTEEQ6S8J3 1075 aa13.93□□□□□ -0.18
ATG4B-207ENST00000415107 CATIPQ7Z7H3 387 aa13.93□□□□□ -0.18
ATG4B-207ENST00000415107 ZNF654Q8IZM8 581 aa13.93□□□□□ -0.18
ATG4B-207ENST00000415107 REPS2Q8NFH8 660 aa13.93□□□□□ -0.18
ATG4B-207ENST00000415107 TBC1D32Q96NH3 1257 aa13.93□□□□□ -0.18
ATG4B-207ENST00000415107 KIF2CQ99661 725 aa13.93□□□□□ -0.18
ATG4B-207ENST00000415107 SENP2Q9HC62 589 aa13.93□□□□□ -0.18
ATG4B-207ENST00000415107 CCDC69A6NI79 296 aa13.92□□□□□ -0.18
ATG4B-207ENST00000415107 TMEM232C9JQI7 657 aa13.92□□□□□ -0.18
ATG4B-207ENST00000415107 VWA5AO00534 786 aa13.92□□□□□ -0.18
ATG4B-207ENST00000415107 TBC1D8O95759 1140 aa13.92□□□□□ -0.18
ATG4B-207ENST00000415107 PARP1P09874 1014 aaKnown RBP13.92□□□□□ -0.18
ATG4B-207ENST00000415107 APOA5Q6Q788 366 aa13.92□□□□□ -0.18
ATG4B-207ENST00000415107 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.92□□□□□ -0.18
ATG4B-207ENST00000415107 NUP88Q99567 741 aaPredicted RBP13.92□□□□□ -0.18
ATG4B-207ENST00000415107 R3HDMLQ9H3Y0 253 aa13.92□□□□□ -0.18
ATG4B-207ENST00000415107 SLC38A10Q9HBR0 1119 aa13.92□□□□□ -0.18
ATG4B-207ENST00000415107 RBPJLQ9UBG7 517 aa13.92□□□□□ -0.18
ATG4B-207ENST00000415107 MAD2L2Q9UI95 211 aa13.92□□□□□ -0.18
ATG4B-207ENST00000415107 PNMA2Q9UL42 364 aa13.92□□□□□ -0.18
ATG4B-207ENST00000415107 SLC12A7Q9Y666 1083 aa13.92□□□□□ -0.18
ATG4B-207ENST00000415107 CNMDO75829 334 aa13.91□□□□□ -0.18
ATG4B-207ENST00000415107 GNRH1P01148 92 aa13.91□□□□□ -0.18
ATG4B-207ENST00000415107 KIF5BP33176 963 aa13.91□□□□□ -0.18
ATG4B-207ENST00000415107 COPB2P35606 906 aa13.91□□□□□ -0.18
ATG4B-207ENST00000415107 ERVK-9P63128 1117 aa13.91□□□□□ -0.18
ATG4B-207ENST00000415107 ERVK-24P63145 666 aa13.91□□□□□ -0.18
ATG4B-207ENST00000415107 SP3Q02447 781 aa13.91□□□□□ -0.18
ATG4B-207ENST00000415107 Q6ZUG5 572 aa13.91□□□□□ -0.18
ATG4B-207ENST00000415107 KCTD1Q719H9 257 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms