RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 FYB2Q5VWT5 728 aa15.18■□□□□ 0.02
SMARCA4-202ENST00000413806 TAOK1Q7L7X3 1001 aa15.18■□□□□ 0.02
SMARCA4-202ENST00000413806 SUPT20HQ8NEM7 779 aa15.18■□□□□ 0.02
SMARCA4-202ENST00000413806 TRIM58Q8NG06 486 aa15.18■□□□□ 0.02
SMARCA4-202ENST00000413806 CTTNBP2NLQ9P2B4 639 aa15.18■□□□□ 0.02
SMARCA4-202ENST00000413806 GKAP1Q5VSY0 366 aaPredicted RBP15.18■□□□□ 0.02
SMARCA4-202ENST00000413806 TRIM68Q6AZZ1 485 aa15.18■□□□□ 0.02
SMARCA4-202ENST00000413806 SPATS2Q86XZ4 545 aaKnown RBP15.18■□□□□ 0.02
SMARCA4-202ENST00000413806 LRRC8AQ8IWT6 810 aa15.18■□□□□ 0.02
SMARCA4-202ENST00000413806 MYCT1Q8N699 235 aa15.18■□□□□ 0.02
SMARCA4-202ENST00000413806 MAIP1Q8WWC4 291 aa15.18■□□□□ 0.02
SMARCA4-202ENST00000413806 SAR1BQ9Y6B6 198 aa15.18■□□□□ 0.02
SMARCA4-202ENST00000413806 PREX2Q70Z35 1606 aa15.18■□□□□ 0.02
SMARCA4-202ENST00000413806 CDK12Q9NYV4 1490 aaPredicted RBP15.17■□□□□ 0.02
SMARCA4-202ENST00000413806 ZWINTO95229 277 aa15.17■□□□□ 0.02
SMARCA4-202ENST00000413806 POLD1P28340 1107 aa15.17■□□□□ 0.02
SMARCA4-202ENST00000413806 SNCBQ16143 134 aa15.17■□□□□ 0.02
SMARCA4-202ENST00000413806 DPP8Q6V1X1 898 aaPredicted RBP15.17■□□□□ 0.02
SMARCA4-202ENST00000413806 KCNG1Q9UIX4 513 aa15.17■□□□□ 0.02
SMARCA4-202ENST00000413806 BRD2P25440 801 aaKnown RBP15.17■□□□□ 0.02
SMARCA4-202ENST00000413806 SNX16P57768 344 aa15.17■□□□□ 0.02
SMARCA4-202ENST00000413806 LUC7L3O95232 432 aaKnown RBP15.17■□□□□ 0.02
SMARCA4-202ENST00000413806 DNM2P50570 870 aa15.17■□□□□ 0.02
SMARCA4-202ENST00000413806 FAM47AQ5JRC9 791 aa15.17■□□□□ 0.02
SMARCA4-202ENST00000413806 ZMYM1Q5SVZ6 1142 aa15.17■□□□□ 0.02
SMARCA4-202ENST00000413806 MCUR1Q96AQ8 359 aa15.17■□□□□ 0.02
SMARCA4-202ENST00000413806 LMTK3Q96Q04 1460 aa15.17■□□□□ 0.02
SMARCA4-202ENST00000413806 H7C1D1 291 aa15.17■□□□□ 0.02
SMARCA4-202ENST00000413806 SCRN1Q12765 414 aa15.17■□□□□ 0.02
SMARCA4-202ENST00000413806 PKP1Q13835 747 aa15.17■□□□□ 0.02
SMARCA4-202ENST00000413806 TDRD7Q8NHU6 1098 aaKnown RBP15.17■□□□□ 0.02
SMARCA4-202ENST00000413806 HOOK2Q96ED9 719 aa15.17■□□□□ 0.02
SMARCA4-202ENST00000413806 MRPL44Q9H9J2 332 aaKnown RBP15.17■□□□□ 0.02
SMARCA4-202ENST00000413806 MAGEF1Q9HAY2 307 aa15.17■□□□□ 0.02
SMARCA4-202ENST00000413806 GCNT3O95395 438 aa15.16■□□□□ 0.02
SMARCA4-202ENST00000413806 FGAP02671 866 aa15.16■□□□□ 0.02
SMARCA4-202ENST00000413806 ADKP55263 362 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-202ENST00000413806 RPS8P62241 208 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-202ENST00000413806 CUL4AQ13619 759 aa15.16■□□□□ 0.02
SMARCA4-202ENST00000413806 CDAN1Q8IWY9 1227 aa15.16■□□□□ 0.02
SMARCA4-202ENST00000413806 PICK1Q9NRD5 415 aa15.16■□□□□ 0.02
SMARCA4-202ENST00000413806 TMOD4Q9NZQ9 345 aa15.16■□□□□ 0.02
SMARCA4-202ENST00000413806 EXOC3O60645 756 aa15.16■□□□□ 0.02
SMARCA4-202ENST00000413806 ZNF131P52739 623 aa15.16■□□□□ 0.02
SMARCA4-202ENST00000413806 GNGT1P63211 74 aa15.16■□□□□ 0.02
SMARCA4-202ENST00000413806 MUM1Q2TAK8 710 aa15.16■□□□□ 0.02
SMARCA4-202ENST00000413806 LONRF3Q496Y0 759 aa15.16■□□□□ 0.02
SMARCA4-202ENST00000413806 VSIG1Q86XK7 387 aa15.16■□□□□ 0.02
SMARCA4-202ENST00000413806 PPP2R2CQ9Y2T4 447 aa15.16■□□□□ 0.02
SMARCA4-202ENST00000413806 PSDA5PKW4 1024 aaPredicted RBP15.16■□□□□ 0.02
SMARCA4-202ENST00000413806 PPP6R2O75170 966 aa15.16■□□□□ 0.02
SMARCA4-202ENST00000413806 SP4Q02446 784 aa15.16■□□□□ 0.02
SMARCA4-202ENST00000413806 TRPC3Q13507 836 aa15.16■□□□□ 0.02
SMARCA4-202ENST00000413806 TNKSO95271 1327 aa15.16■□□□□ 0.02
SMARCA4-202ENST00000413806 PFDN1O60925 122 aa15.16■□□□□ 0.02
SMARCA4-202ENST00000413806 SPATA1Q5VX52 437 aa15.16■□□□□ 0.02
SMARCA4-202ENST00000413806 RRAGAQ7L523 313 aa15.16■□□□□ 0.02
SMARCA4-202ENST00000413806 PEX26Q7Z412 305 aa15.16■□□□□ 0.02
SMARCA4-202ENST00000413806 PARP2Q9UGN5 583 aa15.16■□□□□ 0.02
SMARCA4-202ENST00000413806 EFCAB8A8MWE9 144 aa15.15■□□□□ 0.02
SMARCA4-202ENST00000413806 PPFIA4O75335 1185 aa15.15■□□□□ 0.02
SMARCA4-202ENST00000413806 SCG2P13521 617 aa15.15■□□□□ 0.02
SMARCA4-202ENST00000413806 TYW1BQ6NUM6 668 aa15.15■□□□□ 0.02
SMARCA4-202ENST00000413806 USP17L12C9JPN9 530 aa15.15■□□□□ 0.02
SMARCA4-202ENST00000413806 USP17L21D6R901 530 aa15.15■□□□□ 0.02
SMARCA4-202ENST00000413806 LONP1P36776 959 aaKnown RBP15.15■□□□□ 0.02
SMARCA4-202ENST00000413806 MYOCDQ8IZQ8 938 aa15.15■□□□□ 0.02
SMARCA4-202ENST00000413806 DIXDC1Q155Q3 683 aa15.15■□□□□ 0.02
SMARCA4-202ENST00000413806 CFAP157Q5JU67 520 aa15.15■□□□□ 0.02
SMARCA4-202ENST00000413806 NELFCDQ8IXH7 590 aa15.15■□□□□ 0.02
SMARCA4-202ENST00000413806 FAM204AQ9H8W3 233 aa15.15■□□□□ 0.02
SMARCA4-202ENST00000413806 DBN1Q16643 649 aa15.15■□□□□ 0.02
SMARCA4-202ENST00000413806 FBXO18Q8NFZ0 1043 aa15.15■□□□□ 0.02
SMARCA4-202ENST00000413806 IWS1Q96ST2 819 aa15.15■□□□□ 0.02
SMARCA4-202ENST00000413806 RAB17Q9H0T7 212 aa15.15■□□□□ 0.02
SMARCA4-202ENST00000413806 MAP3K15Q6ZN16 1313 aa15.15■□□□□ 0.02
SMARCA4-202ENST00000413806 hCG_1642624A0A1W2PR95 340 aa15.15■□□□□ 0.02
SMARCA4-202ENST00000413806 ZBED4O75132 1171 aa15.15■□□□□ 0.02
SMARCA4-202ENST00000413806 TTLL7Q6ZT98 887 aa15.15■□□□□ 0.02
SMARCA4-202ENST00000413806 LSM14BQ9BX40 385 aaKnown RBP15.15■□□□□ 0.02
SMARCA4-202ENST00000413806 TSPYL2Q9H2G4 693 aaPredicted RBP15.15■□□□□ 0.02
SMARCA4-202ENST00000413806 PTCH1Q13635 1447 aa15.15■□□□□ 0.02
SMARCA4-202ENST00000413806 NDUFA8P51970 172 aa15.14■□□□□ 0.01
SMARCA4-202ENST00000413806 HSPA2P54652 639 aa15.14■□□□□ 0.01
SMARCA4-202ENST00000413806 RNASE9P60153 205 aaKnown RBP15.14■□□□□ 0.01
SMARCA4-202ENST00000413806 LRRC24Q50LG9 513 aa15.14■□□□□ 0.01
SMARCA4-202ENST00000413806 KLHL7Q8IXQ5 586 aa15.14■□□□□ 0.01
SMARCA4-202ENST00000413806 STAMQ92783 540 aa15.14■□□□□ 0.01
SMARCA4-202ENST00000413806 TBC1D7Q9P0N9 293 aa15.14■□□□□ 0.01
SMARCA4-202ENST00000413806 ATP10DQ9P241 1426 aa15.14■□□□□ 0.01
SMARCA4-202ENST00000413806 BIN2Q9UBW5 565 aaPredicted RBP15.14■□□□□ 0.01
SMARCA4-202ENST00000413806 STK38LQ9Y2H1 464 aa15.14■□□□□ 0.01
SMARCA4-202ENST00000413806 NLRP1Q9C000 1473 aa15.14■□□□□ 0.01
SMARCA4-202ENST00000413806 USP6P35125 1406 aa15.14■□□□□ 0.01
SMARCA4-202ENST00000413806 TXNDC9O14530 226 aa15.14■□□□□ 0.01
SMARCA4-202ENST00000413806 SMIM24O75264 130 aa15.14■□□□□ 0.01
SMARCA4-202ENST00000413806 OR52Z1P0C646 297 aa15.14■□□□□ 0.01
SMARCA4-202ENST00000413806 ADD1P35611 737 aaKnown RBP15.14■□□□□ 0.01
SMARCA4-202ENST00000413806 SLC8A3P57103 927 aa15.14■□□□□ 0.01
SMARCA4-202ENST00000413806 SND1Q7KZF4 910 aaKnown RBP eCLIP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms