RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 NOVP48745 357 aa9.1□□□□□ -0.95
CPSF4-202ENST00000412686 LACTBP83111 547 aaPredicted RBP9.1□□□□□ -0.95
CPSF4-202ENST00000412686 Q3C1V9 767 aa9.1□□□□□ -0.95
CPSF4-202ENST00000412686 SLFN13Q68D06 897 aa9.1□□□□□ -0.95
CPSF4-202ENST00000412686 OTOP1Q7RTM1 612 aa9.1□□□□□ -0.95
CPSF4-202ENST00000412686 RASEFQ8IZ41 740 aa9.1□□□□□ -0.95
CPSF4-202ENST00000412686 LPAR1Q92633 364 aa9.1□□□□□ -0.95
CPSF4-202ENST00000412686 MKL1Q969V6 931 aa9.1□□□□□ -0.95
CPSF4-202ENST00000412686 ATG4CQ96DT6 458 aa9.1□□□□□ -0.95
CPSF4-202ENST00000412686 TMEM47Q9BQJ4 181 aa9.1□□□□□ -0.95
CPSF4-202ENST00000412686 SENP2Q9HC62 589 aa9.1□□□□□ -0.95
CPSF4-202ENST00000412686 GOPCQ9HD26 462 aa9.1□□□□□ -0.95
CPSF4-202ENST00000412686 BTBD7Q9P203 1132 aa9.1□□□□□ -0.95
CPSF4-202ENST00000412686 RBPJLQ9UBG7 517 aa9.1□□□□□ -0.95
CPSF4-202ENST00000412686 TRIM17Q9Y577 477 aa9.1□□□□□ -0.95
CPSF4-202ENST00000412686 GTF3C3Q9Y5Q9 886 aa9.1□□□□□ -0.95
CPSF4-202ENST00000412686 TNKSO95271 1327 aa9.09□□□□□ -0.95
CPSF4-202ENST00000412686 FRMPD2Q68DX3 1309 aaPredicted RBP9.09□□□□□ -0.95
CPSF4-202ENST00000412686 FLOT1O75955 427 aa9.09□□□□□ -0.95
CPSF4-202ENST00000412686 CD44P16070 742 aaKnown RBP9.09□□□□□ -0.95
CPSF4-202ENST00000412686 MCCP23508 829 aa9.09□□□□□ -0.95
CPSF4-202ENST00000412686 PSMC4P43686 418 aa9.09□□□□□ -0.95
CPSF4-202ENST00000412686 ANTXR2P58335 489 aa9.09□□□□□ -0.95
CPSF4-202ENST00000412686 FAM110CQ1W6H9 321 aa9.09□□□□□ -0.95
CPSF4-202ENST00000412686 CTU1Q7Z7A3 348 aaKnown RBP9.09□□□□□ -0.95
CPSF4-202ENST00000412686 IFNLR1Q8IU57 520 aaPredicted RBP9.09□□□□□ -0.95
CPSF4-202ENST00000412686 MB21D2Q8IYB1 491 aaPredicted RBP9.09□□□□□ -0.95
CPSF4-202ENST00000412686 GMCL1P1Q8NEA9 526 aa9.09□□□□□ -0.95
CPSF4-202ENST00000412686 ERO1AQ96HE7 468 aa9.09□□□□□ -0.95
CPSF4-202ENST00000412686 KRT23Q9C075 422 aa9.09□□□□□ -0.95
CPSF4-202ENST00000412686 MCOLN1Q9GZU1 580 aa9.09□□□□□ -0.95
CPSF4-202ENST00000412686 GPHNQ9NQX3 736 aaPredicted RBP9.09□□□□□ -0.95
CPSF4-202ENST00000412686 TCP11L1Q9NUJ3 509 aa9.09□□□□□ -0.95
CPSF4-202ENST00000412686 ISY1Q9ULR0 285 aaKnown RBP9.09□□□□□ -0.95
CPSF4-202ENST00000412686 PLXNB2O15031 1838 aa9.08□□□□□ -0.96
CPSF4-202ENST00000412686 TOP1P11387 765 aaKnown RBP9.08□□□□□ -0.96
CPSF4-202ENST00000412686 BMP3P12645 472 aa9.08□□□□□ -0.96
CPSF4-202ENST00000412686 GCLCP48506 637 aaPredicted RBP9.08□□□□□ -0.96
CPSF4-202ENST00000412686 ERVK-9P63128 1117 aa9.08□□□□□ -0.96
CPSF4-202ENST00000412686 ERVK-24P63145 666 aa9.08□□□□□ -0.96
CPSF4-202ENST00000412686 TRDNQ13061 729 aa9.08□□□□□ -0.96
CPSF4-202ENST00000412686 COG2Q14746 738 aa9.08□□□□□ -0.96
CPSF4-202ENST00000412686 SEC23AQ15436 765 aa9.08□□□□□ -0.96
CPSF4-202ENST00000412686 ADCK5Q3MIX3 580 aa9.08□□□□□ -0.96
CPSF4-202ENST00000412686 TTBK2Q6IQ55 1244 aa9.08□□□□□ -0.96
CPSF4-202ENST00000412686 KCTD1Q719H9 257 aa9.08□□□□□ -0.96
CPSF4-202ENST00000412686 RALYLQ86SE5 291 aaKnown RBP9.08□□□□□ -0.96
CPSF4-202ENST00000412686 IQCA1Q86XH1 822 aa9.08□□□□□ -0.96
CPSF4-202ENST00000412686 ENAHQ8N8S7 591 aaPredicted RBP9.08□□□□□ -0.96
CPSF4-202ENST00000412686 NCOA7Q8NI08 942 aa9.08□□□□□ -0.96
CPSF4-202ENST00000412686 TRIM47Q96LD4 638 aa9.08□□□□□ -0.96
CPSF4-202ENST00000412686 ZSCAN10Q96SZ4 725 aaPredicted RBP9.08□□□□□ -0.96
CPSF4-202ENST00000412686 LRRC2Q9BYS8 371 aa9.08□□□□□ -0.96
CPSF4-202ENST00000412686 PORCNQ9H237 461 aa9.08□□□□□ -0.96
CPSF4-202ENST00000412686 CNNM2Q9H8M5 875 aa9.08□□□□□ -0.96
CPSF4-202ENST00000412686 EFCC1Q9HA90 598 aa9.08□□□□□ -0.96
CPSF4-202ENST00000412686 MORF4L1Q9UBU8 362 aa9.08□□□□□ -0.96
CPSF4-202ENST00000412686 GABRQQ9UN88 632 aa9.08□□□□□ -0.96
CPSF4-202ENST00000412686 FMNL1O95466 1100 aaPredicted RBP9.07□□□□□ -0.96
CPSF4-202ENST00000412686 PDHBP11177 359 aa9.07□□□□□ -0.96
CPSF4-202ENST00000412686 CPA1P15085 419 aa9.07□□□□□ -0.96
CPSF4-202ENST00000412686 TAL1P17542 331 aaPredicted RBP9.07□□□□□ -0.96
CPSF4-202ENST00000412686 HSPA4P34932 840 aa9.07□□□□□ -0.96
CPSF4-202ENST00000412686 SLC1A4P43007 532 aa9.07□□□□□ -0.96
CPSF4-202ENST00000412686 FCGRTP55899 365 aa9.07□□□□□ -0.96
CPSF4-202ENST00000412686 SNAP25P60880 206 aa9.07□□□□□ -0.96
CPSF4-202ENST00000412686 PRKCZQ05513 592 aa9.07□□□□□ -0.96
CPSF4-202ENST00000412686 CCDC96Q2M329 555 aa9.07□□□□□ -0.96
CPSF4-202ENST00000412686 LBX2Q6XYB7 198 aa9.07□□□□□ -0.96
CPSF4-202ENST00000412686 TNS4Q8IZW8 715 aa9.07□□□□□ -0.96
CPSF4-202ENST00000412686 REPS2Q8NFH8 660 aa9.07□□□□□ -0.96
CPSF4-202ENST00000412686 GPRC5AQ8NFJ5 357 aa9.07□□□□□ -0.96
CPSF4-202ENST00000412686 KIFC2Q96AC6 838 aa9.07□□□□□ -0.96
CPSF4-202ENST00000412686 TCEANC2Q96MN5 208 aa9.07□□□□□ -0.96
CPSF4-202ENST00000412686 SLF1Q9BQI6 1058 aa9.07□□□□□ -0.96
CPSF4-202ENST00000412686 UBAC1Q9BSL1 405 aa9.07□□□□□ -0.96
CPSF4-202ENST00000412686 CPVLQ9H3G5 476 aa9.07□□□□□ -0.96
CPSF4-202ENST00000412686 GPCPD1Q9NPB8 672 aa9.07□□□□□ -0.96
CPSF4-202ENST00000412686 PPP1R9AQ9ULJ8 1098 aa9.07□□□□□ -0.96
CPSF4-202ENST00000412686 SYNPO2Q9UMS6 1093 aa9.07□□□□□ -0.96
CPSF4-202ENST00000412686 PTCH2Q9Y6C5 1203 aa9.07□□□□□ -0.96
CPSF4-202ENST00000412686 DOCK3Q8IZD9 2030 aa9.07□□□□□ -0.96
CPSF4-202ENST00000412686 TMEM232C9JQI7 657 aa9.06□□□□□ -0.96
CPSF4-202ENST00000412686 TNPO2O14787 897 aaKnown RBP9.06□□□□□ -0.96
CPSF4-202ENST00000412686 IFIT3O14879 490 aaKnown RBP9.06□□□□□ -0.96
CPSF4-202ENST00000412686 SEC24BO95487 1268 aa9.06□□□□□ -0.96
CPSF4-202ENST00000412686 GOLGA8HP0CJ92 632 aa9.06□□□□□ -0.96
CPSF4-202ENST00000412686 SLC16A2P36021 539 aa9.06□□□□□ -0.96
CPSF4-202ENST00000412686 PLS1Q14651 629 aa9.06□□□□□ -0.96
CPSF4-202ENST00000412686 KIF22Q14807 665 aa9.06□□□□□ -0.96
CPSF4-202ENST00000412686 TMEM132BQ14DG7 1078 aa9.06□□□□□ -0.96
CPSF4-202ENST00000412686 DGKHQ86XP1 1220 aa9.06□□□□□ -0.96
CPSF4-202ENST00000412686 PNMA1Q8ND90 353 aa9.06□□□□□ -0.96
CPSF4-202ENST00000412686 ANKS1AQ92625 1134 aa9.06□□□□□ -0.96
CPSF4-202ENST00000412686 GMCL1Q96IK5 515 aa9.06□□□□□ -0.96
CPSF4-202ENST00000412686 TTC14Q96N46 770 aa9.06□□□□□ -0.96
CPSF4-202ENST00000412686 MOV10L1Q9BXT6 1211 aaKnown RBP9.06□□□□□ -0.96
CPSF4-202ENST00000412686 KAT14Q9H8E8 782 aa9.06□□□□□ -0.96
CPSF4-202ENST00000412686 ADAMTS5Q9UNA0 930 aa9.06□□□□□ -0.96
CPSF4-202ENST00000412686 PTPN22Q9Y2R2 807 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms