RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 DESI2Q9BSY9 194 aa18.01■□□□□ 0.47
HOXD3-202ENST00000410016 CLCN6P51797 869 aa18.01■□□□□ 0.47
HOXD3-202ENST00000410016 TFAP4Q01664 338 aa18.01■□□□□ 0.47
HOXD3-202ENST00000410016 KRT222Q8N1A0 295 aa18.01■□□□□ 0.47
HOXD3-202ENST00000410016 STAG2Q8N3U4 1231 aa18.01■□□□□ 0.47
HOXD3-202ENST00000410016 CARD6Q9BX69 1037 aa18.01■□□□□ 0.47
HOXD3-202ENST00000410016 FAM205AQ6ZU69 1335 aa18■□□□□ 0.47
HOXD3-202ENST00000410016 KIAA1551Q9HCM1 1747 aa18■□□□□ 0.47
HOXD3-202ENST00000410016 SOWAHDA6NJG2 315 aa18■□□□□ 0.47
HOXD3-202ENST00000410016 EFCAB8A8MWE9 144 aa18■□□□□ 0.47
HOXD3-202ENST00000410016 M0R2N6 131 aa18■□□□□ 0.47
HOXD3-202ENST00000410016 TYW1BQ6NUM6 668 aa18■□□□□ 0.47
HOXD3-202ENST00000410016 AMIGO3Q86WK7 504 aa18■□□□□ 0.47
HOXD3-202ENST00000410016 BLIDQ8IZY5 108 aa18■□□□□ 0.47
HOXD3-202ENST00000410016 UBXN4Q92575 508 aa18■□□□□ 0.47
HOXD3-202ENST00000410016 MRPL44Q9H9J2 332 aaKnown RBP18■□□□□ 0.47
HOXD3-202ENST00000410016 SH3GLB2Q9NR46 395 aa18■□□□□ 0.47
HOXD3-202ENST00000410016 GTPBP6O43824 516 aaPredicted RBP17.99■□□□□ 0.47
HOXD3-202ENST00000410016 CALML3P27482 149 aa17.99■□□□□ 0.47
HOXD3-202ENST00000410016 CASQ1P31415 396 aa17.99■□□□□ 0.47
HOXD3-202ENST00000410016 SLC4A8Q2Y0W8 1093 aa17.99■□□□□ 0.47
HOXD3-202ENST00000410016 RAD9BQ6WBX8 426 aa17.99■□□□□ 0.47
HOXD3-202ENST00000410016 PYM1Q9BRP8 204 aaKnown RBP17.99■□□□□ 0.47
HOXD3-202ENST00000410016 KAT14Q9H8E8 782 aa17.99■□□□□ 0.47
HOXD3-202ENST00000410016 SLC35G1Q2M3R5 365 aa17.99■□□□□ 0.47
HOXD3-202ENST00000410016 SPTY2D1Q68D10 685 aaPredicted RBP17.99■□□□□ 0.47
HOXD3-202ENST00000410016 DZIP1Q86YF9 867 aaKnown RBP17.99■□□□□ 0.47
HOXD3-202ENST00000410016 PNMA1Q8ND90 353 aa17.99■□□□□ 0.47
HOXD3-202ENST00000410016 CTNND2Q9UQB3 1225 aa17.99■□□□□ 0.47
HOXD3-202ENST00000410016 ADGRG1Q9Y653 693 aa17.99■□□□□ 0.47
HOXD3-202ENST00000410016 COBLO75128 1261 aa17.98■□□□□ 0.47
HOXD3-202ENST00000410016 CDC25AP30304 524 aa17.98■□□□□ 0.47
HOXD3-202ENST00000410016 LONP1P36776 959 aaKnown RBP17.98■□□□□ 0.47
HOXD3-202ENST00000410016 SLC51AQ86UW1 340 aa17.98■□□□□ 0.47
HOXD3-202ENST00000410016 PPFIBP1Q86W92 1011 aa17.98■□□□□ 0.47
HOXD3-202ENST00000410016 MNS1Q8NEH6 495 aa17.98■□□□□ 0.47
HOXD3-202ENST00000410016 GPKOWQ92917 476 aaPredicted RBP eCLIP17.98■□□□□ 0.47
HOXD3-202ENST00000410016 DYNLL2Q96FJ2 89 aa17.98■□□□□ 0.47
HOXD3-202ENST00000410016 NAA15Q9BXJ9 866 aaKnown RBP17.98■□□□□ 0.47
HOXD3-202ENST00000410016 LIMA1Q9UHB6 759 aaKnown RBP17.98■□□□□ 0.47
HOXD3-202ENST00000410016 RWDD2AQ9UIY3 292 aa17.98■□□□□ 0.47
HOXD3-202ENST00000410016 PCDHA4Q9UN74 947 aa17.98■□□□□ 0.47
HOXD3-202ENST00000410016 MRFAP1Q9Y605 127 aa17.98■□□□□ 0.47
HOXD3-202ENST00000410016 LAMB1P07942 1786 aa17.98■□□□□ 0.47
HOXD3-202ENST00000410016 MFAP3LO75121 409 aa17.98■□□□□ 0.47
HOXD3-202ENST00000410016 ZPR1O75312 459 aa17.98■□□□□ 0.47
HOXD3-202ENST00000410016 GYPCP04921 128 aa17.98■□□□□ 0.47
HOXD3-202ENST00000410016 FECHP22830 423 aa17.98■□□□□ 0.47
HOXD3-202ENST00000410016 CPLX3Q8WVH0 158 aa17.98■□□□□ 0.47
HOXD3-202ENST00000410016 MAD2L2Q9UI95 211 aa17.98■□□□□ 0.47
HOXD3-202ENST00000410016 FHOD1Q9Y613 1164 aa17.98■□□□□ 0.47
HOXD3-202ENST00000410016 GNPATO15228 680 aa17.97■□□□□ 0.47
HOXD3-202ENST00000410016 CCDC175P0C221 793 aa17.97■□□□□ 0.47
HOXD3-202ENST00000410016 NT5C2P49902 561 aa17.97■□□□□ 0.47
HOXD3-202ENST00000410016 GABPB1Q06547 395 aaPredicted RBP17.97■□□□□ 0.47
HOXD3-202ENST00000410016 KRT31Q15323 416 aa17.97■□□□□ 0.47
HOXD3-202ENST00000410016 RRAGBQ5VZM2 374 aa17.97■□□□□ 0.47
HOXD3-202ENST00000410016 IRX2Q9BZI1 471 aaPredicted RBP17.97■□□□□ 0.47
HOXD3-202ENST00000410016 ITIH6Q6UXX5 1313 aa17.97■□□□□ 0.47
HOXD3-202ENST00000410016 CYTH3O43739 400 aa17.97■□□□□ 0.47
HOXD3-202ENST00000410016 ZRANB2O95218 330 aaKnown RBP eCLIP17.97■□□□□ 0.47
HOXD3-202ENST00000410016 CASP14P31944 242 aa17.97■□□□□ 0.47
HOXD3-202ENST00000410016 FXR1P51114 621 aaKnown RBP eCLIP17.97■□□□□ 0.47
HOXD3-202ENST00000410016 GRM4Q14833 912 aa17.97■□□□□ 0.47
HOXD3-202ENST00000410016 GRIK5Q16478 980 aa17.97■□□□□ 0.47
HOXD3-202ENST00000410016 FILIP1LQ4L180 1135 aa17.97■□□□□ 0.47
HOXD3-202ENST00000410016 ZNF658Q5TYW1 1059 aaPredicted RBP17.97■□□□□ 0.47
HOXD3-202ENST00000410016 RASGRP4Q8TDF6 673 aa17.97■□□□□ 0.47
HOXD3-202ENST00000410016 SH3RF3Q8TEJ3 882 aaPredicted RBP17.97■□□□□ 0.47
HOXD3-202ENST00000410016 COL24A1Q17RW2 1714 aa17.96■□□□□ 0.47
HOXD3-202ENST00000410016 USP17L3A6NCW0 530 aa17.96■□□□□ 0.47
HOXD3-202ENST00000410016 USP17L4A6NCW7 530 aa17.96■□□□□ 0.47
HOXD3-202ENST00000410016 IGSF3O75054 1194 aa17.96■□□□□ 0.47
HOXD3-202ENST00000410016 KARSQ15046 597 aaKnown RBP17.96■□□□□ 0.47
HOXD3-202ENST00000410016 NAALADL2Q58DX5 795 aa17.96■□□□□ 0.47
HOXD3-202ENST00000410016 USP17L1Q7RTZ2 530 aa17.96■□□□□ 0.47
HOXD3-202ENST00000410016 ARHGEF1Q92888 912 aaKnown RBP17.96■□□□□ 0.47
HOXD3-202ENST00000410016 TCP11L1Q9NUJ3 509 aa17.96■□□□□ 0.47
HOXD3-202ENST00000410016 ROBO3Q96MS0 1386 aa17.96■□□□□ 0.47
HOXD3-202ENST00000410016 A0A0U1RQJ8 604 aa17.96■□□□□ 0.47
HOXD3-202ENST00000410016 RPN1P04843 607 aaKnown RBP17.96■□□□□ 0.47
HOXD3-202ENST00000410016 LDHBP07195 334 aaKnown RBP17.96■□□□□ 0.47
HOXD3-202ENST00000410016 BMS1Q14692 1282 aaKnown RBP17.96■□□□□ 0.47
HOXD3-202ENST00000410016 RASGRP2Q7LDG7 609 aa17.96■□□□□ 0.47
HOXD3-202ENST00000410016 WDR66Q8TBY9 1149 aa17.96■□□□□ 0.47
HOXD3-202ENST00000410016 ATRIPQ8WXE1 791 aa17.96■□□□□ 0.47
HOXD3-202ENST00000410016 CCT6AP40227 531 aaKnown RBP17.95■□□□□ 0.46
HOXD3-202ENST00000410016 USP5P45974 858 aa17.95■□□□□ 0.46
HOXD3-202ENST00000410016 PPP4CP60510 307 aa17.95■□□□□ 0.46
HOXD3-202ENST00000410016 PAK1Q13153 545 aa17.95■□□□□ 0.46
HOXD3-202ENST00000410016 PCDHA6Q9UN73 950 aa17.95■□□□□ 0.46
HOXD3-202ENST00000410016 PCDHA8Q9Y5H6 950 aa17.95■□□□□ 0.46
HOXD3-202ENST00000410016 RNF225M0QZC1 329 aaPredicted RBP17.95■□□□□ 0.46
HOXD3-202ENST00000410016 PRCPP42785 496 aa17.95■□□□□ 0.46
HOXD3-202ENST00000410016 DIXDC1Q155Q3 683 aa17.95■□□□□ 0.46
HOXD3-202ENST00000410016 TCP11X2Q5H9J9 407 aa17.95■□□□□ 0.46
HOXD3-202ENST00000410016 RSRC2Q7L4I2 434 aaKnown RBP17.95■□□□□ 0.46
HOXD3-202ENST00000410016 CNGA4Q8IV77 575 aa17.95■□□□□ 0.46
HOXD3-202ENST00000410016 NELFBQ8WX92 580 aa17.95■□□□□ 0.46
HOXD3-202ENST00000410016 CCDC51Q96ER9 411 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms