RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 KLRC3Q07444 240 aa17.33■□□□□ 0.36
MCF2L-210ENST00000409954 TMEM132BQ14DG7 1078 aa17.33■□□□□ 0.36
MCF2L-210ENST00000409954 TSHZ3Q63HK5 1081 aa17.33■□□□□ 0.36
MCF2L-210ENST00000409954 RIOX2Q8IUF8 465 aa17.33■□□□□ 0.36
MCF2L-210ENST00000409954 MKL1Q969V6 931 aa17.33■□□□□ 0.36
MCF2L-210ENST00000409954 PPP1R9AQ9ULJ8 1098 aa17.33■□□□□ 0.36
MCF2L-210ENST00000409954 SYNPO2Q9UMS6 1093 aa17.33■□□□□ 0.36
MCF2L-210ENST00000409954 PLXNB2O15031 1838 aa17.33■□□□□ 0.36
MCF2L-210ENST00000409954 PFASO15067 1338 aa17.32■□□□□ 0.36
MCF2L-210ENST00000409954 RAD21O60216 631 aa17.32■□□□□ 0.36
MCF2L-210ENST00000409954 CYBAP13498 195 aa17.32■□□□□ 0.36
MCF2L-210ENST00000409954 SAMD1Q6SPF0 538 aaPredicted RBP17.32■□□□□ 0.36
MCF2L-210ENST00000409954 PRPF38AQ8NAV1 312 aaKnown RBP17.32■□□□□ 0.36
MCF2L-210ENST00000409954 PI4K2BQ8TCG2 481 aa17.32■□□□□ 0.36
MCF2L-210ENST00000409954 CLIP2Q9UDT6 1046 aa17.32■□□□□ 0.36
MCF2L-210ENST00000409954 NRBP1Q9UHY1 535 aa17.32■□□□□ 0.36
MCF2L-210ENST00000409954 DIS3Q9Y2L1 958 aaKnown RBP17.32■□□□□ 0.36
MCF2L-210ENST00000409954 DDX60LQ5H9U9 1706 aaKnown RBP17.31■□□□□ 0.36
MCF2L-210ENST00000409954 DNM1LO00429 736 aa17.31■□□□□ 0.36
MCF2L-210ENST00000409954 SEPT4O43236 478 aa17.31■□□□□ 0.36
MCF2L-210ENST00000409954 RRP1P56182 461 aaKnown RBP17.31■□□□□ 0.36
MCF2L-210ENST00000409954 PDE4BQ07343 736 aa17.31■□□□□ 0.36
MCF2L-210ENST00000409954 AAMPQ13685 434 aa17.31■□□□□ 0.36
MCF2L-210ENST00000409954 KCTD2Q14681 263 aa17.31■□□□□ 0.36
MCF2L-210ENST00000409954 FAM83BQ5T0W9 1011 aa17.31■□□□□ 0.36
MCF2L-210ENST00000409954 STK11IPQ8N1F8 1099 aa17.31■□□□□ 0.36
MCF2L-210ENST00000409954 FSD1Q9BTV5 496 aa17.31■□□□□ 0.36
MCF2L-210ENST00000409954 SENP6Q9GZR1 1112 aaPredicted RBP17.31■□□□□ 0.36
MCF2L-210ENST00000409954 FBXO28Q9NVF7 368 aa17.31■□□□□ 0.36
MCF2L-210ENST00000409954 ZMYND8Q9ULU4 1186 aaPredicted RBP17.31■□□□□ 0.36
MCF2L-210ENST00000409954 M0R2C6 588 aa17.3■□□□□ 0.36
MCF2L-210ENST00000409954 MX1P20591 662 aa17.3■□□□□ 0.36
MCF2L-210ENST00000409954 PPP4R3BQ5MIZ7 849 aa17.3■□□□□ 0.36
MCF2L-210ENST00000409954 ZMYM1Q5SVZ6 1142 aa17.3■□□□□ 0.36
MCF2L-210ENST00000409954 ANKRD45Q5TZF3 282 aa17.3■□□□□ 0.36
MCF2L-210ENST00000409954 TICAM2Q86XR7 235 aa17.3■□□□□ 0.36
MCF2L-210ENST00000409954 TRPV1Q8NER1 839 aa17.3■□□□□ 0.36
MCF2L-210ENST00000409954 MAML3Q96JK9 1138 aa17.3■□□□□ 0.36
MCF2L-210ENST00000409954 MMP19Q99542 508 aa17.3■□□□□ 0.36
MCF2L-210ENST00000409954 SLF1Q9BQI6 1058 aa17.3■□□□□ 0.36
MCF2L-210ENST00000409954 EPB41L4AQ9HCS5 686 aaPredicted RBP17.3■□□□□ 0.36
MCF2L-210ENST00000409954 MTMR4Q9NYA4 1195 aa17.3■□□□□ 0.36
MCF2L-210ENST00000409954 NAV1Q8NEY1 1877 aa17.3■□□□□ 0.36
MCF2L-210ENST00000409954 ROBO3Q96MS0 1386 aa17.29■□□□□ 0.36
MCF2L-210ENST00000409954 IGKV6D-41A0A0C4DH26 115 aa17.29■□□□□ 0.36
MCF2L-210ENST00000409954 ZBED4O75132 1171 aa17.29■□□□□ 0.36
MCF2L-210ENST00000409954 TTLL1O95922 423 aa17.29■□□□□ 0.36
MCF2L-210ENST00000409954 NEDD1Q8NHV4 660 aa17.29■□□□□ 0.36
MCF2L-210ENST00000409954 NAPBQ9H115 298 aa17.29■□□□□ 0.36
MCF2L-210ENST00000409954 ZNF214Q9UL59 606 aaPredicted RBP17.29■□□□□ 0.36
MCF2L-210ENST00000409954 CTDP1Q9Y5B0 961 aaPredicted RBP17.29■□□□□ 0.36
MCF2L-210ENST00000409954 TRIOBPQ9H2D6 2365 aa17.29■□□□□ 0.36
MCF2L-210ENST00000409954 ATP2A1O14983 1001 aa17.28■□□□□ 0.36
MCF2L-210ENST00000409954 FDX1P10109 184 aa17.28■□□□□ 0.36
MCF2L-210ENST00000409954 SYN1P17600 705 aa17.28■□□□□ 0.36
MCF2L-210ENST00000409954 HDAC1Q13547 482 aaPredicted RBP17.28■□□□□ 0.36
MCF2L-210ENST00000409954 LRRC26Q2I0M4 334 aa17.28■□□□□ 0.36
MCF2L-210ENST00000409954 REPS2Q8NFH8 660 aa17.28■□□□□ 0.36
MCF2L-210ENST00000409954 EVI5LQ96CN4 794 aa17.28■□□□□ 0.36
MCF2L-210ENST00000409954 SEC62Q99442 399 aaKnown RBP17.28■□□□□ 0.36
MCF2L-210ENST00000409954 TEX13BQ9BXU2 312 aa17.28■□□□□ 0.36
MCF2L-210ENST00000409954 FEM1BQ9UK73 627 aa17.28■□□□□ 0.36
MCF2L-210ENST00000409954 KBTBD13C9JR72 458 aa17.27■□□□□ 0.36
MCF2L-210ENST00000409954 PRDM1O75626 825 aa17.27■□□□□ 0.36
MCF2L-210ENST00000409954 NDUFB10O96000 172 aa17.27■□□□□ 0.36
MCF2L-210ENST00000409954 TSPY3P0CV98 308 aa17.27■□□□□ 0.36
MCF2L-210ENST00000409954 TSPY8P0CW00 308 aa17.27■□□□□ 0.36
MCF2L-210ENST00000409954 ZNF792Q3KQV3 632 aa17.27■□□□□ 0.36
MCF2L-210ENST00000409954 PRAMEF19Q5SWL8 479 aa17.27■□□□□ 0.36
MCF2L-210ENST00000409954 MSL3Q8N5Y2 521 aaKnown RBP17.27■□□□□ 0.36
MCF2L-210ENST00000409954 GMCL1P1Q8NEA9 526 aa17.27■□□□□ 0.36
MCF2L-210ENST00000409954 OTUD7AQ8TE49 926 aaPredicted RBP17.27■□□□□ 0.36
MCF2L-210ENST00000409954 DDX11Q96FC9 970 aa17.27■□□□□ 0.36
MCF2L-210ENST00000409954 CEP95Q96GE4 821 aa17.27■□□□□ 0.36
MCF2L-210ENST00000409954 TINF2Q9BSI4 451 aa17.27■□□□□ 0.36
MCF2L-210ENST00000409954 MAGEA10P43363 369 aaPredicted RBP17.26■□□□□ 0.35
MCF2L-210ENST00000409954 TFAP4Q01664 338 aa17.26■□□□□ 0.35
MCF2L-210ENST00000409954 PPARAQ07869 468 aa17.26■□□□□ 0.35
MCF2L-210ENST00000409954 GJC2Q5T442 439 aaPredicted RBP17.26■□□□□ 0.35
MCF2L-210ENST00000409954 GPR153Q6NV75 609 aa17.26■□□□□ 0.35
MCF2L-210ENST00000409954 CRBNQ96SW2 442 aa17.26■□□□□ 0.35
MCF2L-210ENST00000409954 PGK2P07205 417 aa17.25■□□□□ 0.35
MCF2L-210ENST00000409954 LRIT3Q3SXY7 679 aa17.25■□□□□ 0.35
MCF2L-210ENST00000409954 SLC39A5Q6ZMH5 540 aa17.25■□□□□ 0.35
MCF2L-210ENST00000409954 CHURC1Q8WUH1 139 aa17.25■□□□□ 0.35
MCF2L-210ENST00000409954 NUP88Q99567 741 aaPredicted RBP17.25■□□□□ 0.35
MCF2L-210ENST00000409954 UBE2OQ9C0C9 1292 aaKnown RBP17.25■□□□□ 0.35
MCF2L-210ENST00000409954 HELLSQ9NRZ9 838 aa17.25■□□□□ 0.35
MCF2L-210ENST00000409954 PRKAG2Q9UGJ0 569 aa17.25■□□□□ 0.35
MCF2L-210ENST00000409954 FBXO40Q9UH90 709 aa17.25■□□□□ 0.35
MCF2L-210ENST00000409954 SALL3Q9BXA9 1300 aa17.24■□□□□ 0.35
MCF2L-210ENST00000409954 BAZ2AQ9UIF9 1905 aaKnown RBP17.24■□□□□ 0.35
MCF2L-210ENST00000409954 RARBP10826 455 aa17.24■□□□□ 0.35
MCF2L-210ENST00000409954 BMP3P12645 472 aa17.24■□□□□ 0.35
MCF2L-210ENST00000409954 OAZ1P54368 228 aa17.24■□□□□ 0.35
MCF2L-210ENST00000409954 PDE1AP54750 535 aa17.24■□□□□ 0.35
MCF2L-210ENST00000409954 ALX1Q15699 326 aa17.24■□□□□ 0.35
MCF2L-210ENST00000409954 SLFN13Q68D06 897 aa17.24■□□□□ 0.35
MCF2L-210ENST00000409954 SNRNP48Q6IEG0 339 aaKnown RBP17.24■□□□□ 0.35
MCF2L-210ENST00000409954 TDHQ8IZJ6 230 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms