RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 TMEM67Q5HYA8 995 aa21.27■■□□□ 1
PAX3-208ENST00000409828 BLOC1S2Q6QNY1 142 aa21.27■■□□□ 1
PAX3-208ENST00000409828 C17orf99Q6UX52 265 aa21.27■■□□□ 1
PAX3-208ENST00000409828 PNMA1Q8ND90 353 aa21.27■■□□□ 1
PAX3-208ENST00000409828 SMCR8Q8TEV9 937 aaPredicted RBP21.27■■□□□ 1
PAX3-208ENST00000409828 CYP2C8P10632 490 aa21.26■□□□□ 0.99
PAX3-208ENST00000409828 SLC1A4P43007 532 aa21.26■□□□□ 0.99
PAX3-208ENST00000409828 HERVK_113P62684 666 aa21.26■□□□□ 0.99
PAX3-208ENST00000409828 SGMS1Q86VZ5 419 aa21.26■□□□□ 0.99
PAX3-208ENST00000409828 JAKMIP1Q96N16 626 aaKnown RBP21.26■□□□□ 0.99
PAX3-208ENST00000409828 P2RX7Q99572 595 aaKnown RBP21.26■□□□□ 0.99
PAX3-208ENST00000409828 TANGO6Q9C0B7 1094 aa21.26■□□□□ 0.99
PAX3-208ENST00000409828 ZSWIM6Q9HCJ5 1215 aa21.26■□□□□ 0.99
PAX3-208ENST00000409828 FEM1BQ9UK73 627 aa21.26■□□□□ 0.99
PAX3-208ENST00000409828 ADAMTS5Q9UNA0 930 aa21.26■□□□□ 0.99
PAX3-208ENST00000409828 A0A0G2JMZ2 1700 aa21.26■□□□□ 0.99
PAX3-208ENST00000409828 SH2B2O14492 632 aaPredicted RBP21.25■□□□□ 0.99
PAX3-208ENST00000409828 TBC1D8O95759 1140 aa21.25■□□□□ 0.99
PAX3-208ENST00000409828 FDX1P10109 184 aa21.25■□□□□ 0.99
PAX3-208ENST00000409828 PDHBP11177 359 aa21.25■□□□□ 0.99
PAX3-208ENST00000409828 BCRP11274 1271 aa21.25■□□□□ 0.99
PAX3-208ENST00000409828 DSG3P32926 999 aa21.25■□□□□ 0.99
PAX3-208ENST00000409828 FAM83BQ5T0W9 1011 aa21.25■□□□□ 0.99
PAX3-208ENST00000409828 GPATCH4Q5T3I0 446 aaKnown RBP21.25■□□□□ 0.99
PAX3-208ENST00000409828 CHST3Q7LGC8 479 aa21.25■□□□□ 0.99
PAX3-208ENST00000409828 MB21D1Q8N884 522 aa21.25■□□□□ 0.99
PAX3-208ENST00000409828 MAP3K14Q99558 947 aa21.25■□□□□ 0.99
PAX3-208ENST00000409828 LY9Q9HBG7 655 aa21.25■□□□□ 0.99
PAX3-208ENST00000409828 GPR25O00155 361 aa21.24■□□□□ 0.99
PAX3-208ENST00000409828 FOXN1O15353 648 aa21.24■□□□□ 0.99
PAX3-208ENST00000409828 RAD21O60216 631 aa21.24■□□□□ 0.99
PAX3-208ENST00000409828 FLOT1O75955 427 aa21.24■□□□□ 0.99
PAX3-208ENST00000409828 RPS6KB1P23443 525 aa21.24■□□□□ 0.99
PAX3-208ENST00000409828 FAM110CQ1W6H9 321 aa21.24■□□□□ 0.99
PAX3-208ENST00000409828 BTNL9Q6UXG8 535 aa21.24■□□□□ 0.99
PAX3-208ENST00000409828 FAM160B2Q86V87 743 aa21.24■□□□□ 0.99
PAX3-208ENST00000409828 PRPF38AQ8NAV1 312 aaKnown RBP21.24■□□□□ 0.99
PAX3-208ENST00000409828 CHURC1Q8WUH1 139 aa21.24■□□□□ 0.99
PAX3-208ENST00000409828 AGXT2Q9BYV1 514 aa21.24■□□□□ 0.99
PAX3-208ENST00000409828 UPF2Q9HAU5 1272 aaKnown RBP21.24■□□□□ 0.99
PAX3-208ENST00000409828 MORF4L1Q9UBU8 362 aa21.24■□□□□ 0.99
PAX3-208ENST00000409828 PPP1R9AQ9ULJ8 1098 aa21.24■□□□□ 0.99
PAX3-208ENST00000409828 SPDYE16A6NNV3 312 aaPredicted RBP21.23■□□□□ 0.99
PAX3-208ENST00000409828 HSPA8P11142 646 aaKnown RBP21.23■□□□□ 0.99
PAX3-208ENST00000409828 CASTP20810 708 aaKnown RBP21.23■□□□□ 0.99
PAX3-208ENST00000409828 ZNF543Q08ER8 600 aa21.23■□□□□ 0.99
PAX3-208ENST00000409828 TROAPQ12815 778 aa21.23■□□□□ 0.99
PAX3-208ENST00000409828 COL9A3Q14050 684 aaPredicted RBP21.23■□□□□ 0.99
PAX3-208ENST00000409828 RUFY3Q7L099 469 aa21.23■□□□□ 0.99
PAX3-208ENST00000409828 SLF1Q9BQI6 1058 aa21.23■□□□□ 0.99
PAX3-208ENST00000409828 BACH2Q9BYV9 841 aa21.23■□□□□ 0.99
PAX3-208ENST00000409828 R3HDMLQ9H3Y0 253 aa21.23■□□□□ 0.99
PAX3-208ENST00000409828 RABGAP1Q9Y3P9 1069 aa21.23■□□□□ 0.99
PAX3-208ENST00000409828 CYP46A1Q9Y6A2 500 aa21.23■□□□□ 0.99
PAX3-208ENST00000409828 RBM25P49756 843 aaKnown RBP21.22■□□□□ 0.99
PAX3-208ENST00000409828 STAT2P52630 851 aa21.22■□□□□ 0.99
PAX3-208ENST00000409828 RCAN1P53805 252 aa21.22■□□□□ 0.99
PAX3-208ENST00000409828 ASPRV1Q53RT3 343 aa21.22■□□□□ 0.99
PAX3-208ENST00000409828 CATIPQ7Z7H3 387 aa21.22■□□□□ 0.99
PAX3-208ENST00000409828 IL27Q8NEV9 243 aa21.22■□□□□ 0.99
PAX3-208ENST00000409828 NUP88Q99567 741 aaPredicted RBP21.22■□□□□ 0.99
PAX3-208ENST00000409828 COL11A1P12107 1806 aaPredicted RBP21.21■□□□□ 0.99
PAX3-208ENST00000409828 DDAH1O94760 285 aa21.21■□□□□ 0.99
PAX3-208ENST00000409828 SP3Q02447 781 aa21.21■□□□□ 0.99
PAX3-208ENST00000409828 RBPJLQ9UBG7 517 aa21.21■□□□□ 0.99
PAX3-208ENST00000409828 CASP8AP2Q9UKL3 1982 aa21.2■□□□□ 0.98
PAX3-208ENST00000409828 CCDC69A6NI79 296 aa21.2■□□□□ 0.98
PAX3-208ENST00000409828 TMEM232C9JQI7 657 aa21.2■□□□□ 0.98
PAX3-208ENST00000409828 FKTNO75072 461 aa21.2■□□□□ 0.98
PAX3-208ENST00000409828 CALM1P0DP23 149 aa21.2■□□□□ 0.98
PAX3-208ENST00000409828 CALM2P0DP24 149 aa21.2■□□□□ 0.98
PAX3-208ENST00000409828 CALM3P0DP25 149 aa21.2■□□□□ 0.98
PAX3-208ENST00000409828 C22orf23Q9BZE7 217 aa21.2■□□□□ 0.98
PAX3-208ENST00000409828 ALDH8A1Q9H2A2 487 aaPredicted RBP21.2■□□□□ 0.98
PAX3-208ENST00000409828 PRDM10Q9NQV6 1147 aa21.2■□□□□ 0.98
PAX3-208ENST00000409828 FBXO28Q9NVF7 368 aa21.2■□□□□ 0.98
PAX3-208ENST00000409828 CPA4Q9UI42 421 aa21.2■□□□□ 0.98
PAX3-208ENST00000409828 MGAMO43451 1857 aa21.2■□□□□ 0.98
PAX3-208ENST00000409828 ATP2A1O14983 1001 aa21.19■□□□□ 0.98
PAX3-208ENST00000409828 PARP1P09874 1014 aaKnown RBP21.19■□□□□ 0.98
PAX3-208ENST00000409828 EVCP57679 992 aa21.19■□□□□ 0.98
PAX3-208ENST00000409828 CCDC96Q2M329 555 aa21.19■□□□□ 0.98
PAX3-208ENST00000409828 POTEEQ6S8J3 1075 aa21.19■□□□□ 0.98
PAX3-208ENST00000409828 KCTD1Q719H9 257 aa21.19■□□□□ 0.98
PAX3-208ENST00000409828 ZNF654Q8IZM8 581 aa21.19■□□□□ 0.98
PAX3-208ENST00000409828 GPRC5AQ8NFJ5 357 aa21.19■□□□□ 0.98
PAX3-208ENST00000409828 ZNF296Q8WUU4 475 aaPredicted RBP21.19■□□□□ 0.98
PAX3-208ENST00000409828 SENP2Q9HC62 589 aa21.19■□□□□ 0.98
PAX3-208ENST00000409828 PALM3A6NDB9 673 aaPredicted RBP21.18■□□□□ 0.98
PAX3-208ENST00000409828 VWA5AO00534 786 aa21.18■□□□□ 0.98
PAX3-208ENST00000409828 OAZ1P54368 228 aa21.18■□□□□ 0.98
PAX3-208ENST00000409828 ERVK-9P63128 1117 aa21.18■□□□□ 0.98
PAX3-208ENST00000409828 ERVK-24P63145 666 aa21.18■□□□□ 0.98
PAX3-208ENST00000409828 GRM4Q14833 912 aa21.18■□□□□ 0.98
PAX3-208ENST00000409828 ARHGEF6Q15052 776 aa21.18■□□□□ 0.98
PAX3-208ENST00000409828 PPP2R5BQ15173 497 aa21.18■□□□□ 0.98
PAX3-208ENST00000409828 ANKRD13CQ8N6S4 541 aa21.18■□□□□ 0.98
PAX3-208ENST00000409828 ATG4CQ96DT6 458 aa21.18■□□□□ 0.98
PAX3-208ENST00000409828 ERO1AQ96HE7 468 aa21.18■□□□□ 0.98
PAX3-208ENST00000409828 LRRC2Q9BYS8 371 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms