RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 KIF5BP33176 963 aa17.32■□□□□ 0.36
SCAMP4-202ENST00000409472 AFMP43652 599 aa17.32■□□□□ 0.36
SCAMP4-202ENST00000409472 WWC2Q6AWC2 1192 aa17.32■□□□□ 0.36
SCAMP4-202ENST00000409472 ARMCX5Q6P1M9 558 aa17.32■□□□□ 0.36
SCAMP4-202ENST00000409472 CLEC10AQ8IUN9 316 aa17.32■□□□□ 0.36
SCAMP4-202ENST00000409472 ZNF444Q8N0Y2 327 aaPredicted RBP17.32■□□□□ 0.36
SCAMP4-202ENST00000409472 ANKS1AQ92625 1134 aa17.32■□□□□ 0.36
SCAMP4-202ENST00000409472 STAMQ92783 540 aa17.32■□□□□ 0.36
SCAMP4-202ENST00000409472 GAKO14976 1311 aa17.32■□□□□ 0.36
SCAMP4-202ENST00000409472 TMEM232C9JQI7 657 aa17.32■□□□□ 0.36
SCAMP4-202ENST00000409472 SLURP2P0DP57 97 aa17.32■□□□□ 0.36
SCAMP4-202ENST00000409472 SARSP49591 514 aaKnown RBP17.32■□□□□ 0.36
SCAMP4-202ENST00000409472 ATP2C1P98194 919 aaPredicted RBP17.32■□□□□ 0.36
SCAMP4-202ENST00000409472 C16orf86Q6ZW13 317 aa17.32■□□□□ 0.36
SCAMP4-202ENST00000409472 EYA3Q99504 573 aa17.32■□□□□ 0.36
SCAMP4-202ENST00000409472 SKILP12757 684 aa17.31■□□□□ 0.36
SCAMP4-202ENST00000409472 PICALMQ13492 652 aa17.31■□□□□ 0.36
SCAMP4-202ENST00000409472 MSL1Q68DK7 614 aa17.31■□□□□ 0.36
SCAMP4-202ENST00000409472 AMOTL1Q8IY63 956 aa17.31■□□□□ 0.36
SCAMP4-202ENST00000409472 NRXN2Q9P2S2 1712 aa17.31■□□□□ 0.36
SCAMP4-202ENST00000409472 SMTNL1A8MU46 457 aa17.31■□□□□ 0.36
SCAMP4-202ENST00000409472 MORC3Q14149 939 aa17.31■□□□□ 0.36
SCAMP4-202ENST00000409472 DOK7Q18PE1 504 aa17.31■□□□□ 0.36
SCAMP4-202ENST00000409472 NT5DC1Q5TFE4 455 aa17.31■□□□□ 0.36
SCAMP4-202ENST00000409472 INTS13Q9NVM9 706 aa17.31■□□□□ 0.36
SCAMP4-202ENST00000409472 CDC25AP30304 524 aa17.3■□□□□ 0.36
SCAMP4-202ENST00000409472 GOLGA8FQ08AF8 430 aa17.3■□□□□ 0.36
SCAMP4-202ENST00000409472 GOLGA8DPQ0D2H9 430 aa17.3■□□□□ 0.36
SCAMP4-202ENST00000409472 HEATR3Q7Z4Q2 680 aa17.3■□□□□ 0.36
SCAMP4-202ENST00000409472 ZNF710Q8N1W2 664 aa17.3■□□□□ 0.36
SCAMP4-202ENST00000409472 SMARCE1Q969G3 411 aa17.3■□□□□ 0.36
SCAMP4-202ENST00000409472 CEP95Q96GE4 821 aa17.3■□□□□ 0.36
SCAMP4-202ENST00000409472 OSBPL5Q9H0X9 879 aaPredicted RBP17.3■□□□□ 0.36
SCAMP4-202ENST00000409472 DDX4Q9NQI0 724 aaKnown RBP17.3■□□□□ 0.36
SCAMP4-202ENST00000409472 SRGNP10124 158 aa17.3■□□□□ 0.36
SCAMP4-202ENST00000409472 USP17L2Q6R6M4 530 aa17.3■□□□□ 0.36
SCAMP4-202ENST00000409472 SMYD4Q8IYR2 804 aaPredicted RBP17.3■□□□□ 0.36
SCAMP4-202ENST00000409472 BLIDQ8IZY5 108 aa17.3■□□□□ 0.36
SCAMP4-202ENST00000409472 TCP11L1Q9NUJ3 509 aa17.3■□□□□ 0.36
SCAMP4-202ENST00000409472 ATP6V0A2Q9Y487 856 aa17.3■□□□□ 0.36
SCAMP4-202ENST00000409472 PALM3A6NDB9 673 aaPredicted RBP17.29■□□□□ 0.36
SCAMP4-202ENST00000409472 SP8Q8IXZ3 490 aa17.29■□□□□ 0.36
SCAMP4-202ENST00000409472 SPATA20Q8TB22 786 aa17.29■□□□□ 0.36
SCAMP4-202ENST00000409472 M0R2N6 131 aa17.29■□□□□ 0.36
SCAMP4-202ENST00000409472 STXBP3O00186 592 aa17.29■□□□□ 0.36
SCAMP4-202ENST00000409472 SCNN1DP51172 638 aa17.29■□□□□ 0.36
SCAMP4-202ENST00000409472 ELOA2Q8IYF1 753 aaPredicted RBP17.29■□□□□ 0.36
SCAMP4-202ENST00000409472 AKT1S1Q96B36 256 aa17.29■□□□□ 0.36
SCAMP4-202ENST00000409472 PAGE5Q96GU1 130 aa17.29■□□□□ 0.36
SCAMP4-202ENST00000409472 CD44P16070 742 aaKnown RBP17.28■□□□□ 0.36
SCAMP4-202ENST00000409472 TPM4P67936 248 aa17.28■□□□□ 0.36
SCAMP4-202ENST00000409472 FERMT2Q96AC1 680 aa17.28■□□□□ 0.36
SCAMP4-202ENST00000409472 FAM163AQ96GL9 167 aaPredicted RBP17.28■□□□□ 0.36
SCAMP4-202ENST00000409472 KCNQ5Q9NR82 932 aa17.28■□□□□ 0.36
SCAMP4-202ENST00000409472 TRMT1Q9NXH9 659 aaKnown RBP17.28■□□□□ 0.36
SCAMP4-202ENST00000409472 PCDHA4Q9UN74 947 aa17.28■□□□□ 0.36
SCAMP4-202ENST00000409472 MORC2Q9Y6X9 1032 aaPredicted RBP17.28■□□□□ 0.36
SCAMP4-202ENST00000409472 QSER1Q2KHR3 1735 aa17.28■□□□□ 0.36
SCAMP4-202ENST00000409472 KLRF2D3W0D1 207 aa17.28■□□□□ 0.36
SCAMP4-202ENST00000409472 SERPINC1P01008 464 aa17.28■□□□□ 0.36
SCAMP4-202ENST00000409472 SH3RF1Q7Z6J0 888 aa17.28■□□□□ 0.36
SCAMP4-202ENST00000409472 HOMER1Q86YM7 354 aa17.28■□□□□ 0.36
SCAMP4-202ENST00000409472 C4orf32Q8N8J7 132 aa17.28■□□□□ 0.36
SCAMP4-202ENST00000409472 MTRQ99707 1265 aa17.28■□□□□ 0.36
SCAMP4-202ENST00000409472 PCDHA6Q9UN73 950 aa17.28■□□□□ 0.36
SCAMP4-202ENST00000409472 NFE2L3Q9Y4A8 694 aa17.28■□□□□ 0.36
SCAMP4-202ENST00000409472 PCDHA8Q9Y5H6 950 aa17.28■□□□□ 0.36
SCAMP4-202ENST00000409472 RIOK3O14730 519 aaKnown RBP17.27■□□□□ 0.36
SCAMP4-202ENST00000409472 COBLO75128 1261 aa17.27■□□□□ 0.36
SCAMP4-202ENST00000409472 MMP10P09238 476 aa17.27■□□□□ 0.36
SCAMP4-202ENST00000409472 SLFN14P0C7P3 912 aa17.27■□□□□ 0.36
SCAMP4-202ENST00000409472 EIF6P56537 245 aaKnown RBP17.27■□□□□ 0.36
SCAMP4-202ENST00000409472 UBASH3AP57075 661 aa17.27■□□□□ 0.36
SCAMP4-202ENST00000409472 E2F4Q16254 413 aa17.27■□□□□ 0.36
SCAMP4-202ENST00000409472 CFAP100Q494V2 611 aa17.27■□□□□ 0.36
SCAMP4-202ENST00000409472 NEDD1Q8NHV4 660 aa17.27■□□□□ 0.36
SCAMP4-202ENST00000409472 TBC1D22AQ8WUA7 517 aa17.27■□□□□ 0.36
SCAMP4-202ENST00000409472 BLZF1Q9H2G9 400 aa17.27■□□□□ 0.36
SCAMP4-202ENST00000409472 TMEM60Q9H2L4 133 aa17.27■□□□□ 0.36
SCAMP4-202ENST00000409472 PCDHAC2Q9Y5I4 1007 aa17.27■□□□□ 0.36
SCAMP4-202ENST00000409472 MYH8P13535 1937 aa17.27■□□□□ 0.35
SCAMP4-202ENST00000409472 PP2D1A8MPX8 630 aa17.26■□□□□ 0.35
SCAMP4-202ENST00000409472 TPD52L1Q16890 204 aaPredicted RBP17.26■□□□□ 0.35
SCAMP4-202ENST00000409472 INF2Q27J81 1249 aa17.26■□□□□ 0.35
SCAMP4-202ENST00000409472 SAMSN1Q9NSI8 373 aaKnown RBP17.26■□□□□ 0.35
SCAMP4-202ENST00000409472 HOOK1Q9UJC3 728 aaKnown RBP17.26■□□□□ 0.35
SCAMP4-202ENST00000409472 DPYDQ12882 1025 aa17.26■□□□□ 0.35
SCAMP4-202ENST00000409472 PDCL2Q8N4E4 241 aa17.26■□□□□ 0.35
SCAMP4-202ENST00000409472 BARHL2Q9NY43 387 aa17.26■□□□□ 0.35
SCAMP4-202ENST00000409472 TTF2Q9UNY4 1162 aaKnown RBP17.26■□□□□ 0.35
SCAMP4-202ENST00000409472 USP17L5A8MUK1 530 aa17.25■□□□□ 0.35
SCAMP4-202ENST00000409472 IGSF3O75054 1194 aa17.25■□□□□ 0.35
SCAMP4-202ENST00000409472 APBA3O96018 575 aa17.25■□□□□ 0.35
SCAMP4-202ENST00000409472 AKR1B1P15121 316 aa17.25■□□□□ 0.35
SCAMP4-202ENST00000409472 KLHL10Q6JEL2 608 aa17.25■□□□□ 0.35
SCAMP4-202ENST00000409472 LRRC47Q8N1G4 583 aaKnown RBP17.25■□□□□ 0.35
SCAMP4-202ENST00000409472 UBA5Q9GZZ9 404 aa17.25■□□□□ 0.35
SCAMP4-202ENST00000409472 FRMPD2Q68DX3 1309 aaPredicted RBP17.25■□□□□ 0.35
SCAMP4-202ENST00000409472 BMP15O95972 392 aa17.25■□□□□ 0.35
SCAMP4-202ENST00000409472 TNNT1P13805 278 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms