RNA–Protein interactions for RNA: ENST00000409190.7

SYNC-202, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SYNC, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-202ENST00000409190 RIN2Q8WYP3 895 aaPredicted RBP18.99■□□□□ 0.63
SYNC-202ENST00000409190 COL18A1P39060 1754 aa18.98■□□□□ 0.63
SYNC-202ENST00000409190 MACROD2A1Z1Q3 448 aa18.98■□□□□ 0.63
SYNC-202ENST00000409190 SLAIN2Q9P270 581 aa18.98■□□□□ 0.63
SYNC-202ENST00000409190 ATRNO75882 1429 aa18.98■□□□□ 0.63
SYNC-202ENST00000409190 TTC26A0AVF1 554 aa18.98■□□□□ 0.63
SYNC-202ENST00000409190 HSP90B2PQ58FF3 399 aa18.98■□□□□ 0.63
SYNC-202ENST00000409190 C3orf67Q6ZVT6 689 aa18.98■□□□□ 0.63
SYNC-202ENST00000409190 TRIM47Q96LD4 638 aa18.98■□□□□ 0.63
SYNC-202ENST00000409190 NUP188Q5SRE5 1749 aa18.98■□□□□ 0.63
SYNC-202ENST00000409190 EIF5P55010 431 aaKnown RBP18.98■□□□□ 0.63
SYNC-202ENST00000409190 CYP27A1Q02318 531 aa18.98■□□□□ 0.63
SYNC-202ENST00000409190 TROAPQ12815 778 aa18.98■□□□□ 0.63
SYNC-202ENST00000409190 HDXQ7Z353 690 aa18.98■□□□□ 0.63
SYNC-202ENST00000409190 CAGE1Q8TC20 777 aa18.98■□□□□ 0.63
SYNC-202ENST00000409190 SPEF2Q9C093 1822 aa18.97■□□□□ 0.63
SYNC-202ENST00000409190 RTL9Q8NET4 1388 aa18.97■□□□□ 0.63
SYNC-202ENST00000409190 ERLIN1O75477 346 aa18.97■□□□□ 0.63
SYNC-202ENST00000409190 MATR3P43243 847 aaKnown RBP eCLIP18.97■□□□□ 0.63
SYNC-202ENST00000409190 CCDC122Q5T0U0 273 aa18.97■□□□□ 0.63
SYNC-202ENST00000409190 KIAA1328Q86T90 577 aa18.97■□□□□ 0.63
SYNC-202ENST00000409190 ZNF34Q8IZ26 560 aa18.97■□□□□ 0.63
SYNC-202ENST00000409190 RPN1P04843 607 aaKnown RBP18.97■□□□□ 0.63
SYNC-202ENST00000409190 TCP11X2Q5H9J9 407 aa18.97■□□□□ 0.63
SYNC-202ENST00000409190 CYP26C1Q6V0L0 522 aa18.97■□□□□ 0.63
SYNC-202ENST00000409190 HPS3Q969F9 1004 aa18.97■□□□□ 0.63
SYNC-202ENST00000409190 FERMT2Q96AC1 680 aa18.97■□□□□ 0.63
SYNC-202ENST00000409190 MYO6Q9UM54 1294 aa18.97■□□□□ 0.63
SYNC-202ENST00000409190 EPN1Q9Y6I3 576 aaPredicted RBP18.97■□□□□ 0.63
SYNC-202ENST00000409190 PBX1P40424 430 aa18.96■□□□□ 0.63
SYNC-202ENST00000409190 DNA2P51530 1060 aa18.96■□□□□ 0.63
SYNC-202ENST00000409190 CASP8Q14790 479 aa18.96■□□□□ 0.63
SYNC-202ENST00000409190 BRD3Q15059 726 aa18.96■□□□□ 0.63
SYNC-202ENST00000409190 TSR1Q2NL82 804 aaKnown RBP18.96■□□□□ 0.63
SYNC-202ENST00000409190 TMTC1Q8IUR5 882 aa18.96■□□□□ 0.63
SYNC-202ENST00000409190 TTF2Q9UNY4 1162 aaKnown RBP18.96■□□□□ 0.63
SYNC-202ENST00000409190 DUSP10Q9Y6W6 482 aa18.96■□□□□ 0.63
SYNC-202ENST00000409190 LMTK3Q96Q04 1460 aa18.96■□□□□ 0.63
SYNC-202ENST00000409190 EXOC5O00471 708 aa18.96■□□□□ 0.63
SYNC-202ENST00000409190 PRPF3O43395 683 aaKnown RBP18.96■□□□□ 0.63
SYNC-202ENST00000409190 PPARDQ03181 441 aa18.96■□□□□ 0.63
SYNC-202ENST00000409190 FUT2Q10981 343 aa18.96■□□□□ 0.63
SYNC-202ENST00000409190 UIMC1Q96RL1 719 aa18.96■□□□□ 0.63
SYNC-202ENST00000409190 B4DLN1 442 aa18.96■□□□□ 0.63
SYNC-202ENST00000409190 ZNF185O15231 689 aa18.96■□□□□ 0.63
SYNC-202ENST00000409190 GOLGA8HP0CJ92 632 aa18.96■□□□□ 0.63
SYNC-202ENST00000409190 ARHGAP25P42331 645 aa18.96■□□□□ 0.63
SYNC-202ENST00000409190 CTR9Q6PD62 1173 aa18.96■□□□□ 0.63
SYNC-202ENST00000409190 TMTC3Q6ZXV5 915 aa18.96■□□□□ 0.63
SYNC-202ENST00000409190 SH3RF1Q7Z6J0 888 aa18.96■□□□□ 0.63
SYNC-202ENST00000409190 GNL3LQ9NVN8 582 aaKnown RBP18.96■□□□□ 0.63
SYNC-202ENST00000409190 LAMB4A4D0S4 1761 aa18.95■□□□□ 0.62
SYNC-202ENST00000409190 ATP1A1P05023 1023 aaKnown RBP18.95■□□□□ 0.62
SYNC-202ENST00000409190 PARP1P09874 1014 aaKnown RBP18.95■□□□□ 0.62
SYNC-202ENST00000409190 NPY5RQ15761 445 aa18.95■□□□□ 0.62
SYNC-202ENST00000409190 STAG2Q8N3U4 1231 aa18.95■□□□□ 0.62
SYNC-202ENST00000409190 NAA15Q9BXJ9 866 aaKnown RBP18.95■□□□□ 0.62
SYNC-202ENST00000409190 FAM205AQ6ZU69 1335 aa18.95■□□□□ 0.62
SYNC-202ENST00000409190 PNPLA7Q6ZV29 1317 aa18.95■□□□□ 0.62
SYNC-202ENST00000409190 LRRIQ3A6PVS8 624 aaPredicted RBP18.95■□□□□ 0.62
SYNC-202ENST00000409190 TRIM21P19474 475 aaKnown RBP18.95■□□□□ 0.62
SYNC-202ENST00000409190 CRKLP46109 303 aaKnown RBP18.95■□□□□ 0.62
SYNC-202ENST00000409190 INF2Q27J81 1249 aa18.95■□□□□ 0.62
SYNC-202ENST00000409190 CCDC178Q5BJE1 867 aa18.95■□□□□ 0.62
SYNC-202ENST00000409190 LEKR1Q6ZMV7 388 aa18.95■□□□□ 0.62
SYNC-202ENST00000409190 SLC51AQ86UW1 340 aa18.95■□□□□ 0.62
SYNC-202ENST00000409190 LUC7L2Q9Y383 392 aaKnown RBP18.95■□□□□ 0.62
SYNC-202ENST00000409190 TNS2Q63HR2 1409 aa18.95■□□□□ 0.62
SYNC-202ENST00000409190 MYH7P12883 1935 aa18.95■□□□□ 0.62
SYNC-202ENST00000409190 GOLGB1Q14789 3259 aaKnown RBP18.95■□□□□ 0.62
SYNC-202ENST00000409190 SCG2P13521 617 aa18.95■□□□□ 0.62
SYNC-202ENST00000409190 PRDX5P30044 214 aa18.95■□□□□ 0.62
SYNC-202ENST00000409190 HEATR3Q7Z4Q2 680 aa18.95■□□□□ 0.62
SYNC-202ENST00000409190 AGPAT5Q9NUQ2 364 aa18.95■□□□□ 0.62
SYNC-202ENST00000409190 NDUFA10O95299 355 aa18.94■□□□□ 0.62
SYNC-202ENST00000409190 ATP2C1P98194 919 aaPredicted RBP18.94■□□□□ 0.62
SYNC-202ENST00000409190 SMCR8Q8TEV9 937 aaPredicted RBP18.94■□□□□ 0.62
SYNC-202ENST00000409190 DYNLL2Q96FJ2 89 aa18.94■□□□□ 0.62
SYNC-202ENST00000409190 MMS19Q96T76 1030 aa18.94■□□□□ 0.62
SYNC-202ENST00000409190 VAT1LQ9HCJ6 419 aa18.94■□□□□ 0.62
SYNC-202ENST00000409190 JADE2Q9NQC1 790 aa18.94■□□□□ 0.62
SYNC-202ENST00000409190 RSPH14Q9UHP6 348 aa18.94■□□□□ 0.62
SYNC-202ENST00000409190 RIOK1Q9BRS2 568 aaKnown RBP18.94■□□□□ 0.62
SYNC-202ENST00000409190 MCM9Q9NXL9 1143 aa18.94■□□□□ 0.62
SYNC-202ENST00000409190 REXO2Q9Y3B8 237 aaKnown RBP18.94■□□□□ 0.62
SYNC-202ENST00000409190 NKRFO15226 690 aaKnown RBP eCLIP18.93■□□□□ 0.62
SYNC-202ENST00000409190 ATP8B1O43520 1251 aa18.93■□□□□ 0.62
SYNC-202ENST00000409190 IL6STP40189 918 aaPredicted RBP18.93■□□□□ 0.62
SYNC-202ENST00000409190 CAVIN4Q5BKX8 364 aa18.93■□□□□ 0.62
SYNC-202ENST00000409190 ZNF384Q8TF68 577 aa18.93■□□□□ 0.62
SYNC-202ENST00000409190 UBXN6Q9BZV1 441 aa18.93■□□□□ 0.62
SYNC-202ENST00000409190 TMEM60Q9H2L4 133 aa18.93■□□□□ 0.62
SYNC-202ENST00000409190 STX8Q9UNK0 236 aa18.93■□□□□ 0.62
SYNC-202ENST00000409190 USP17L8P0C7I0 530 aa18.93■□□□□ 0.62
SYNC-202ENST00000409190 UBA7P41226 1012 aa18.93■□□□□ 0.62
SYNC-202ENST00000409190 L1RE1Q9UN81 338 aa18.93■□□□□ 0.62
SYNC-202ENST00000409190 EIF3JO75822 258 aaKnown RBP18.93■□□□□ 0.62
SYNC-202ENST00000409190 PDXDC2PQ6P474 469 aa18.93■□□□□ 0.62
SYNC-202ENST00000409190 CNTNAP5Q8WYK1 1306 aa18.93■□□□□ 0.62
SYNC-202ENST00000409190 CCDC194A0A1B0GVG4 234 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms