RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 HSP90B1P14625 803 aaKnown RBP7.46□□□□□ -1.22
HMGB1P13-201ENST00000406019 RBL2Q08999 1139 aa7.46□□□□□ -1.22
HMGB1P13-201ENST00000406019 NMIQ13287 307 aaPredicted RBP7.46□□□□□ -1.22
HMGB1P13-201ENST00000406019 RALGPS1Q5JS13 557 aa7.46□□□□□ -1.22
HMGB1P13-201ENST00000406019 SYTL5Q8TDW5 730 aaPredicted RBP7.46□□□□□ -1.22
HMGB1P13-201ENST00000406019 ALPK1Q96QP1 1244 aa7.46□□□□□ -1.22
HMGB1P13-201ENST00000406019 SUCOQ9UBS9 1254 aaKnown RBP7.46□□□□□ -1.22
HMGB1P13-201ENST00000406019 INPP5FQ9Y2H2 1132 aa7.46□□□□□ -1.22
HMGB1P13-201ENST00000406019 PCDHA11Q9Y5I1 949 aa7.46□□□□□ -1.22
HMGB1P13-201ENST00000406019 HMGB1P09429 215 aaKnown RBP7.45□□□□□ -1.22
HMGB1P13-201ENST00000406019 GUCY2CP25092 1073 aa7.45□□□□□ -1.22
HMGB1P13-201ENST00000406019 PMS1P54277 932 aaKnown RBP7.45□□□□□ -1.22
HMGB1P13-201ENST00000406019 TEKQ02763 1124 aa7.45□□□□□ -1.22
HMGB1P13-201ENST00000406019 CREG2Q8IUH2 290 aa7.45□□□□□ -1.22
HMGB1P13-201ENST00000406019 ENOX1Q8TC92 643 aaKnown RBP7.45□□□□□ -1.22
HMGB1P13-201ENST00000406019 DHX38Q92620 1227 aaKnown RBP7.45□□□□□ -1.22
HMGB1P13-201ENST00000406019 DNAJC2Q99543 621 aaKnown RBP7.45□□□□□ -1.22
HMGB1P13-201ENST00000406019 LNPKQ9C0E8 428 aa7.45□□□□□ -1.22
HMGB1P13-201ENST00000406019 PRDM14Q9GZV8 571 aa7.45□□□□□ -1.22
HMGB1P13-201ENST00000406019 DUSP13Q9UII6 198 aa7.45□□□□□ -1.22
HMGB1P13-201ENST00000406019 LTBP3Q9NS15 1303 aa7.45□□□□□ -1.22
HMGB1P13-201ENST00000406019 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.44□□□□□ -1.22
HMGB1P13-201ENST00000406019 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.44□□□□□ -1.22
HMGB1P13-201ENST00000406019 DNAJA1P31689 397 aaKnown RBP7.44□□□□□ -1.22
HMGB1P13-201ENST00000406019 GDNFP39905 211 aa7.44□□□□□ -1.22
HMGB1P13-201ENST00000406019 NASPP49321 788 aaPredicted RBP7.44□□□□□ -1.22
HMGB1P13-201ENST00000406019 ARID5AQ03989 594 aa7.44□□□□□ -1.22
HMGB1P13-201ENST00000406019 FYB2Q5VWT5 728 aa7.44□□□□□ -1.22
HMGB1P13-201ENST00000406019 UNC5AQ6ZN44 842 aa7.44□□□□□ -1.22
HMGB1P13-201ENST00000406019 C19orf47Q8N9M1 422 aaKnown RBP7.44□□□□□ -1.22
HMGB1P13-201ENST00000406019 SEC16BQ96JE7 1060 aa7.44□□□□□ -1.22
HMGB1P13-201ENST00000406019 G6PC3Q9BUM1 346 aa7.44□□□□□ -1.22
HMGB1P13-201ENST00000406019 EBF1Q9UH73 591 aa7.44□□□□□ -1.22
HMGB1P13-201ENST00000406019 SIGLEC6O43699 453 aa7.43□□□□□ -1.22
HMGB1P13-201ENST00000406019 PRAMEF1O95521 474 aa7.43□□□□□ -1.22
HMGB1P13-201ENST00000406019 EGR3Q06889 387 aa7.43□□□□□ -1.22
HMGB1P13-201ENST00000406019 GIMAP6Q6P9H5 292 aa7.43□□□□□ -1.22
HMGB1P13-201ENST00000406019 FAM169BQ8N8A8 192 aa7.43□□□□□ -1.22
HMGB1P13-201ENST00000406019 DAGLBQ8NCG7 672 aa7.43□□□□□ -1.22
HMGB1P13-201ENST00000406019 KRTAP4-12Q9BQ66 201 aa7.43□□□□□ -1.22
HMGB1P13-201ENST00000406019 SRRTQ9BXP5 876 aaKnown RBP7.43□□□□□ -1.22
HMGB1P13-201ENST00000406019 SLAMF8Q9P0V8 285 aa7.43□□□□□ -1.22
HMGB1P13-201ENST00000406019 FAM86C2PA6NEL3 165 aa7.42□□□□□ -1.22
HMGB1P13-201ENST00000406019 FGRP09769 529 aa7.42□□□□□ -1.22
HMGB1P13-201ENST00000406019 ZGLP1P0C6A0 271 aa7.42□□□□□ -1.22
HMGB1P13-201ENST00000406019 ATF4P18848 351 aaPredicted RBP7.42□□□□□ -1.22
HMGB1P13-201ENST00000406019 GTF2F1P35269 517 aaKnown RBP eCLIP7.42□□□□□ -1.22
HMGB1P13-201ENST00000406019 BBS9Q3SYG4 887 aa7.42□□□□□ -1.22
HMGB1P13-201ENST00000406019 NOP9Q86U38 636 aaKnown RBP7.42□□□□□ -1.22
HMGB1P13-201ENST00000406019 MCF2L2Q86YR7 1114 aa7.42□□□□□ -1.22
HMGB1P13-201ENST00000406019 USHBP1Q8N6Y0 703 aa7.42□□□□□ -1.22
HMGB1P13-201ENST00000406019 ADAMTS10Q9H324 1103 aa7.42□□□□□ -1.22
HMGB1P13-201ENST00000406019 PRR13Q9NZ81 148 aa7.42□□□□□ -1.22
HMGB1P13-201ENST00000406019 TMEM59LQ9UK28 342 aa7.42□□□□□ -1.22
HMGB1P13-201ENST00000406019 ZNF214Q9UL59 606 aaPredicted RBP7.42□□□□□ -1.22
HMGB1P13-201ENST00000406019 MINPP1Q9UNW1 487 aa7.42□□□□□ -1.22
HMGB1P13-201ENST00000406019 KRTAP9-6A0A140TA67 174 aa7.41□□□□□ -1.22
HMGB1P13-201ENST00000406019 A0A1W2PQH9 124 aa7.41□□□□□ -1.22
HMGB1P13-201ENST00000406019 TMEM82A0PJX8 343 aa7.41□□□□□ -1.22
HMGB1P13-201ENST00000406019 HPXP02790 462 aa7.41□□□□□ -1.22
HMGB1P13-201ENST00000406019 CTSKP43235 329 aa7.41□□□□□ -1.22
HMGB1P13-201ENST00000406019 CEBPAP49715 358 aaPredicted RBP7.41□□□□□ -1.22
HMGB1P13-201ENST00000406019 EIF6P56537 245 aaKnown RBP7.41□□□□□ -1.22
HMGB1P13-201ENST00000406019 AUHQ13825 339 aaKnown RBP7.41□□□□□ -1.22
HMGB1P13-201ENST00000406019 AXDND1Q5T1B0 1012 aaPredicted RBP7.41□□□□□ -1.22
HMGB1P13-201ENST00000406019 TCTN2Q96GX1 697 aa7.41□□□□□ -1.22
HMGB1P13-201ENST00000406019 BIN1O00499 593 aa7.4□□□□□ -1.22
HMGB1P13-201ENST00000406019 ERVFC1P60507 584 aa7.4□□□□□ -1.22
HMGB1P13-201ENST00000406019 ANKRD39Q53RE8 183 aa7.4□□□□□ -1.22
HMGB1P13-201ENST00000406019 TDRD10Q5VZ19 366 aaKnown RBP7.4□□□□□ -1.22
HMGB1P13-201ENST00000406019 FBXW10Q5XX13 1052 aa7.4□□□□□ -1.22
HMGB1P13-201ENST00000406019 TTC6Q86TZ1 520 aa7.4□□□□□ -1.22
HMGB1P13-201ENST00000406019 KRTAP19-1Q8IUB9 90 aa7.4□□□□□ -1.22
HMGB1P13-201ENST00000406019 C7orf61Q8IZ16 206 aa7.4□□□□□ -1.22
HMGB1P13-201ENST00000406019 ZNF655Q8N720 491 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P13-201ENST00000406019 OR6P1Q8NGX9 317 aa7.4□□□□□ -1.22
HMGB1P13-201ENST00000406019 LINC01599Q8WXQ3 324 aa7.4□□□□□ -1.22
HMGB1P13-201ENST00000406019 ASIC4Q96FT7 647 aa7.4□□□□□ -1.22
HMGB1P13-201ENST00000406019 DHRS1Q96LJ7 313 aa7.4□□□□□ -1.22
HMGB1P13-201ENST00000406019 ZNF503-AS2A6NEH8 195 aa7.39□□□□□ -1.23
HMGB1P13-201ENST00000406019 NOTOA8MTQ0 251 aa7.39□□□□□ -1.23
HMGB1P13-201ENST00000406019 PAX4O43316 350 aa7.39□□□□□ -1.23
HMGB1P13-201ENST00000406019 CBFA2T2O43439 604 aa7.39□□□□□ -1.23
HMGB1P13-201ENST00000406019 LTKP29376 864 aa7.39□□□□□ -1.23
HMGB1P13-201ENST00000406019 CASP7P55210 303 aa7.39□□□□□ -1.23
HMGB1P13-201ENST00000406019 CCDC144BQ3MJ40 725 aa7.39□□□□□ -1.23
HMGB1P13-201ENST00000406019 RNF111Q6ZNA4 994 aa7.39□□□□□ -1.23
HMGB1P13-201ENST00000406019 VPS37DQ86XT2 251 aa7.39□□□□□ -1.23
HMGB1P13-201ENST00000406019 LINC00116Q8NCU8 138 aa7.39□□□□□ -1.23
HMGB1P13-201ENST00000406019 KLHL6Q8WZ60 621 aa7.39□□□□□ -1.23
HMGB1P13-201ENST00000406019 FAM168AQ92567 244 aa7.39□□□□□ -1.23
HMGB1P13-201ENST00000406019 SMARCC1Q92922 1105 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P13-201ENST00000406019 MKRN2Q9H000 416 aaKnown RBP7.39□□□□□ -1.23
HMGB1P13-201ENST00000406019 GFOD1Q9NXC2 390 aa7.39□□□□□ -1.23
HMGB1P13-201ENST00000406019 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.39□□□□□ -1.23
HMGB1P13-201ENST00000406019 RNF114Q9Y508 228 aa7.39□□□□□ -1.23
HMGB1P13-201ENST00000406019 EFEMP2O95967 443 aa7.38□□□□□ -1.23
HMGB1P13-201ENST00000406019 DCAF15Q66K64 600 aa7.38□□□□□ -1.23
HMGB1P13-201ENST00000406019 ZSWIM9Q86XI8 627 aa7.38□□□□□ -1.23
HMGB1P13-201ENST00000406019 HIRIP3Q9BW71 556 aaPredicted RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms