RNA–Protein interactions for RNA: ENST00000403506.1

CLHC1-202, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 5

Gene CLHC1, Length 430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-202ENST00000403506 ATG4CQ96DT6 458 aa12.88□□□□□ -0.35
CLHC1-202ENST00000403506 CNNM2Q9H8M5 875 aa12.88□□□□□ -0.35
CLHC1-202ENST00000403506 FBXO28Q9NVF7 368 aa12.88□□□□□ -0.35
CLHC1-202ENST00000403506 HOXC10Q9NYD6 342 aa12.88□□□□□ -0.35
CLHC1-202ENST00000403506 DOCK3Q8IZD9 2030 aa12.88□□□□□ -0.35
CLHC1-202ENST00000403506 GREB1LQ9C091 1923 aaPredicted RBP12.88□□□□□ -0.35
CLHC1-202ENST00000403506 FLOT1O75955 427 aa12.87□□□□□ -0.35
CLHC1-202ENST00000403506 HMGCRP04035 888 aa12.87□□□□□ -0.35
CLHC1-202ENST00000403506 FGRP09769 529 aa12.87□□□□□ -0.35
CLHC1-202ENST00000403506 DSG3P32926 999 aa12.87□□□□□ -0.35
CLHC1-202ENST00000403506 CCNA1P78396 465 aa12.87□□□□□ -0.35
CLHC1-202ENST00000403506 CTDSPL2Q05D32 466 aa12.87□□□□□ -0.35
CLHC1-202ENST00000403506 COG2Q14746 738 aa12.87□□□□□ -0.35
CLHC1-202ENST00000403506 FAM47AQ5JRC9 791 aa12.87□□□□□ -0.35
CLHC1-202ENST00000403506 UBE2Q1Q7Z7E8 422 aa12.87□□□□□ -0.35
CLHC1-202ENST00000403506 MB21D1Q8N884 522 aa12.87□□□□□ -0.35
CLHC1-202ENST00000403506 U2AF1L4Q8WU68 220 aaKnown RBP12.87□□□□□ -0.35
CLHC1-202ENST00000403506 STAG1Q8WVM7 1258 aa12.87□□□□□ -0.35
CLHC1-202ENST00000403506 NUP88Q99567 741 aaPredicted RBP12.87□□□□□ -0.35
CLHC1-202ENST00000403506 NUDT12Q9BQG2 462 aa12.87□□□□□ -0.35
CLHC1-202ENST00000403506 MOV10L1Q9BXT6 1211 aaKnown RBP12.87□□□□□ -0.35
CLHC1-202ENST00000403506 PAK6Q9NQU5 681 aaPredicted RBP12.87□□□□□ -0.35
CLHC1-202ENST00000403506 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.87□□□□□ -0.35
CLHC1-202ENST00000403506 RLFQ13129 1914 aa12.86□□□□□ -0.35
CLHC1-202ENST00000403506 EIF5BO60841 1220 aaKnown RBP12.86□□□□□ -0.35
CLHC1-202ENST00000403506 TFAP4Q01664 338 aa12.86□□□□□ -0.35
CLHC1-202ENST00000403506 FAM83BQ5T0W9 1011 aa12.86□□□□□ -0.35
CLHC1-202ENST00000403506 AKNAD1Q5T1N1 836 aa12.86□□□□□ -0.35
CLHC1-202ENST00000403506 CCAR1Q8IX12 1150 aaKnown RBP12.86□□□□□ -0.35
CLHC1-202ENST00000403506 SOCS4Q8WXH5 440 aa12.86□□□□□ -0.35
CLHC1-202ENST00000403506 ESR2Q92731 530 aa12.86□□□□□ -0.35
CLHC1-202ENST00000403506 MKL1Q969V6 931 aa12.86□□□□□ -0.35
CLHC1-202ENST00000403506 CEP95Q96GE4 821 aa12.86□□□□□ -0.35
CLHC1-202ENST00000403506 TTC14Q96N46 770 aa12.86□□□□□ -0.35
CLHC1-202ENST00000403506 DEFB118Q96PH6 123 aa12.86□□□□□ -0.35
CLHC1-202ENST00000403506 KRT23Q9C075 422 aa12.86□□□□□ -0.35
CLHC1-202ENST00000403506 TOMM22Q9NS69 142 aa12.86□□□□□ -0.35
CLHC1-202ENST00000403506 MTMR4Q9NYA4 1195 aa12.86□□□□□ -0.35
CLHC1-202ENST00000403506 FLRT1Q9NZU1 646 aa12.86□□□□□ -0.35
CLHC1-202ENST00000403506 ADAMTS5Q9UNA0 930 aa12.86□□□□□ -0.35
CLHC1-202ENST00000403506 U3KPZ7 1027 aaPredicted RBP12.86□□□□□ -0.35
CLHC1-202ENST00000403506 A0A0G2JMZ2 1700 aa12.85□□□□□ -0.35
CLHC1-202ENST00000403506 SGSM2O43147 1006 aa12.85□□□□□ -0.35
CLHC1-202ENST00000403506 RAD21O60216 631 aa12.85□□□□□ -0.35
CLHC1-202ENST00000403506 RANBP6O60518 1105 aaKnown RBP12.85□□□□□ -0.35
CLHC1-202ENST00000403506 NDUFB10O96000 172 aa12.85□□□□□ -0.35
CLHC1-202ENST00000403506 FDX1P10109 184 aa12.85□□□□□ -0.35
CLHC1-202ENST00000403506 XRCC5P13010 732 aaKnown RBP12.85□□□□□ -0.35
CLHC1-202ENST00000403506 PTPREP23469 700 aa12.85□□□□□ -0.35
CLHC1-202ENST00000403506 TRDNQ13061 729 aa12.85□□□□□ -0.35
CLHC1-202ENST00000403506 MAP3K21Q5TCX8 1036 aa12.85□□□□□ -0.35
CLHC1-202ENST00000403506 WDR78Q5VTH9 848 aa12.85□□□□□ -0.35
CLHC1-202ENST00000403506 SAMD1Q6SPF0 538 aaPredicted RBP12.85□□□□□ -0.35
CLHC1-202ENST00000403506 IQCA1Q86XH1 822 aa12.85□□□□□ -0.35
CLHC1-202ENST00000403506 GMCL1P1Q8NEA9 526 aa12.85□□□□□ -0.35
CLHC1-202ENST00000403506 NKX2-3Q8TAU0 364 aa12.85□□□□□ -0.35
CLHC1-202ENST00000403506 SPATC1LQ9H0A9 340 aa12.85□□□□□ -0.35
CLHC1-202ENST00000403506 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.85□□□□□ -0.35
CLHC1-202ENST00000403506 TCP11L1Q9NUJ3 509 aa12.85□□□□□ -0.35
CLHC1-202ENST00000403506 CLIP2Q9UDT6 1046 aa12.85□□□□□ -0.35
CLHC1-202ENST00000403506 SLC15A5A6NIM6 579 aa12.84□□□□□ -0.35
CLHC1-202ENST00000403506 F5H6K3 240 aa12.84□□□□□ -0.35
CLHC1-202ENST00000403506 NMT2O60551 498 aa12.84□□□□□ -0.35
CLHC1-202ENST00000403506 SGPL1O95470 568 aa12.84□□□□□ -0.35
CLHC1-202ENST00000403506 IGHA2P01877 340 aa12.84□□□□□ -0.35
CLHC1-202ENST00000403506 PRKAR2AP13861 404 aaKnown RBP12.84□□□□□ -0.35
CLHC1-202ENST00000403506 ERCC3P19447 782 aa12.84□□□□□ -0.35
CLHC1-202ENST00000403506 COPB2P35606 906 aa12.84□□□□□ -0.35
CLHC1-202ENST00000403506 RGS2P41220 211 aa12.84□□□□□ -0.35
CLHC1-202ENST00000403506 KLRC3Q07444 240 aa12.84□□□□□ -0.35
CLHC1-202ENST00000403506 MAP2K5Q13163 448 aa12.84□□□□□ -0.35
CLHC1-202ENST00000403506 GRB14Q14449 540 aa12.84□□□□□ -0.35
CLHC1-202ENST00000403506 TMEM132BQ14DG7 1078 aa12.84□□□□□ -0.35
CLHC1-202ENST00000403506 PRPF38BQ5VTL8 546 aaKnown RBP12.84□□□□□ -0.35
CLHC1-202ENST00000403506 LRRC47Q8N1G4 583 aaKnown RBP12.84□□□□□ -0.35
CLHC1-202ENST00000403506 REPS2Q8NFH8 660 aa12.84□□□□□ -0.35
CLHC1-202ENST00000403506 APBA2Q99767 749 aa12.84□□□□□ -0.35
CLHC1-202ENST00000403506 NBPF3Q9H094 633 aa12.84□□□□□ -0.35
CLHC1-202ENST00000403506 CRISPLD2Q9H0B8 497 aa12.84□□□□□ -0.35
CLHC1-202ENST00000403506 IL17RBQ9NRM6 502 aa12.84□□□□□ -0.35
CLHC1-202ENST00000403506 PPP1R9AQ9ULJ8 1098 aa12.84□□□□□ -0.35
CLHC1-202ENST00000403506 VWA5AO00534 786 aa12.83□□□□□ -0.36
CLHC1-202ENST00000403506 ZKSCAN1P17029 563 aaPredicted RBP12.83□□□□□ -0.36
CLHC1-202ENST00000403506 CACNB2Q08289 660 aaPredicted RBP12.83□□□□□ -0.36
CLHC1-202ENST00000403506 PLS1Q14651 629 aa12.83□□□□□ -0.36
CLHC1-202ENST00000403506 RCSD1Q6JBY9 416 aa12.83□□□□□ -0.36
CLHC1-202ENST00000403506 RASGRP2Q7LDG7 609 aa12.83□□□□□ -0.36
CLHC1-202ENST00000403506 NPLOC4Q8TAT6 608 aa12.83□□□□□ -0.36
CLHC1-202ENST00000403506 IL25Q9H293 177 aa12.83□□□□□ -0.36
CLHC1-202ENST00000403506 RPTORQ8N122 1335 aa12.83□□□□□ -0.36
CLHC1-202ENST00000403506 COBLO75128 1261 aa12.82□□□□□ -0.36
CLHC1-202ENST00000403506 CDC45O75419 566 aa12.82□□□□□ -0.36
CLHC1-202ENST00000403506 FARP2O94887 1054 aaPredicted RBP12.82□□□□□ -0.36
CLHC1-202ENST00000403506 HOXC6P09630 235 aa12.82□□□□□ -0.36
CLHC1-202ENST00000403506 CAPN2P17655 700 aa12.82□□□□□ -0.36
CLHC1-202ENST00000403506 CCND3P30281 292 aaPredicted RBP12.82□□□□□ -0.36
CLHC1-202ENST00000403506 MNX1P50219 401 aaPredicted RBP12.82□□□□□ -0.36
CLHC1-202ENST00000403506 RNF20Q5VTR2 975 aa12.82□□□□□ -0.36
CLHC1-202ENST00000403506 TBC1D10CQ8IV04 446 aa12.82□□□□□ -0.36
CLHC1-202ENST00000403506 SHCBP1Q8NEM2 672 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms