RNA–Protein interactions for RNA: ENST00000401447.1

RPA3-203, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 414 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-203ENST00000401447 VPS37DQ86XT2 251 aa5.67□□□□□ -1.5
RPA3-203ENST00000401447 WFDC3Q8IUB2 231 aa5.67□□□□□ -1.5
RPA3-203ENST00000401447 TAB3Q8N5C8 712 aaPredicted RBP5.67□□□□□ -1.5
RPA3-203ENST00000401447 RBBP8NLQ8NC74 664 aaPredicted RBP5.67□□□□□ -1.5
RPA3-203ENST00000401447 OR6P1Q8NGX9 317 aa5.67□□□□□ -1.5
RPA3-203ENST00000401447 PI4K2BQ8TCG2 481 aa5.67□□□□□ -1.5
RPA3-203ENST00000401447 UBE2FQ969M7 185 aa5.67□□□□□ -1.5
RPA3-203ENST00000401447 SEC16BQ96JE7 1060 aa5.67□□□□□ -1.5
RPA3-203ENST00000401447 DHRS1Q96LJ7 313 aa5.67□□□□□ -1.5
RPA3-203ENST00000401447 SRRTQ9BXP5 876 aaKnown RBP5.67□□□□□ -1.5
RPA3-203ENST00000401447 SEMA3GQ9NS98 782 aa5.67□□□□□ -1.5
RPA3-203ENST00000401447 KDM6BO15054 1643 aa5.66□□□□□ -1.5
RPA3-203ENST00000401447 ADGRL1O94910 1474 aa5.66□□□□□ -1.5
RPA3-203ENST00000401447 LTKP29376 864 aa5.66□□□□□ -1.5
RPA3-203ENST00000401447 ZNF792Q3KQV3 632 aa5.66□□□□□ -1.5
RPA3-203ENST00000401447 SLC23A3Q6PIS1 610 aa5.66□□□□□ -1.5
RPA3-203ENST00000401447 SLC9A7Q96T83 725 aa5.66□□□□□ -1.5
RPA3-203ENST00000401447 GPR62Q9BZJ7 368 aa5.66□□□□□ -1.5
RPA3-203ENST00000401447 CARS2Q9HA77 564 aaKnown RBP5.66□□□□□ -1.5
RPA3-203ENST00000401447 RC3H2Q9HBD1 1191 aaKnown RBP5.66□□□□□ -1.5
RPA3-203ENST00000401447 LMCD1Q9NZU5 365 aa5.66□□□□□ -1.5
RPA3-203ENST00000401447 DUSP13Q9UII6 198 aa5.66□□□□□ -1.5
RPA3-203ENST00000401447 SLC12A7Q9Y666 1083 aa5.66□□□□□ -1.5
RPA3-203ENST00000401447 ABCC8Q09428 1581 aa5.65□□□□□ -1.5
RPA3-203ENST00000401447 LRRN2O75325 713 aa5.65□□□□□ -1.5
RPA3-203ENST00000401447 YBX3P16989 372 aaKnown RBP eCLIP5.65□□□□□ -1.52e-8■■□□□ 13.2
RPA3-203ENST00000401447 TPP2P29144 1249 aaPredicted RBP5.65□□□□□ -1.5
RPA3-203ENST00000401447 NBPF12Q5TAG4 269 aaPredicted RBP5.65□□□□□ -1.5
RPA3-203ENST00000401447 INTS3Q68E01 1043 aaKnown RBP5.65□□□□□ -1.5
RPA3-203ENST00000401447 ZNF512BQ96KM6 892 aaPredicted RBP5.65□□□□□ -1.5
RPA3-203ENST00000401447 TOPBP1Q92547 1522 aa5.64□□□□□ -1.51
RPA3-203ENST00000401447 SSBP05455 408 aaKnown RBP eCLIP5.64□□□□□ -1.51
RPA3-203ENST00000401447 ACRP10323 421 aa5.64□□□□□ -1.51
RPA3-203ENST00000401447 NMIQ13287 307 aaPredicted RBP5.64□□□□□ -1.51
RPA3-203ENST00000401447 BBS9Q3SYG4 887 aa5.64□□□□□ -1.51
RPA3-203ENST00000401447 TSPYL5Q86VY4 417 aaPredicted RBP5.64□□□□□ -1.51
RPA3-203ENST00000401447 CREG2Q8IUH2 290 aa5.64□□□□□ -1.51
RPA3-203ENST00000401447 TMEM192Q8IY95 271 aa5.64□□□□□ -1.51
RPA3-203ENST00000401447 SMARCC1Q92922 1105 aaPredicted RBP5.64□□□□□ -1.51
RPA3-203ENST00000401447 SYTL4Q96C24 671 aaPredicted RBP5.64□□□□□ -1.51
RPA3-203ENST00000401447 CCDC120Q96HB5 630 aa5.64□□□□□ -1.51
RPA3-203ENST00000401447 DUSP15Q9H1R2 295 aaPredicted RBP5.64□□□□□ -1.51
RPA3-203ENST00000401447 SUCOQ9UBS9 1254 aaKnown RBP5.64□□□□□ -1.51
RPA3-203ENST00000401447 ADGRE2Q9UHX3 823 aa5.64□□□□□ -1.51
RPA3-203ENST00000401447 RNF114Q9Y508 228 aa5.64□□□□□ -1.51
RPA3-203ENST00000401447 PCDHB12Q9Y5F1 795 aa5.64□□□□□ -1.51
RPA3-203ENST00000401447 ABCC10Q5T3U5 1492 aa5.64□□□□□ -1.51
RPA3-203ENST00000401447 BIN1O00499 593 aa5.63□□□□□ -1.51
RPA3-203ENST00000401447 RNASE1P07998 156 aaKnown RBP5.63□□□□□ -1.51
RPA3-203ENST00000401447 SRFP11831 508 aa5.63□□□□□ -1.51
RPA3-203ENST00000401447 ATF4P18848 351 aaPredicted RBP5.63□□□□□ -1.51
RPA3-203ENST00000401447 GIPRP48546 466 aa5.63□□□□□ -1.51
RPA3-203ENST00000401447 PMS1P54277 932 aaKnown RBP5.63□□□□□ -1.51
RPA3-203ENST00000401447 RUFY4Q6ZNE9 571 aa5.63□□□□□ -1.51
RPA3-203ENST00000401447 CCDC144CPQ8IYA2 1237 aa5.63□□□□□ -1.51
RPA3-203ENST00000401447 C19orf47Q8N9M1 422 aaKnown RBP5.63□□□□□ -1.51
RPA3-203ENST00000401447 ANAPC16Q96DE5 110 aa5.63□□□□□ -1.51
RPA3-203ENST00000401447 VWCEQ96DN2 955 aa5.63□□□□□ -1.51
RPA3-203ENST00000401447 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.63□□□□□ -1.517e-6■■□□□ 11.5
RPA3-203ENST00000401447 PRDM7Q9NQW5 492 aa5.63□□□□□ -1.51
RPA3-203ENST00000401447 MBNL3Q9NUK0 354 aaKnown RBP5.63□□□□□ -1.51
RPA3-203ENST00000401447 ADAMTS6Q9UKP5 1117 aa5.63□□□□□ -1.51
RPA3-203ENST00000401447 SHISA3A0PJX4 238 aa5.62□□□□□ -1.51
RPA3-203ENST00000401447 ARID5AQ03989 594 aa5.62□□□□□ -1.51
RPA3-203ENST00000401447 EGR3Q06889 387 aa5.62□□□□□ -1.51
RPA3-203ENST00000401447 PPP2R5EQ16537 467 aa5.62□□□□□ -1.51
RPA3-203ENST00000401447 GAB4Q2WGN9 574 aa5.62□□□□□ -1.51
RPA3-203ENST00000401447 NBPF9Q3BBW0 867 aa5.62□□□□□ -1.51
RPA3-203ENST00000401447 TDRD10Q5VZ19 366 aaKnown RBP5.62□□□□□ -1.51
RPA3-203ENST00000401447 UNC5AQ6ZN44 842 aa5.62□□□□□ -1.51
RPA3-203ENST00000401447 CBLL1Q75N03 491 aa5.62□□□□□ -1.51
RPA3-203ENST00000401447 TTC6Q86TZ1 520 aa5.62□□□□□ -1.51
RPA3-203ENST00000401447 ENOX1Q8TC92 643 aaKnown RBP5.62□□□□□ -1.51
RPA3-203ENST00000401447 SYTL5Q8TDW5 730 aaPredicted RBP5.62□□□□□ -1.51
RPA3-203ENST00000401447 SHDQ96IW2 340 aa5.62□□□□□ -1.51
RPA3-203ENST00000401447 ALPK1Q96QP1 1244 aa5.62□□□□□ -1.51
RPA3-203ENST00000401447 TINF2Q9BSI4 451 aa5.62□□□□□ -1.51
RPA3-203ENST00000401447 PHAXQ9H814 394 aaKnown RBP5.62□□□□□ -1.51
RPA3-203ENST00000401447 IGSF5Q9NSI5 407 aa5.62□□□□□ -1.51
RPA3-203ENST00000401447 SLAMF8Q9P0V8 285 aa5.62□□□□□ -1.51
RPA3-203ENST00000401447 FBXL21Q9UKT6 434 aa5.62□□□□□ -1.51
RPA3-203ENST00000401447 TARBP1Q13395 1621 aaKnown RBP5.62□□□□□ -1.51
RPA3-203ENST00000401447 SIGLEC6O43699 453 aa5.61□□□□□ -1.51
RPA3-203ENST00000401447 DNAJA1P31689 397 aaKnown RBP5.61□□□□□ -1.51
RPA3-203ENST00000401447 AUHQ13825 339 aaKnown RBP5.61□□□□□ -1.51
RPA3-203ENST00000401447 ZYXQ15942 572 aaKnown RBP5.61□□□□□ -1.51
RPA3-203ENST00000401447 SNAPC4Q5SXM2 1469 aa5.61□□□□□ -1.51
RPA3-203ENST00000401447 TMC3Q7Z5M5 1100 aa5.61□□□□□ -1.51
RPA3-203ENST00000401447 LRRN4CLQ8ND94 238 aa5.61□□□□□ -1.51
RPA3-203ENST00000401447 MAGI1Q96QZ7 1491 aaPredicted RBP5.61□□□□□ -1.51
RPA3-203ENST00000401447 HDAC8Q9BY41 377 aa5.61□□□□□ -1.51
RPA3-203ENST00000401447 PCDHA11Q9Y5I1 949 aa5.61□□□□□ -1.51
RPA3-203ENST00000401447 SSU72P8A0A1W2PR75 194 aa5.6□□□□□ -1.51
RPA3-203ENST00000401447 WASH4PA8MWX3 477 aa5.6□□□□□ -1.51
RPA3-203ENST00000401447 RBAK-RBAKDNI3L0D1 243 aa5.6□□□□□ -1.51
RPA3-203ENST00000401447 PRAMEF1O95521 474 aa5.6□□□□□ -1.51
RPA3-203ENST00000401447 ESR1P03372 595 aa5.6□□□□□ -1.51
RPA3-203ENST00000401447 ZC3H6P61129 1189 aaKnown RBP5.6□□□□□ -1.51
RPA3-203ENST00000401447 SNW1Q13573 536 aaKnown RBP5.6□□□□□ -1.51
RPA3-203ENST00000401447 TNNI3KQ59H18 835 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms