RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 FHOD1Q9Y613 1164 aa14.28□□□□□ -0.12
PPP4R1-202ENST00000400555 SRGAP2O75044 1071 aa14.27□□□□□ -0.12
PPP4R1-202ENST00000400555 PLA2G4AP47712 749 aa14.27□□□□□ -0.12
PPP4R1-202ENST00000400555 COPB1P53618 953 aaKnown RBP14.27□□□□□ -0.12
PPP4R1-202ENST00000400555 ST5P78524 1137 aa14.27□□□□□ -0.12
PPP4R1-202ENST00000400555 TROAPQ12815 778 aa14.27□□□□□ -0.12
PPP4R1-202ENST00000400555 SEC23AQ15436 765 aa14.27□□□□□ -0.12
PPP4R1-202ENST00000400555 DYMQ7RTS9 669 aa14.27□□□□□ -0.12
PPP4R1-202ENST00000400555 RGS22Q8NE09 1264 aa14.27□□□□□ -0.12
PPP4R1-202ENST00000400555 RABEP2Q9H5N1 569 aa14.27□□□□□ -0.12
PPP4R1-202ENST00000400555 JADE2Q9NQC1 790 aa14.27□□□□□ -0.12
PPP4R1-202ENST00000400555 RBM28Q9NW13 759 aaKnown RBP14.27□□□□□ -0.12
PPP4R1-202ENST00000400555 HDAC6Q9UBN7 1215 aa14.27□□□□□ -0.12
PPP4R1-202ENST00000400555 CCNT1O60563 726 aaKnown RBP14.27□□□□□ -0.13
PPP4R1-202ENST00000400555 NTSR2O95665 410 aa14.27□□□□□ -0.13
PPP4R1-202ENST00000400555 RPN1P04843 607 aaKnown RBP14.27□□□□□ -0.13
PPP4R1-202ENST00000400555 ERCC5P28715 1186 aaPredicted RBP14.27□□□□□ -0.13
PPP4R1-202ENST00000400555 PRCPP42785 496 aa14.27□□□□□ -0.13
PPP4R1-202ENST00000400555 GPS2Q13227 327 aa14.27□□□□□ -0.13
PPP4R1-202ENST00000400555 SOGA3Q5TF21 947 aa14.27□□□□□ -0.13
PPP4R1-202ENST00000400555 TBC1D9BQ66K14 1250 aa14.27□□□□□ -0.13
PPP4R1-202ENST00000400555 CNGA4Q8IV77 575 aa14.27□□□□□ -0.13
PPP4R1-202ENST00000400555 BLIDQ8IZY5 108 aa14.27□□□□□ -0.13
PPP4R1-202ENST00000400555 CDK5RAP3Q96JB5 506 aa14.27□□□□□ -0.13
PPP4R1-202ENST00000400555 LUC7L2Q9Y383 392 aaKnown RBP14.27□□□□□ -0.13
PPP4R1-202ENST00000400555 CTAGE15A4D2H0 777 aa14.27□□□□□ -0.13
PPP4R1-202ENST00000400555 CTAGE8P0CG41 777 aa14.27□□□□□ -0.13
PPP4R1-202ENST00000400555 TXKP42681 527 aa14.27□□□□□ -0.13
PPP4R1-202ENST00000400555 CCDC122Q5T0U0 273 aa14.27□□□□□ -0.13
PPP4R1-202ENST00000400555 CTAGE6Q86UF2 777 aa14.27□□□□□ -0.13
PPP4R1-202ENST00000400555 TICAM2Q86XR7 235 aa14.27□□□□□ -0.13
PPP4R1-202ENST00000400555 CTAGE4Q8IX94 777 aa14.27□□□□□ -0.13
PPP4R1-202ENST00000400555 MARCH10Q8NA82 808 aaPredicted RBP14.27□□□□□ -0.13
PPP4R1-202ENST00000400555 PHF20Q9BVI0 1012 aa14.27□□□□□ -0.13
PPP4R1-202ENST00000400555 DEF6Q9H4E7 631 aa14.27□□□□□ -0.13
PPP4R1-202ENST00000400555 ZNHIT6Q9NWK9 470 aaKnown RBP14.27□□□□□ -0.13
PPP4R1-202ENST00000400555 CALM1P0DP23 149 aa14.26□□□□□ -0.13
PPP4R1-202ENST00000400555 CALM2P0DP24 149 aa14.26□□□□□ -0.13
PPP4R1-202ENST00000400555 CALM3P0DP25 149 aa14.26□□□□□ -0.13
PPP4R1-202ENST00000400555 H2AFXP16104 143 aaPredicted RBP14.26□□□□□ -0.13
PPP4R1-202ENST00000400555 CYP27A1Q02318 531 aa14.26□□□□□ -0.13
PPP4R1-202ENST00000400555 RAD51AP2Q09MP3 1159 aa14.26□□□□□ -0.13
PPP4R1-202ENST00000400555 PTF1AQ7RTS3 328 aa14.26□□□□□ -0.13
PPP4R1-202ENST00000400555 ZNF18P17022 549 aa14.26□□□□□ -0.13
PPP4R1-202ENST00000400555 CCDC93Q567U6 631 aa14.26□□□□□ -0.13
PPP4R1-202ENST00000400555 TRIML1Q8N9V2 468 aa14.26□□□□□ -0.13
PPP4R1-202ENST00000400555 CCDC47Q96A33 483 aaKnown RBP14.26□□□□□ -0.13
PPP4R1-202ENST00000400555 GSDMAQ96QA5 445 aa14.26□□□□□ -0.13
PPP4R1-202ENST00000400555 RIOK1Q9BRS2 568 aaKnown RBP14.26□□□□□ -0.13
PPP4R1-202ENST00000400555 PDE11AQ9HCR9 933 aa14.26□□□□□ -0.13
PPP4R1-202ENST00000400555 B4DLN1 442 aa14.26□□□□□ -0.13
PPP4R1-202ENST00000400555 RNF225M0QZC1 329 aaPredicted RBP14.26□□□□□ -0.13
PPP4R1-202ENST00000400555 MFAP3LO75121 409 aa14.26□□□□□ -0.13
PPP4R1-202ENST00000400555 LDHBP07195 334 aaKnown RBP14.26□□□□□ -0.13
PPP4R1-202ENST00000400555 TECP42680 631 aa14.26□□□□□ -0.13
PPP4R1-202ENST00000400555 LONRF2Q1L5Z9 754 aa14.26□□□□□ -0.13
PPP4R1-202ENST00000400555 TMEM139Q8IV31 216 aa14.26□□□□□ -0.13
PPP4R1-202ENST00000400555 CSGALNACT2Q8N6G5 542 aa14.26□□□□□ -0.13
PPP4R1-202ENST00000400555 TCP11L1Q9NUJ3 509 aa14.26□□□□□ -0.13
PPP4R1-202ENST00000400555 BIN2Q9UBW5 565 aaPredicted RBP14.26□□□□□ -0.13
PPP4R1-202ENST00000400555 PNPLA7Q6ZV29 1317 aa14.25□□□□□ -0.13
PPP4R1-202ENST00000400555 GYPCP04921 128 aa14.25□□□□□ -0.13
PPP4R1-202ENST00000400555 PDE4DQ08499 809 aa14.25□□□□□ -0.13
PPP4R1-202ENST00000400555 TBC1D8BQ0IIM8 1120 aa14.25□□□□□ -0.13
PPP4R1-202ENST00000400555 CC2D1AQ6P1N0 951 aaPredicted RBP14.25□□□□□ -0.13
PPP4R1-202ENST00000400555 USP17L2Q6R6M4 530 aa14.25□□□□□ -0.13
PPP4R1-202ENST00000400555 ANKRD13CQ8N6S4 541 aa14.25□□□□□ -0.13
PPP4R1-202ENST00000400555 ADD3Q9UEY8 706 aaKnown RBP14.25□□□□□ -0.13
PPP4R1-202ENST00000400555 N4BP2Q86UW6 1770 aaPredicted RBP14.25□□□□□ -0.13
PPP4R1-202ENST00000400555 A0A1B0GTH6 734 aa14.25□□□□□ -0.13
PPP4R1-202ENST00000400555 PPP1R3GB7ZBB8 358 aa14.25□□□□□ -0.13
PPP4R1-202ENST00000400555 ARID5AQ03989 594 aa14.25□□□□□ -0.13
PPP4R1-202ENST00000400555 GPR161Q8N6U8 529 aaKnown RBP14.25□□□□□ -0.13
PPP4R1-202ENST00000400555 C8orf37Q96NL8 207 aa14.25□□□□□ -0.13
PPP4R1-202ENST00000400555 MMRN2Q9H8L6 949 aa14.25□□□□□ -0.13
PPP4R1-202ENST00000400555 XDHP47989 1333 aa14.25□□□□□ -0.13
PPP4R1-202ENST00000400555 SASH3O75995 380 aa14.25□□□□□ -0.13
PPP4R1-202ENST00000400555 UBE4AQ14139 1066 aa14.25□□□□□ -0.13
PPP4R1-202ENST00000400555 NGLY1Q96IV0 654 aa14.25□□□□□ -0.13
PPP4R1-202ENST00000400555 TMEM60Q9H2L4 133 aa14.25□□□□□ -0.13
PPP4R1-202ENST00000400555 MRFAP1Q9Y605 127 aa14.25□□□□□ -0.13
PPP4R1-202ENST00000400555 LAMA4Q16363 1823 aa14.25□□□□□ -0.13
PPP4R1-202ENST00000400555 PSMA7O14818 248 aa14.24□□□□□ -0.13
PPP4R1-202ENST00000400555 BMP15O95972 392 aa14.24□□□□□ -0.13
PPP4R1-202ENST00000400555 PARP1P09874 1014 aaKnown RBP14.24□□□□□ -0.13
PPP4R1-202ENST00000400555 MAP3K9P80192 1104 aa14.24□□□□□ -0.13
PPP4R1-202ENST00000400555 ZNF579Q8NAF0 562 aaKnown RBP14.24□□□□□ -0.13
PPP4R1-202ENST00000400555 NAPGQ99747 312 aaPredicted RBP14.24□□□□□ -0.13
PPP4R1-202ENST00000400555 TBC1D7Q9P0N9 293 aa14.24□□□□□ -0.13
PPP4R1-202ENST00000400555 FRMPD2Q68DX3 1309 aaPredicted RBP14.24□□□□□ -0.13
PPP4R1-202ENST00000400555 C6orf229H3BNL8 230 aa14.24□□□□□ -0.13
PPP4R1-202ENST00000400555 SARSP49591 514 aaKnown RBP14.24□□□□□ -0.13
PPP4R1-202ENST00000400555 SH3RF3Q8TEJ3 882 aaPredicted RBP14.24□□□□□ -0.13
PPP4R1-202ENST00000400555 NSUN4Q96CB9 384 aaKnown RBP14.24□□□□□ -0.13
PPP4R1-202ENST00000400555 SLC39A2Q9NP94 309 aa14.24□□□□□ -0.13
PPP4R1-202ENST00000400555 FAM207AQ9NSI2 230 aaPredicted RBP14.24□□□□□ -0.13
PPP4R1-202ENST00000400555 EXOC1Q9NV70 894 aa14.24□□□□□ -0.13
PPP4R1-202ENST00000400555 MPHOSPH10O00566 681 aaKnown RBP14.24□□□□□ -0.13
PPP4R1-202ENST00000400555 TUBB4AP04350 444 aa14.24□□□□□ -0.13
PPP4R1-202ENST00000400555 KLK7P49862 253 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 181.3 ms