RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 GPS2Q13227 327 aa15.8■□□□□ 0.12
SCAF4-202ENST00000399804 CCDC93Q567U6 631 aa15.8■□□□□ 0.12
SCAF4-202ENST00000399804 DYMQ7RTS9 669 aa15.8■□□□□ 0.12
SCAF4-202ENST00000399804 MTERF4Q7Z6M4 381 aaKnown RBP15.8■□□□□ 0.12
SCAF4-202ENST00000399804 ATP6V0A2Q9Y487 856 aa15.8■□□□□ 0.12
SCAF4-202ENST00000399804 STK36Q9NRP7 1315 aa15.8■□□□□ 0.12
SCAF4-202ENST00000399804 FAM196BA6NMK8 535 aa15.8■□□□□ 0.12
SCAF4-202ENST00000399804 ASPRV1Q53RT3 343 aa15.8■□□□□ 0.12
SCAF4-202ENST00000399804 GPATCH4Q5T3I0 446 aaKnown RBP15.8■□□□□ 0.12
SCAF4-202ENST00000399804 CCDC174Q6PII3 467 aa15.8■□□□□ 0.12
SCAF4-202ENST00000399804 SYCP3Q8IZU3 236 aa15.8■□□□□ 0.12
SCAF4-202ENST00000399804 TDRD7Q8NHU6 1098 aaKnown RBP15.8■□□□□ 0.12
SCAF4-202ENST00000399804 COA7Q96BR5 231 aa15.8■□□□□ 0.12
SCAF4-202ENST00000399804 MAP7D2Q96T17 732 aa15.8■□□□□ 0.12
SCAF4-202ENST00000399804 NAP1L4Q99733 375 aaKnown RBP15.8■□□□□ 0.12
SCAF4-202ENST00000399804 TMEM232C9JQI7 657 aa15.79■□□□□ 0.12
SCAF4-202ENST00000399804 TRAPPC10P48553 1259 aa15.79■□□□□ 0.12
SCAF4-202ENST00000399804 KANSL2Q9H9L4 492 aa15.79■□□□□ 0.12
SCAF4-202ENST00000399804 BICDL2A1A5D9 508 aa15.79■□□□□ 0.12
SCAF4-202ENST00000399804 PRKG1Q13976 671 aa15.79■□□□□ 0.12
SCAF4-202ENST00000399804 GRAMD1CQ8IYS0 662 aa15.79■□□□□ 0.12
SCAF4-202ENST00000399804 DHX36Q9H2U1 1008 aaKnown RBP15.79■□□□□ 0.12
SCAF4-202ENST00000399804 SYNRGQ9UMZ2 1314 aa15.79■□□□□ 0.12
SCAF4-202ENST00000399804 OR52Z1P0C646 297 aa15.79■□□□□ 0.12
SCAF4-202ENST00000399804 AOC3Q16853 763 aa15.79■□□□□ 0.12
SCAF4-202ENST00000399804 LONRF3Q496Y0 759 aa15.79■□□□□ 0.12
SCAF4-202ENST00000399804 CEP95Q96GE4 821 aa15.79■□□□□ 0.12
SCAF4-202ENST00000399804 HPS5Q9UPZ3 1129 aa15.79■□□□□ 0.12
SCAF4-202ENST00000399804 CHMP2AO43633 222 aa15.79■□□□□ 0.12
SCAF4-202ENST00000399804 CASQ1P31415 396 aa15.79■□□□□ 0.12
SCAF4-202ENST00000399804 RCAN1P53805 252 aa15.79■□□□□ 0.12
SCAF4-202ENST00000399804 KARSQ15046 597 aaKnown RBP15.79■□□□□ 0.12
SCAF4-202ENST00000399804 TDRD3Q9H7E2 651 aaKnown RBP15.79■□□□□ 0.12
SCAF4-202ENST00000399804 MMRN2Q9H8L6 949 aa15.79■□□□□ 0.12
SCAF4-202ENST00000399804 PAK1Q13153 545 aa15.78■□□□□ 0.12
SCAF4-202ENST00000399804 GOLPH3LQ9H4A5 285 aa15.78■□□□□ 0.12
SCAF4-202ENST00000399804 FANCLQ9NW38 375 aa15.78■□□□□ 0.12
SCAF4-202ENST00000399804 EPSTI1Q96J88 318 aa15.78■□□□□ 0.12
SCAF4-202ENST00000399804 DNAI1Q9UI46 699 aa15.78■□□□□ 0.12
SCAF4-202ENST00000399804 ECE2O60344 883 aa15.78■□□□□ 0.12
SCAF4-202ENST00000399804 MATR3P43243 847 aaKnown RBP eCLIP15.78■□□□□ 0.12
SCAF4-202ENST00000399804 RAD51AP2Q09MP3 1159 aa15.78■□□□□ 0.12
SCAF4-202ENST00000399804 TIGD1Q96MW7 591 aa15.78■□□□□ 0.12
SCAF4-202ENST00000399804 ZBTB21Q9ULJ3 1066 aa15.78■□□□□ 0.12
SCAF4-202ENST00000399804 SRPRBQ9Y5M8 271 aaKnown RBP15.78■□□□□ 0.12
SCAF4-202ENST00000399804 LRMPQ12912 555 aa15.77■□□□□ 0.12
SCAF4-202ENST00000399804 TXLNBQ8N3L3 684 aa15.77■□□□□ 0.12
SCAF4-202ENST00000399804 PRIMPOLQ96LW4 560 aa15.77■□□□□ 0.12
SCAF4-202ENST00000399804 PICK1Q9NRD5 415 aa15.77■□□□□ 0.12
SCAF4-202ENST00000399804 NCAPH2Q6IBW4 605 aa15.77■□□□□ 0.12
SCAF4-202ENST00000399804 STXBP4Q6ZWJ1 553 aa15.77■□□□□ 0.12
SCAF4-202ENST00000399804 ADGRA1Q86SQ6 560 aa15.77■□□□□ 0.12
SCAF4-202ENST00000399804 CSGALNACT2Q8N6G5 542 aa15.77■□□□□ 0.12
SCAF4-202ENST00000399804 CHURC1Q8WUH1 139 aa15.77■□□□□ 0.12
SCAF4-202ENST00000399804 GOPCQ9HD26 462 aa15.77■□□□□ 0.12
SCAF4-202ENST00000399804 MRC1P22897 1456 aa15.77■□□□□ 0.11
SCAF4-202ENST00000399804 COL9A3Q14050 684 aaPredicted RBP15.77■□□□□ 0.11
SCAF4-202ENST00000399804 FBXO11Q86XK2 927 aa15.77■□□□□ 0.11
SCAF4-202ENST00000399804 MXD3Q9BW11 206 aa15.77■□□□□ 0.11
SCAF4-202ENST00000399804 HOMER2Q9NSB8 354 aa15.77■□□□□ 0.11
SCAF4-202ENST00000399804 DAGLAQ9Y4D2 1042 aa15.77■□□□□ 0.11
SCAF4-202ENST00000399804 GOLGA6L9A6NEM1 432 aa15.76■□□□□ 0.11
SCAF4-202ENST00000399804 ST3GAL1Q11201 340 aa15.76■□□□□ 0.11
SCAF4-202ENST00000399804 IGSF22Q8N9C0 903 aa15.76■□□□□ 0.11
SCAF4-202ENST00000399804 TBCKQ8TEA7 893 aa15.76■□□□□ 0.11
SCAF4-202ENST00000399804 RIOK1Q9BRS2 568 aaKnown RBP15.76■□□□□ 0.11
SCAF4-202ENST00000399804 PCDHA12Q9UN75 941 aa15.76■□□□□ 0.11
SCAF4-202ENST00000399804 TCRBV5S4A2TA0A5A2 114 aa15.76■□□□□ 0.11
SCAF4-202ENST00000399804 USP17L5A8MUK1 530 aa15.76■□□□□ 0.11
SCAF4-202ENST00000399804 AKR1B10O60218 316 aa15.76■□□□□ 0.11
SCAF4-202ENST00000399804 PTPREP23469 700 aa15.76■□□□□ 0.11
SCAF4-202ENST00000399804 NT5C2P49902 561 aa15.76■□□□□ 0.11
SCAF4-202ENST00000399804 PFKFB3Q16875 520 aaPredicted RBP15.76■□□□□ 0.11
SCAF4-202ENST00000399804 CCDC181Q5TID7 509 aa15.76■□□□□ 0.11
SCAF4-202ENST00000399804 CCDC65Q8IXS2 484 aa15.76■□□□□ 0.11
SCAF4-202ENST00000399804 STAG2Q8N3U4 1231 aa15.76■□□□□ 0.11
SCAF4-202ENST00000399804 LONP1P36776 959 aaKnown RBP15.76■□□□□ 0.11
SCAF4-202ENST00000399804 TNFAIP1Q13829 316 aa15.76■□□□□ 0.11
SCAF4-202ENST00000399804 SBK1Q52WX2 424 aa15.76■□□□□ 0.11
SCAF4-202ENST00000399804 COL23A1Q86Y22 540 aaPredicted RBP15.76■□□□□ 0.11
SCAF4-202ENST00000399804 CACNA1FO60840 1977 aa15.76■□□□□ 0.11
SCAF4-202ENST00000399804 H7C1D1 291 aa15.75■□□□□ 0.11
SCAF4-202ENST00000399804 TRAF5O00463 557 aa15.75■□□□□ 0.11
SCAF4-202ENST00000399804 ZBTB7AO95365 584 aa15.75■□□□□ 0.11
SCAF4-202ENST00000399804 ZFYVE27Q5T4F4 411 aa15.75■□□□□ 0.11
SCAF4-202ENST00000399804 CNNM4Q6P4Q7 775 aa15.75■□□□□ 0.11
SCAF4-202ENST00000399804 RTKN2Q8IZC4 609 aa15.75■□□□□ 0.11
SCAF4-202ENST00000399804 FMR1NBQ8N0W7 255 aaPredicted RBP15.75■□□□□ 0.11
SCAF4-202ENST00000399804 SRBD1Q8N5C6 995 aaKnown RBP15.75■□□□□ 0.11
SCAF4-202ENST00000399804 TSC1Q92574 1164 aa15.75■□□□□ 0.11
SCAF4-202ENST00000399804 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.75■□□□□ 0.11
SCAF4-202ENST00000399804 GTPBP4Q9BZE4 634 aaKnown RBP15.75■□□□□ 0.11
SCAF4-202ENST00000399804 PAXBP1Q9Y5B6 917 aa15.75■□□□□ 0.11
SCAF4-202ENST00000399804 SP4Q02446 784 aa15.75■□□□□ 0.11
SCAF4-202ENST00000399804 HAUS3Q68CZ6 603 aa15.75■□□□□ 0.11
SCAF4-202ENST00000399804 FOXP4Q8IVH2 680 aaPredicted RBP15.75■□□□□ 0.11
SCAF4-202ENST00000399804 NELFBQ8WX92 580 aa15.75■□□□□ 0.11
SCAF4-202ENST00000399804 BCL2L12Q9HB09 334 aa15.75■□□□□ 0.11
SCAF4-202ENST00000399804 FAM13AO94988 1023 aa15.75■□□□□ 0.11
SCAF4-202ENST00000399804 ERCC3P19447 782 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms