RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 PSMB7Q99436 277 aa13.33□□□□□ -0.28
ITSN1-211ENST00000399355 GNL3LQ9NVN8 582 aaKnown RBP13.33□□□□□ -0.28
ITSN1-211ENST00000399355 HDAC6Q9UBN7 1215 aa13.33□□□□□ -0.28
ITSN1-211ENST00000399355 PPP1R3GB7ZBB8 358 aa13.33□□□□□ -0.28
ITSN1-211ENST00000399355 ZMYND10O75800 440 aa13.33□□□□□ -0.28
ITSN1-211ENST00000399355 SLU7O95391 586 aaKnown RBP13.33□□□□□ -0.28
ITSN1-211ENST00000399355 SCG2P13521 617 aa13.33□□□□□ -0.28
ITSN1-211ENST00000399355 ZNF18P17022 549 aa13.33□□□□□ -0.28
ITSN1-211ENST00000399355 RFC4P35249 363 aa13.33□□□□□ -0.28
ITSN1-211ENST00000399355 GPSM2P81274 684 aa13.33□□□□□ -0.28
ITSN1-211ENST00000399355 PTPROQ16827 1216 aa13.33□□□□□ -0.28
ITSN1-211ENST00000399355 ZNF652Q9Y2D9 606 aa13.33□□□□□ -0.28
ITSN1-211ENST00000399355 SRGAP2O75044 1071 aa13.33□□□□□ -0.28
ITSN1-211ENST00000399355 UFL1O94874 794 aa13.33□□□□□ -0.28
ITSN1-211ENST00000399355 PRCPP42785 496 aa13.33□□□□□ -0.28
ITSN1-211ENST00000399355 SARSP49591 514 aaKnown RBP13.33□□□□□ -0.28
ITSN1-211ENST00000399355 SKIDA1Q1XH10 827 aa13.33□□□□□ -0.28
ITSN1-211ENST00000399355 TNFRSF25Q93038 417 aa13.33□□□□□ -0.28
ITSN1-211ENST00000399355 PARP3Q9Y6F1 533 aa13.33□□□□□ -0.28
ITSN1-211ENST00000399355 DUSP10Q9Y6W6 482 aa13.33□□□□□ -0.28
ITSN1-211ENST00000399355 C6orf229H3BNL8 230 aa13.32□□□□□ -0.28
ITSN1-211ENST00000399355 TSPY3P0CV98 308 aa13.32□□□□□ -0.28
ITSN1-211ENST00000399355 TSPY8P0CW00 308 aa13.32□□□□□ -0.28
ITSN1-211ENST00000399355 ETF1P62495 437 aaKnown RBP13.32□□□□□ -0.28
ITSN1-211ENST00000399355 TCP10Q12799 353 aa13.32□□□□□ -0.28
ITSN1-211ENST00000399355 SLF1Q9BQI6 1058 aa13.32□□□□□ -0.28
ITSN1-211ENST00000399355 RNF41Q9H4P4 317 aaPredicted RBP13.32□□□□□ -0.28
ITSN1-211ENST00000399355 UBAP1LF5GYI3 381 aa13.32□□□□□ -0.28
ITSN1-211ENST00000399355 GYPCP04921 128 aa13.32□□□□□ -0.28
ITSN1-211ENST00000399355 SPECC1LQ69YQ0 1117 aa13.32□□□□□ -0.28
ITSN1-211ENST00000399355 RNF26Q9BY78 433 aaPredicted RBP13.32□□□□□ -0.28
ITSN1-211ENST00000399355 SMCHD1A6NHR9 2005 aa13.32□□□□□ -0.28
ITSN1-211ENST00000399355 PHLPP1O60346 1717 aa13.32□□□□□ -0.28
ITSN1-211ENST00000399355 TECP42680 631 aa13.32□□□□□ -0.28
ITSN1-211ENST00000399355 DNA2P51530 1060 aa13.32□□□□□ -0.28
ITSN1-211ENST00000399355 UBE4AQ14139 1066 aa13.32□□□□□ -0.28
ITSN1-211ENST00000399355 ENOX2Q16206 610 aaKnown RBP13.32□□□□□ -0.28
ITSN1-211ENST00000399355 DYMQ7RTS9 669 aa13.32□□□□□ -0.28
ITSN1-211ENST00000399355 CCDC12Q8WUD4 166 aaPredicted RBP13.32□□□□□ -0.28
ITSN1-211ENST00000399355 KAT14Q9H8E8 782 aa13.32□□□□□ -0.28
ITSN1-211ENST00000399355 GPCPD1Q9NPB8 672 aa13.32□□□□□ -0.28
ITSN1-211ENST00000399355 TBC1D7Q9P0N9 293 aa13.32□□□□□ -0.28
ITSN1-211ENST00000399355 TPM4P67936 248 aa13.31□□□□□ -0.28
ITSN1-211ENST00000399355 TRMT1LQ7Z2T5 733 aaKnown RBP13.31□□□□□ -0.28
ITSN1-211ENST00000399355 NUDT12Q9BQG2 462 aa13.31□□□□□ -0.28
ITSN1-211ENST00000399355 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.31□□□□□ -0.28
ITSN1-211ENST00000399355 RTCBQ9Y3I0 505 aaKnown RBP13.31□□□□□ -0.28
ITSN1-211ENST00000399355 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.31□□□□□ -0.28
ITSN1-211ENST00000399355 IKBKBO14920 756 aa13.31□□□□□ -0.28
ITSN1-211ENST00000399355 LDHBP07195 334 aaKnown RBP13.31□□□□□ -0.28
ITSN1-211ENST00000399355 NAALADL2Q58DX5 795 aa13.31□□□□□ -0.28
ITSN1-211ENST00000399355 TTBK2Q6IQ55 1244 aa13.31□□□□□ -0.28
ITSN1-211ENST00000399355 TMEM47Q9BQJ4 181 aa13.31□□□□□ -0.28
ITSN1-211ENST00000399355 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.31□□□□□ -0.28
ITSN1-211ENST00000399355 PAXBP1Q9Y5B6 917 aa13.31□□□□□ -0.28
ITSN1-211ENST00000399355 MKI67P46013 3256 aaKnown RBP13.31□□□□□ -0.28
ITSN1-211ENST00000399355 USP17L5A8MUK1 530 aa13.31□□□□□ -0.28
ITSN1-211ENST00000399355 SASH3O75995 380 aa13.31□□□□□ -0.28
ITSN1-211ENST00000399355 GNAT2P19087 354 aa13.31□□□□□ -0.28
ITSN1-211ENST00000399355 GSDMDP57764 484 aa13.31□□□□□ -0.28
ITSN1-211ENST00000399355 KRT31Q15323 416 aa13.31□□□□□ -0.28
ITSN1-211ENST00000399355 LRRC41Q15345 812 aa13.31□□□□□ -0.28
ITSN1-211ENST00000399355 SF3B3Q15393 1217 aaKnown RBP13.31□□□□□ -0.28
ITSN1-211ENST00000399355 UBE2SQ16763 222 aa13.31□□□□□ -0.28
ITSN1-211ENST00000399355 ZFPM1Q8IX07 1006 aa13.31□□□□□ -0.28
ITSN1-211ENST00000399355 CRNKL1Q9BZJ0 848 aaKnown RBP13.31□□□□□ -0.28
ITSN1-211ENST00000399355 WDR19Q8NEZ3 1342 aa13.31□□□□□ -0.28
ITSN1-211ENST00000399355 N4BP3O15049 544 aa13.3□□□□□ -0.28
ITSN1-211ENST00000399355 CAVIN2O95810 425 aa13.3□□□□□ -0.28
ITSN1-211ENST00000399355 RHOXF2BP0C7M4 288 aa13.3□□□□□ -0.28
ITSN1-211ENST00000399355 BTDP43251 543 aa13.3□□□□□ -0.28
ITSN1-211ENST00000399355 ERVK-24P63145 666 aa13.3□□□□□ -0.28
ITSN1-211ENST00000399355 GTF2IP78347 998 aa13.3□□□□□ -0.28
ITSN1-211ENST00000399355 CEP95Q96GE4 821 aa13.3□□□□□ -0.28
ITSN1-211ENST00000399355 DRC1Q96MC2 740 aa13.3□□□□□ -0.28
ITSN1-211ENST00000399355 PIGSQ96S52 555 aa13.3□□□□□ -0.28
ITSN1-211ENST00000399355 RHOXF2Q9BQY4 288 aa13.3□□□□□ -0.28
ITSN1-211ENST00000399355 POTEMA6NI47 508 aa13.3□□□□□ -0.28
ITSN1-211ENST00000399355 CYP27A1Q02318 531 aa13.3□□□□□ -0.28
ITSN1-211ENST00000399355 CCDC178Q5BJE1 867 aa13.3□□□□□ -0.28
ITSN1-211ENST00000399355 SMCR8Q8TEV9 937 aaPredicted RBP13.3□□□□□ -0.28
ITSN1-211ENST00000399355 POLLQ9UGP5 575 aa13.3□□□□□ -0.28
ITSN1-211ENST00000399355 MAD2L2Q9UI95 211 aa13.3□□□□□ -0.28
ITSN1-211ENST00000399355 CCDC196A0A1B0GTZ2 297 aa13.3□□□□□ -0.28
ITSN1-211ENST00000399355 PLEKP08567 350 aaPredicted RBP13.3□□□□□ -0.28
ITSN1-211ENST00000399355 TPTE2Q6XPS3 522 aa13.3□□□□□ -0.28
ITSN1-211ENST00000399355 SMARCAL1Q9NZC9 954 aa13.3□□□□□ -0.28
ITSN1-211ENST00000399355 DUOX1Q9NRD9 1551 aa13.3□□□□□ -0.28
ITSN1-211ENST00000399355 DOCK2Q92608 1830 aa13.3□□□□□ -0.28
ITSN1-211ENST00000399355 BCORQ6W2J9 1755 aa13.3□□□□□ -0.28
ITSN1-211ENST00000399355 CCNT1O60563 726 aaKnown RBP13.29□□□□□ -0.28
ITSN1-211ENST00000399355 SLFN14P0C7P3 912 aa13.29□□□□□ -0.28
ITSN1-211ENST00000399355 NR1I3Q14994 352 aa13.29□□□□□ -0.28
ITSN1-211ENST00000399355 MFSD14BQ5SR56 506 aa13.29□□□□□ -0.28
ITSN1-211ENST00000399355 NCAPH2Q6IBW4 605 aa13.29□□□□□ -0.28
ITSN1-211ENST00000399355 CCDC150Q8NCX0 1101 aa13.29□□□□□ -0.28
ITSN1-211ENST00000399355 BPIFA3Q9BQP9 254 aa13.29□□□□□ -0.28
ITSN1-211ENST00000399355 AGPAT5Q9NUQ2 364 aa13.29□□□□□ -0.28
ITSN1-211ENST00000399355 PRPF3O43395 683 aaKnown RBP13.29□□□□□ -0.28
ITSN1-211ENST00000399355 TXKP42681 527 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms