RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 COL9A3Q14050 684 aaPredicted RBP22.53■■□□□ 1.2
HOXA9-202ENST00000396345 COG2Q14746 738 aa22.53■■□□□ 1.2
HOXA9-202ENST00000396345 TMEM67Q5HYA8 995 aa22.53■■□□□ 1.2
HOXA9-202ENST00000396345 CHMP4CQ96CF2 233 aa22.53■■□□□ 1.2
HOXA9-202ENST00000396345 GMCL1Q96IK5 515 aa22.53■■□□□ 1.2
HOXA9-202ENST00000396345 WTAPQ15007 396 aa22.52■■□□□ 1.2
HOXA9-202ENST00000396345 PNMA1Q8ND90 353 aa22.52■■□□□ 1.2
HOXA9-202ENST00000396345 IGDCC4Q8TDY8 1250 aa22.52■■□□□ 1.2
HOXA9-202ENST00000396345 GTF3C2Q8WUA4 911 aaPredicted RBP22.52■■□□□ 1.2
HOXA9-202ENST00000396345 DCAF4Q8WV16 495 aa22.52■■□□□ 1.2
HOXA9-202ENST00000396345 JAKMIP1Q96N16 626 aaKnown RBP22.52■■□□□ 1.2
HOXA9-202ENST00000396345 MTA3Q9BTC8 594 aa22.52■■□□□ 1.2
HOXA9-202ENST00000396345 HOXC10Q9NYD6 342 aa22.52■■□□□ 1.2
HOXA9-202ENST00000396345 ISY1Q9ULR0 285 aaKnown RBP22.52■■□□□ 1.2
HOXA9-202ENST00000396345 FKTNO75072 461 aa22.51■■□□□ 1.19
HOXA9-202ENST00000396345 HMGB1P09429 215 aaKnown RBP22.51■■□□□ 1.19
HOXA9-202ENST00000396345 DHX32Q7L7V1 743 aaKnown RBP22.51■■□□□ 1.19
HOXA9-202ENST00000396345 ZNF296Q8WUU4 475 aaPredicted RBP22.51■■□□□ 1.19
HOXA9-202ENST00000396345 TMEM87BQ96K49 555 aa22.51■■□□□ 1.19
HOXA9-202ENST00000396345 FBXO28Q9NVF7 368 aa22.51■■□□□ 1.19
HOXA9-202ENST00000396345 SPDYE16A6NNV3 312 aaPredicted RBP22.5■■□□□ 1.19
HOXA9-202ENST00000396345 BCRP11274 1271 aa22.5■■□□□ 1.19
HOXA9-202ENST00000396345 PSMA5P28066 241 aa22.5■■□□□ 1.19
HOXA9-202ENST00000396345 DSG3P32926 999 aa22.5■■□□□ 1.19
HOXA9-202ENST00000396345 EXOSC10Q01780 885 aaKnown RBP22.5■■□□□ 1.19
HOXA9-202ENST00000396345 SP3Q02447 781 aa22.5■■□□□ 1.19
HOXA9-202ENST00000396345 CCDC96Q2M329 555 aa22.5■■□□□ 1.19
HOXA9-202ENST00000396345 SAMD1Q6SPF0 538 aaPredicted RBP22.5■■□□□ 1.19
HOXA9-202ENST00000396345 RASGRP2Q7LDG7 609 aa22.5■■□□□ 1.19
HOXA9-202ENST00000396345 ANKRD13CQ8N6S4 541 aa22.5■■□□□ 1.19
HOXA9-202ENST00000396345 FEM1BQ9UK73 627 aa22.5■■□□□ 1.19
HOXA9-202ENST00000396345 MYPNQ86TC9 1320 aa22.5■■□□□ 1.19
HOXA9-202ENST00000396345 RLFQ13129 1914 aa22.49■■□□□ 1.19
HOXA9-202ENST00000396345 TMEM232C9JQI7 657 aa22.49■■□□□ 1.19
HOXA9-202ENST00000396345 BLOC1S2Q6QNY1 142 aa22.49■■□□□ 1.19
HOXA9-202ENST00000396345 LBX2Q6XYB7 198 aa22.49■■□□□ 1.19
HOXA9-202ENST00000396345 KCTD1Q719H9 257 aa22.49■■□□□ 1.19
HOXA9-202ENST00000396345 SLF1Q9BQI6 1058 aa22.49■■□□□ 1.19
HOXA9-202ENST00000396345 LRRC2Q9BYS8 371 aa22.49■■□□□ 1.19
HOXA9-202ENST00000396345 LY9Q9HBG7 655 aa22.49■■□□□ 1.19
HOXA9-202ENST00000396345 SENP2Q9HC62 589 aa22.49■■□□□ 1.19
HOXA9-202ENST00000396345 GPHNQ9NQX3 736 aaPredicted RBP22.49■■□□□ 1.19
HOXA9-202ENST00000396345 WDR19Q8NEZ3 1342 aa22.49■■□□□ 1.19
HOXA9-202ENST00000396345 PARP14Q460N5 1801 aa22.48■■□□□ 1.19
HOXA9-202ENST00000396345 SH2B2O14492 632 aaPredicted RBP22.48■■□□□ 1.19
HOXA9-202ENST00000396345 PDHBP11177 359 aa22.48■■□□□ 1.19
HOXA9-202ENST00000396345 FAM110CQ1W6H9 321 aa22.48■■□□□ 1.19
HOXA9-202ENST00000396345 ATG4CQ96DT6 458 aa22.48■■□□□ 1.19
HOXA9-202ENST00000396345 PAGR1Q9BTK6 254 aa22.48■■□□□ 1.19
HOXA9-202ENST00000396345 RBPJLQ9UBG7 517 aa22.48■■□□□ 1.19
HOXA9-202ENST00000396345 PPP1R9AQ9ULJ8 1098 aa22.48■■□□□ 1.19
HOXA9-202ENST00000396345 RABGAP1Q9Y3P9 1069 aa22.48■■□□□ 1.19
HOXA9-202ENST00000396345 CASP8AP2Q9UKL3 1982 aa22.48■■□□□ 1.19
HOXA9-202ENST00000396345 SNHG28P0DPA3 235 aa22.47■■□□□ 1.19
HOXA9-202ENST00000396345 CPA1P15085 419 aa22.47■■□□□ 1.19
HOXA9-202ENST00000396345 CASTP20810 708 aaKnown RBP22.47■■□□□ 1.19
HOXA9-202ENST00000396345 IKQ13123 557 aaPredicted RBP22.47■■□□□ 1.19
HOXA9-202ENST00000396345 POTEEQ6S8J3 1075 aa22.47■■□□□ 1.19
HOXA9-202ENST00000396345 TMTC2Q8N394 836 aa22.47■■□□□ 1.19
HOXA9-202ENST00000396345 PRPF38AQ8NAV1 312 aaKnown RBP22.47■■□□□ 1.19
HOXA9-202ENST00000396345 CHURC1Q8WUH1 139 aa22.47■■□□□ 1.19
HOXA9-202ENST00000396345 TCEANC2Q96MN5 208 aa22.47■■□□□ 1.19
HOXA9-202ENST00000396345 TXNRD2Q9NNW7 524 aa22.47■■□□□ 1.19
HOXA9-202ENST00000396345 GPCPD1Q9NPB8 672 aa22.47■■□□□ 1.19
HOXA9-202ENST00000396345 MORF4L1Q9UBU8 362 aa22.47■■□□□ 1.19
HOXA9-202ENST00000396345 FRMPD2Q68DX3 1309 aaPredicted RBP22.47■■□□□ 1.19
HOXA9-202ENST00000396345 PEX10O60683 326 aa22.46■■□□□ 1.19
HOXA9-202ENST00000396345 PLA2G6O60733 806 aa22.46■■□□□ 1.19
HOXA9-202ENST00000396345 LIFRP42702 1097 aa22.46■■□□□ 1.19
HOXA9-202ENST00000396345 STAT2P52630 851 aa22.46■■□□□ 1.19
HOXA9-202ENST00000396345 ANAPC15P60006 121 aa22.46■■□□□ 1.19
HOXA9-202ENST00000396345 ZNF543Q08ER8 600 aa22.46■■□□□ 1.19
HOXA9-202ENST00000396345 NFXL1Q6ZNB6 911 aa22.46■■□□□ 1.19
HOXA9-202ENST00000396345 CATIPQ7Z7H3 387 aa22.46■■□□□ 1.19
HOXA9-202ENST00000396345 FAM160B2Q86V87 743 aa22.46■■□□□ 1.19
HOXA9-202ENST00000396345 MB21D1Q8N884 522 aa22.46■■□□□ 1.19
HOXA9-202ENST00000396345 GPRC5AQ8NFJ5 357 aa22.46■■□□□ 1.19
HOXA9-202ENST00000396345 KIFC2Q96AC6 838 aa22.46■■□□□ 1.19
HOXA9-202ENST00000396345 ERO1AQ96HE7 468 aa22.46■■□□□ 1.19
HOXA9-202ENST00000396345 CCDC69A6NI79 296 aa22.45■■□□□ 1.18
HOXA9-202ENST00000396345 CNMDO75829 334 aa22.45■■□□□ 1.18
HOXA9-202ENST00000396345 RPS6KB1P23443 525 aa22.45■■□□□ 1.18
HOXA9-202ENST00000396345 ERVK-9P63128 1117 aa22.45■■□□□ 1.18
HOXA9-202ENST00000396345 ERVK-24P63145 666 aa22.45■■□□□ 1.18
HOXA9-202ENST00000396345 LACTBP83111 547 aaPredicted RBP22.45■■□□□ 1.18
HOXA9-202ENST00000396345 KIF22Q14807 665 aa22.45■■□□□ 1.18
HOXA9-202ENST00000396345 CD99L2Q8TCZ2 262 aa22.45■■□□□ 1.18
HOXA9-202ENST00000396345 TM6SF1Q9BZW5 370 aa22.45■■□□□ 1.18
HOXA9-202ENST00000396345 ZSWIM6Q9HCJ5 1215 aa22.45■■□□□ 1.18
HOXA9-202ENST00000396345 BTBD7Q9P203 1132 aa22.45■■□□□ 1.18
HOXA9-202ENST00000396345 ADAMTS5Q9UNA0 930 aa22.45■■□□□ 1.18
HOXA9-202ENST00000396345 VWA5AO00534 786 aa22.44■■□□□ 1.18
HOXA9-202ENST00000396345 PARP1P09874 1014 aaKnown RBP22.44■■□□□ 1.18
HOXA9-202ENST00000396345 FGD1P98174 961 aa22.44■■□□□ 1.18
HOXA9-202ENST00000396345 GPATCH4Q5T3I0 446 aaKnown RBP22.44■■□□□ 1.18
HOXA9-202ENST00000396345 TTBK2Q6IQ55 1244 aa22.44■■□□□ 1.18
HOXA9-202ENST00000396345 CYP46A1Q9Y6A2 500 aa22.44■■□□□ 1.18
HOXA9-202ENST00000396345 A0A0G2JMZ2 1700 aa22.43■■□□□ 1.18
HOXA9-202ENST00000396345 ZBED4O75132 1171 aa22.43■■□□□ 1.18
HOXA9-202ENST00000396345 GOLGA8HP0CJ92 632 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms