RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 KLRC3Q07444 240 aa20.73■□□□□ 0.91
UPK3A-202ENST00000396082 RRP12Q5JTH9 1297 aaKnown RBP20.73■□□□□ 0.91
UPK3A-202ENST00000396082 NUP88Q99567 741 aaPredicted RBP20.73■□□□□ 0.91
UPK3A-202ENST00000396082 SPATC1LQ9H0A9 340 aa20.73■□□□□ 0.91
UPK3A-202ENST00000396082 UNC93B1Q9H1C4 597 aa20.73■□□□□ 0.91
UPK3A-202ENST00000396082 INCENPQ9NQS7 918 aa20.73■□□□□ 0.91
UPK3A-202ENST00000396082 FBXO28Q9NVF7 368 aa20.73■□□□□ 0.91
UPK3A-202ENST00000396082 NKX2-3Q8TAU0 364 aa20.72■□□□□ 0.91
UPK3A-202ENST00000396082 MOV10L1Q9BXT6 1211 aaKnown RBP20.72■□□□□ 0.91
UPK3A-202ENST00000396082 STX8Q9UNK0 236 aa20.72■□□□□ 0.91
UPK3A-202ENST00000396082 COL11A1P12107 1806 aaPredicted RBP20.71■□□□□ 0.91
UPK3A-202ENST00000396082 ORC4O43929 436 aa20.71■□□□□ 0.91
UPK3A-202ENST00000396082 ZKSCAN1P17029 563 aaPredicted RBP20.71■□□□□ 0.91
UPK3A-202ENST00000396082 MKL1Q969V6 931 aa20.71■□□□□ 0.91
UPK3A-202ENST00000396082 APBA2Q99767 749 aa20.71■□□□□ 0.91
UPK3A-202ENST00000396082 SLF1Q9BQI6 1058 aa20.71■□□□□ 0.91
UPK3A-202ENST00000396082 PPP1R9AQ9ULJ8 1098 aa20.71■□□□□ 0.91
UPK3A-202ENST00000396082 SYNPO2Q9UMS6 1093 aa20.71■□□□□ 0.91
UPK3A-202ENST00000396082 CENPFP49454 3210 aa20.7■□□□□ 0.9
UPK3A-202ENST00000396082 SLC15A5A6NIM6 579 aa20.7■□□□□ 0.9
UPK3A-202ENST00000396082 GJB1P08034 283 aa20.7■□□□□ 0.9
UPK3A-202ENST00000396082 XRCC5P13010 732 aaKnown RBP20.7■□□□□ 0.9
UPK3A-202ENST00000396082 PTPREP23469 700 aa20.7■□□□□ 0.9
UPK3A-202ENST00000396082 MAP2K5Q13163 448 aa20.7■□□□□ 0.9
UPK3A-202ENST00000396082 MORN1Q5T089 497 aa20.7■□□□□ 0.9
UPK3A-202ENST00000396082 MFSD6Q6ZSS7 791 aa20.7■□□□□ 0.9
UPK3A-202ENST00000396082 NCAPG2Q86XI2 1143 aa20.7■□□□□ 0.9
UPK3A-202ENST00000396082 TRMT44Q8IYL2 757 aaKnown RBP20.7■□□□□ 0.9
UPK3A-202ENST00000396082 SHCBP1Q8NEM2 672 aa20.7■□□□□ 0.9
UPK3A-202ENST00000396082 TRIB2Q92519 343 aa20.7■□□□□ 0.9
UPK3A-202ENST00000396082 CTDP1Q9Y5B0 961 aaPredicted RBP20.7■□□□□ 0.9
UPK3A-202ENST00000396082 ZNF213O14771 459 aa20.69■□□□□ 0.9
UPK3A-202ENST00000396082 ERCC3P19447 782 aa20.69■□□□□ 0.9
UPK3A-202ENST00000396082 SLFN13Q68D06 897 aa20.69■□□□□ 0.9
UPK3A-202ENST00000396082 GMCL1P1Q8NEA9 526 aa20.69■□□□□ 0.9
UPK3A-202ENST00000396082 RNF41Q9H4P4 317 aaPredicted RBP20.69■□□□□ 0.9
UPK3A-202ENST00000396082 LAMA4Q16363 1823 aa20.69■□□□□ 0.9
UPK3A-202ENST00000396082 VWA5AO00534 786 aa20.68■□□□□ 0.9
UPK3A-202ENST00000396082 NMT2O60551 498 aa20.68■□□□□ 0.9
UPK3A-202ENST00000396082 FGRP09769 529 aa20.68■□□□□ 0.9
UPK3A-202ENST00000396082 PCP11498 1178 aaKnown RBP20.68■□□□□ 0.9
UPK3A-202ENST00000396082 GJA8P48165 433 aa20.68■□□□□ 0.9
UPK3A-202ENST00000396082 GRB14Q14449 540 aa20.68■□□□□ 0.9
UPK3A-202ENST00000396082 TMEM132BQ14DG7 1078 aa20.68■□□□□ 0.9
UPK3A-202ENST00000396082 AKNAD1Q5T1N1 836 aa20.68■□□□□ 0.9
UPK3A-202ENST00000396082 U2AF1L4Q8WU68 220 aaKnown RBP20.68■□□□□ 0.9
UPK3A-202ENST00000396082 RUFY2Q8WXA3 655 aa20.68■□□□□ 0.9
UPK3A-202ENST00000396082 USP6NLQ92738 828 aa20.68■□□□□ 0.9
UPK3A-202ENST00000396082 DSCC1Q9BVC3 393 aa20.68■□□□□ 0.9
UPK3A-202ENST00000396082 MROH8Q9H579 483 aa20.68■□□□□ 0.9
UPK3A-202ENST00000396082 TACC3Q9Y6A5 838 aa20.68■□□□□ 0.9
UPK3A-202ENST00000396082 BMP3P12645 472 aa20.67■□□□□ 0.9
UPK3A-202ENST00000396082 TRIM32Q13049 653 aa20.67■□□□□ 0.9
UPK3A-202ENST00000396082 DPP9Q86TI2 863 aa20.67■□□□□ 0.9
UPK3A-202ENST00000396082 TBC1D10CQ8IV04 446 aa20.67■□□□□ 0.9
UPK3A-202ENST00000396082 PRPF38AQ8NAV1 312 aaKnown RBP20.67■□□□□ 0.9
UPK3A-202ENST00000396082 STAG1Q8WVM7 1258 aa20.67■□□□□ 0.9
UPK3A-202ENST00000396082 KIFC2Q96AC6 838 aa20.67■□□□□ 0.9
UPK3A-202ENST00000396082 CHMP4CQ96CF2 233 aa20.67■□□□□ 0.9
UPK3A-202ENST00000396082 DEFB118Q96PH6 123 aa20.67■□□□□ 0.9
UPK3A-202ENST00000396082 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.67■□□□□ 0.9
UPK3A-202ENST00000396082 HMX1Q9NP08 348 aaPredicted RBP20.67■□□□□ 0.9
UPK3A-202ENST00000396082 IL17RBQ9NRM6 502 aa20.67■□□□□ 0.9
UPK3A-202ENST00000396082 FEM1BQ9UK73 627 aa20.67■□□□□ 0.9
UPK3A-202ENST00000396082 ADAMTS5Q9UNA0 930 aa20.67■□□□□ 0.9
UPK3A-202ENST00000396082 RAD50Q92878 1312 aa20.67■□□□□ 0.9
UPK3A-202ENST00000396082 STRNO43815 780 aa20.66■□□□□ 0.9
UPK3A-202ENST00000396082 SLC25A27O95847 323 aa20.66■□□□□ 0.9
UPK3A-202ENST00000396082 PRKAR2AP13861 404 aaKnown RBP20.66■□□□□ 0.9
UPK3A-202ENST00000396082 SLC1A4P43007 532 aa20.66■□□□□ 0.9
UPK3A-202ENST00000396082 IKQ13123 557 aaPredicted RBP20.66■□□□□ 0.9
UPK3A-202ENST00000396082 CCL14Q16627 93 aa20.66■□□□□ 0.9
UPK3A-202ENST00000396082 IMMTQ16891 758 aaKnown RBP20.66■□□□□ 0.9
UPK3A-202ENST00000396082 CENPQQ7L2Z9 268 aaPredicted RBP20.66■□□□□ 0.9
UPK3A-202ENST00000396082 SHISA4Q96DD7 197 aa20.66■□□□□ 0.9
UPK3A-202ENST00000396082 CTNNA3Q9UI47 895 aa20.66■□□□□ 0.9
UPK3A-202ENST00000396082 MTMR7Q9Y216 660 aa20.66■□□□□ 0.9
UPK3A-202ENST00000396082 RPTORQ8N122 1335 aa20.66■□□□□ 0.9
UPK3A-202ENST00000396082 ZNF236Q9UL36 1845 aa20.65■□□□□ 0.9
UPK3A-202ENST00000396082 ZBED4O75132 1171 aa20.65■□□□□ 0.9
UPK3A-202ENST00000396082 SGPL1O95470 568 aa20.65■□□□□ 0.9
UPK3A-202ENST00000396082 ADORA2AP29274 412 aa20.65■□□□□ 0.9
UPK3A-202ENST00000396082 COPB2P35606 906 aa20.65■□□□□ 0.9
UPK3A-202ENST00000396082 STAT3P40763 770 aa20.65■□□□□ 0.9
UPK3A-202ENST00000396082 RIOX2Q8IUF8 465 aa20.65■□□□□ 0.9
UPK3A-202ENST00000396082 NBPF3Q9H094 633 aa20.65■□□□□ 0.9
UPK3A-202ENST00000396082 PAK6Q9NQU5 681 aaPredicted RBP20.65■□□□□ 0.9
UPK3A-202ENST00000396082 NEDD4P46934 1319 aa20.64■□□□□ 0.89
UPK3A-202ENST00000396082 TMEM232C9JQI7 657 aa20.64■□□□□ 0.89
UPK3A-202ENST00000396082 TFRCP02786 760 aaKnown RBP20.64■□□□□ 0.89
UPK3A-202ENST00000396082 FCER1AP12319 257 aa20.64■□□□□ 0.89
UPK3A-202ENST00000396082 MCCP23508 829 aa20.64■□□□□ 0.89
UPK3A-202ENST00000396082 SLC4A3P48751 1232 aa20.64■□□□□ 0.89
UPK3A-202ENST00000396082 STAT2P52630 851 aa20.64■□□□□ 0.89
UPK3A-202ENST00000396082 MFSD14CQ5VZR4 134 aa20.64■□□□□ 0.89
UPK3A-202ENST00000396082 CPXCR1Q8N123 301 aa20.64■□□□□ 0.89
UPK3A-202ENST00000396082 ESR2Q92731 530 aa20.64■□□□□ 0.89
UPK3A-202ENST00000396082 GMCL1Q96IK5 515 aa20.64■□□□□ 0.89
UPK3A-202ENST00000396082 SLC5A4Q9NY91 659 aa20.64■□□□□ 0.89
UPK3A-202ENST00000396082 ZNF214Q9UL59 606 aaPredicted RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms