RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 FAM83BQ5T0W9 1011 aa16.34■□□□□ 0.21
CXCL12-205ENST00000395794 CCDC129Q6ZRS4 1044 aa16.34■□□□□ 0.21
CXCL12-205ENST00000395794 NCAPG2Q86XI2 1143 aa16.34■□□□□ 0.21
CXCL12-205ENST00000395794 ATG4CQ96DT6 458 aa16.34■□□□□ 0.21
CXCL12-205ENST00000395794 CRISPLD2Q9H0B8 497 aa16.34■□□□□ 0.21
CXCL12-205ENST00000395794 SLC5A4Q9NY91 659 aa16.34■□□□□ 0.21
CXCL12-205ENST00000395794 MYH8P13535 1937 aa16.34■□□□□ 0.21
CXCL12-205ENST00000395794 PDE4DIPQ5VU43 2346 aa16.34■□□□□ 0.21
CXCL12-205ENST00000395794 BRCA2P51587 3418 aa16.33■□□□□ 0.2
CXCL12-205ENST00000395794 F5H6K3 240 aa16.33■□□□□ 0.2
CXCL12-205ENST00000395794 SLC25A27O95847 323 aa16.33■□□□□ 0.2
CXCL12-205ENST00000395794 TTLL1O95922 423 aa16.33■□□□□ 0.2
CXCL12-205ENST00000395794 MYCNP04198 464 aaPredicted RBP16.33■□□□□ 0.2
CXCL12-205ENST00000395794 ERCC3P19447 782 aa16.33■□□□□ 0.2
CXCL12-205ENST00000395794 TFAP4Q01664 338 aa16.33■□□□□ 0.2
CXCL12-205ENST00000395794 KLRC3Q07444 240 aa16.33■□□□□ 0.2
CXCL12-205ENST00000395794 GRB14Q14449 540 aa16.33■□□□□ 0.2
CXCL12-205ENST00000395794 MAP3K21Q5TCX8 1036 aa16.33■□□□□ 0.2
CXCL12-205ENST00000395794 ANKLE1Q8NAG6 615 aa16.33■□□□□ 0.2
CXCL12-205ENST00000395794 SYNPO2Q9UMS6 1093 aa16.33■□□□□ 0.2
CXCL12-205ENST00000395794 CTDP1Q9Y5B0 961 aaPredicted RBP16.33■□□□□ 0.2
CXCL12-205ENST00000395794 HOXC6P09630 235 aa16.32■□□□□ 0.2
CXCL12-205ENST00000395794 MFAP1P55081 439 aaKnown RBP16.32■□□□□ 0.2
CXCL12-205ENST00000395794 CACNB2Q08289 660 aaPredicted RBP16.32■□□□□ 0.2
CXCL12-205ENST00000395794 CCL14Q16627 93 aa16.32■□□□□ 0.2
CXCL12-205ENST00000395794 CHRDL2Q6WN34 429 aa16.32■□□□□ 0.2
CXCL12-205ENST00000395794 NECAB2Q7Z6G3 386 aa16.32■□□□□ 0.2
CXCL12-205ENST00000395794 NEDD1Q8NHV4 660 aa16.32■□□□□ 0.2
CXCL12-205ENST00000395794 CEP95Q96GE4 821 aa16.32■□□□□ 0.2
CXCL12-205ENST00000395794 FBXO28Q9NVF7 368 aa16.32■□□□□ 0.2
CXCL12-205ENST00000395794 MTMR4Q9NYA4 1195 aa16.32■□□□□ 0.2
CXCL12-205ENST00000395794 PPP1R9AQ9ULJ8 1098 aa16.32■□□□□ 0.2
CXCL12-205ENST00000395794 NR2E3Q9Y5X4 410 aa16.32■□□□□ 0.2
CXCL12-205ENST00000395794 IGKV6D-41A0A0C4DH26 115 aa16.31■□□□□ 0.2
CXCL12-205ENST00000395794 TSPY2A6NKD2 308 aa16.31■□□□□ 0.2
CXCL12-205ENST00000395794 VWA5AO00534 786 aa16.31■□□□□ 0.2
CXCL12-205ENST00000395794 NDUFB10O96000 172 aa16.31■□□□□ 0.2
CXCL12-205ENST00000395794 FCER1AP12319 257 aa16.31■□□□□ 0.2
CXCL12-205ENST00000395794 ADORA2AP29274 412 aa16.31■□□□□ 0.2
CXCL12-205ENST00000395794 COPB2P35606 906 aa16.31■□□□□ 0.2
CXCL12-205ENST00000395794 TMEM132BQ14DG7 1078 aa16.31■□□□□ 0.2
CXCL12-205ENST00000395794 FAM47AQ5JRC9 791 aa16.31■□□□□ 0.2
CXCL12-205ENST00000395794 UBE2Q1Q7Z7E8 422 aa16.31■□□□□ 0.2
CXCL12-205ENST00000395794 MKL1Q969V6 931 aa16.31■□□□□ 0.2
CXCL12-205ENST00000395794 FAM227BQ96M60 508 aa16.31■□□□□ 0.2
CXCL12-205ENST00000395794 SLF1Q9BQI6 1058 aa16.31■□□□□ 0.2
CXCL12-205ENST00000395794 ISY1Q9ULR0 285 aaKnown RBP16.31■□□□□ 0.2
CXCL12-205ENST00000395794 ADAMTS5Q9UNA0 930 aa16.31■□□□□ 0.2
CXCL12-205ENST00000395794 STAT3P40763 770 aa16.3■□□□□ 0.2
CXCL12-205ENST00000395794 CTDSPL2Q05D32 466 aa16.3■□□□□ 0.2
CXCL12-205ENST00000395794 ALX1Q15699 326 aa16.3■□□□□ 0.2
CXCL12-205ENST00000395794 VPS53Q5VIR6 699 aa16.3■□□□□ 0.2
CXCL12-205ENST00000395794 PLEKHM2Q8IWE5 1019 aa16.3■□□□□ 0.2
CXCL12-205ENST00000395794 ABRAQ8N0Z2 381 aa16.3■□□□□ 0.2
CXCL12-205ENST00000395794 PRPF38AQ8NAV1 312 aaKnown RBP16.3■□□□□ 0.2
CXCL12-205ENST00000395794 PAWRQ96IZ0 340 aaKnown RBP16.3■□□□□ 0.2
CXCL12-205ENST00000395794 NUP88Q99567 741 aaPredicted RBP16.3■□□□□ 0.2
CXCL12-205ENST00000395794 NBPF3Q9H094 633 aa16.3■□□□□ 0.2
CXCL12-205ENST00000395794 OSBPL3Q9H4L5 887 aa16.3■□□□□ 0.2
CXCL12-205ENST00000395794 MKI67P46013 3256 aaKnown RBP16.3■□□□□ 0.2
CXCL12-205ENST00000395794 A0A0D9SFI3 127 aa16.29■□□□□ 0.2
CXCL12-205ENST00000395794 H0YGN5 161 aa16.29■□□□□ 0.2
CXCL12-205ENST00000395794 HIP1O00291 1037 aa16.29■□□□□ 0.2
CXCL12-205ENST00000395794 EVI5O60447 810 aa16.29■□□□□ 0.2
CXCL12-205ENST00000395794 RANBP6O60518 1105 aaKnown RBP16.29■□□□□ 0.2
CXCL12-205ENST00000395794 ZBED4O75132 1171 aa16.29■□□□□ 0.2
CXCL12-205ENST00000395794 CNGA1P29973 690 aa16.29■□□□□ 0.2
CXCL12-205ENST00000395794 NMIQ13287 307 aaPredicted RBP16.29■□□□□ 0.2
CXCL12-205ENST00000395794 KCTD2Q14681 263 aa16.29■□□□□ 0.2
CXCL12-205ENST00000395794 SLFN13Q68D06 897 aa16.29■□□□□ 0.2
CXCL12-205ENST00000395794 RIOX2Q8IUF8 465 aa16.29■□□□□ 0.2
CXCL12-205ENST00000395794 LRRC47Q8N1G4 583 aaKnown RBP16.29■□□□□ 0.2
CXCL12-205ENST00000395794 GMCL1P1Q8NEA9 526 aa16.29■□□□□ 0.2
CXCL12-205ENST00000395794 MMP19Q99542 508 aa16.29■□□□□ 0.2
CXCL12-205ENST00000395794 TOMM22Q9NS69 142 aa16.29■□□□□ 0.2
CXCL12-205ENST00000395794 DIAPH3Q9NSV4 1193 aa16.29■□□□□ 0.2
CXCL12-205ENST00000395794 ANAPC4Q9UJX5 808 aa16.29■□□□□ 0.2
CXCL12-205ENST00000395794 FEM1BQ9UK73 627 aa16.29■□□□□ 0.2
CXCL12-205ENST00000395794 OGDHLQ9ULD0 1010 aa16.29■□□□□ 0.2
CXCL12-205ENST00000395794 STX8Q9UNK0 236 aa16.29■□□□□ 0.2
CXCL12-205ENST00000395794 DOCK3Q8IZD9 2030 aa16.29■□□□□ 0.2
CXCL12-205ENST00000395794 PLXNB2O15031 1838 aa16.29■□□□□ 0.2
CXCL12-205ENST00000395794 PLIN4Q96Q06 1357 aa16.28■□□□□ 0.2
CXCL12-205ENST00000395794 CCDC171Q6TFL3 1326 aa16.28■□□□□ 0.2
CXCL12-205ENST00000395794 MSCO60682 206 aa16.28■□□□□ 0.2
CXCL12-205ENST00000395794 FGAP02671 866 aa16.28■□□□□ 0.2
CXCL12-205ENST00000395794 SDSP20132 328 aa16.28■□□□□ 0.2
CXCL12-205ENST00000395794 CCND3P30281 292 aaPredicted RBP16.28■□□□□ 0.2
CXCL12-205ENST00000395794 OLFML2BQ68BL8 750 aa16.28■□□□□ 0.2
CXCL12-205ENST00000395794 NPLOC4Q8TAT6 608 aa16.28■□□□□ 0.2
CXCL12-205ENST00000395794 KIFC2Q96AC6 838 aa16.28■□□□□ 0.2
CXCL12-205ENST00000395794 TEX13BQ9BXU2 312 aa16.28■□□□□ 0.2
CXCL12-205ENST00000395794 FLRT1Q9NZU1 646 aa16.28■□□□□ 0.2
CXCL12-205ENST00000395794 FOXP2O15409 715 aa16.27■□□□□ 0.2
CXCL12-205ENST00000395794 HSPD1P10809 573 aaKnown RBP16.27■□□□□ 0.2
CXCL12-205ENST00000395794 BMP3P12645 472 aa16.27■□□□□ 0.2
CXCL12-205ENST00000395794 CYP2C19P33261 490 aa16.27■□□□□ 0.2
CXCL12-205ENST00000395794 SLC4A3P48751 1232 aa16.27■□□□□ 0.2
CXCL12-205ENST00000395794 IKQ13123 557 aaPredicted RBP16.27■□□□□ 0.2
CXCL12-205ENST00000395794 C11orf49Q9H6J7 331 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms