RNA–Protein interactions for RNA: ENST00000394945.5

SPOCK1-202, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOCK1, Length 4,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-202ENST00000394945 POLR3EQ9NVU0 708 aa17.18■□□□□ 0.34
SPOCK1-202ENST00000394945 VPS54Q9P1Q0 977 aa17.18■□□□□ 0.34
SPOCK1-202ENST00000394945 USH1CQ9Y6N9 552 aa17.18■□□□□ 0.34
SPOCK1-202ENST00000394945 EHHADHQ08426 723 aa17.17■□□□□ 0.34
SPOCK1-202ENST00000394945 DDX27Q96GQ7 796 aaKnown RBP17.17■□□□□ 0.34
SPOCK1-202ENST00000394945 BTBD18B2RXH4 712 aa17.17■□□□□ 0.34
SPOCK1-202ENST00000394945 TEX11Q8IYF3 940 aa17.17■□□□□ 0.34
SPOCK1-202ENST00000394945 LINC00301Q8NCQ3 95 aa17.17■□□□□ 0.34
SPOCK1-202ENST00000394945 VCX3AQ9NNX9 186 aa17.17■□□□□ 0.34
SPOCK1-202ENST00000394945 MCM9Q9NXL9 1143 aa17.17■□□□□ 0.34
SPOCK1-202ENST00000394945 COMMD10Q9Y6G5 202 aa17.17■□□□□ 0.34
SPOCK1-202ENST00000394945 hCG_1642624A0A1W2PR95 340 aa17.17■□□□□ 0.34
SPOCK1-202ENST00000394945 PSMD6Q15008 389 aa17.17■□□□□ 0.34
SPOCK1-202ENST00000394945 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.17■□□□□ 0.34
SPOCK1-202ENST00000394945 SAMD9Q5K651 1589 aa17.17■□□□□ 0.34
SPOCK1-202ENST00000394945 C2orf54Q08AI8 447 aa17.17■□□□□ 0.34
SPOCK1-202ENST00000394945 LRRC23Q53EV4 343 aaPredicted RBP17.17■□□□□ 0.34
SPOCK1-202ENST00000394945 HERC4Q5GLZ8 1057 aaPredicted RBP17.17■□□□□ 0.34
SPOCK1-202ENST00000394945 FRMD4BQ9Y2L6 1034 aa17.17■□□□□ 0.34
SPOCK1-202ENST00000394945 CCDC152Q4G0S7 254 aa17.16■□□□□ 0.34
SPOCK1-202ENST00000394945 NSUN7Q8NE18 718 aaKnown RBP17.16■□□□□ 0.34
SPOCK1-202ENST00000394945 DNAI2Q9GZS0 605 aa17.16■□□□□ 0.34
SPOCK1-202ENST00000394945 GAS8O95995 478 aa17.16■□□□□ 0.34
SPOCK1-202ENST00000394945 BABAM1Q9NWV8 329 aa17.16■□□□□ 0.34
SPOCK1-202ENST00000394945 HOXB7P09629 217 aa17.16■□□□□ 0.34
SPOCK1-202ENST00000394945 PPP2R5BQ15173 497 aa17.16■□□□□ 0.34
SPOCK1-202ENST00000394945 FAM133BQ5BKY9 247 aaKnown RBP17.16■□□□□ 0.34
SPOCK1-202ENST00000394945 CFAP61Q8NHU2 1237 aa17.16■□□□□ 0.34
SPOCK1-202ENST00000394945 PHF23Q9BUL5 403 aaPredicted RBP17.16■□□□□ 0.34
SPOCK1-202ENST00000394945 EEF2KMTQ96G04 330 aa17.16■□□□□ 0.34
SPOCK1-202ENST00000394945 NUF2Q9BZD4 464 aa17.16■□□□□ 0.34
SPOCK1-202ENST00000394945 ACTN3Q08043 901 aaPredicted RBP17.15■□□□□ 0.34
SPOCK1-202ENST00000394945 GSDMBQ8TAX9 411 aa17.15■□□□□ 0.34
SPOCK1-202ENST00000394945 LRWD1Q9UFC0 647 aa17.15■□□□□ 0.34
SPOCK1-202ENST00000394945 I3L4J1 428 aa17.15■□□□□ 0.34
SPOCK1-202ENST00000394945 IMPG2Q9BZV3 1241 aa17.15■□□□□ 0.34
SPOCK1-202ENST00000394945 OSBPL5Q9H0X9 879 aaPredicted RBP17.15■□□□□ 0.34
SPOCK1-202ENST00000394945 KCNF1Q9H3M0 494 aa17.15■□□□□ 0.34
SPOCK1-202ENST00000394945 TAF5LO75529 589 aa17.15■□□□□ 0.34
SPOCK1-202ENST00000394945 PLS1Q14651 629 aa17.15■□□□□ 0.34
SPOCK1-202ENST00000394945 ENOX1Q8TC92 643 aaKnown RBP17.15■□□□□ 0.34
SPOCK1-202ENST00000394945 ARMT1Q9H993 441 aa17.15■□□□□ 0.34
SPOCK1-202ENST00000394945 SAMSN1Q9NSI8 373 aaKnown RBP17.15■□□□□ 0.34
SPOCK1-202ENST00000394945 CD2APQ9Y5K6 639 aa17.15■□□□□ 0.34
SPOCK1-202ENST00000394945 PTPRTO14522 1441 aa17.15■□□□□ 0.34
SPOCK1-202ENST00000394945 CCNT1O60563 726 aaKnown RBP17.14■□□□□ 0.34
SPOCK1-202ENST00000394945 RESTQ13127 1097 aa17.14■□□□□ 0.34
SPOCK1-202ENST00000394945 NFATC2IPQ8NCF5 419 aa17.14■□□□□ 0.34
SPOCK1-202ENST00000394945 DNMT1P26358 1616 aaKnown RBP17.14■□□□□ 0.33
SPOCK1-202ENST00000394945 CABP7Q86V35 215 aa17.14■□□□□ 0.33
SPOCK1-202ENST00000394945 NELFCDQ8IXH7 590 aa17.14■□□□□ 0.33
SPOCK1-202ENST00000394945 XAGE2Q96GT9 111 aa17.14■□□□□ 0.33
SPOCK1-202ENST00000394945 RILPQ96NA2 401 aa17.14■□□□□ 0.33
SPOCK1-202ENST00000394945 GSDMAQ96QA5 445 aa17.14■□□□□ 0.33
SPOCK1-202ENST00000394945 PANX2Q96RD6 677 aa17.14■□□□□ 0.33
SPOCK1-202ENST00000394945 TSC22D3Q99576 134 aa17.14■□□□□ 0.33
SPOCK1-202ENST00000394945 NOP53Q9NZM5 478 aaKnown RBP17.14■□□□□ 0.33
SPOCK1-202ENST00000394945 MAP3K19Q56UN5 1328 aa17.14■□□□□ 0.33
SPOCK1-202ENST00000394945 PRDM1O75626 825 aa17.14■□□□□ 0.33
SPOCK1-202ENST00000394945 TBC1D1Q86TI0 1168 aaPredicted RBP17.14■□□□□ 0.33
SPOCK1-202ENST00000394945 CXorf56Q9H5V9 222 aa17.14■□□□□ 0.33
SPOCK1-202ENST00000394945 ARHGAP42A6NI28 874 aa17.14■□□□□ 0.33
SPOCK1-202ENST00000394945 GTPBP6O43824 516 aaPredicted RBP17.14■□□□□ 0.33
SPOCK1-202ENST00000394945 TBC1D8O95759 1140 aa17.14■□□□□ 0.33
SPOCK1-202ENST00000394945 CXCR5P32302 372 aa17.14■□□□□ 0.33
SPOCK1-202ENST00000394945 FNBP4Q8N3X1 1017 aaPredicted RBP17.14■□□□□ 0.33
SPOCK1-202ENST00000394945 SCOCQ9UIL1 159 aa17.14■□□□□ 0.33
SPOCK1-202ENST00000394945 FAF1Q9UNN5 650 aaPredicted RBP17.14■□□□□ 0.33
SPOCK1-202ENST00000394945 RABGAP1Q9Y3P9 1069 aa17.14■□□□□ 0.33
SPOCK1-202ENST00000394945 PPP6R2O75170 966 aa17.13■□□□□ 0.33
SPOCK1-202ENST00000394945 SLFN14P0C7P3 912 aa17.13■□□□□ 0.33
SPOCK1-202ENST00000394945 RASSF7Q02833 373 aa17.13■□□□□ 0.33
SPOCK1-202ENST00000394945 EMBQ6PCB8 327 aa17.13■□□□□ 0.33
SPOCK1-202ENST00000394945 ADAT2Q7Z6V5 191 aaKnown RBP17.13■□□□□ 0.33
SPOCK1-202ENST00000394945 CCDC13Q8IYE1 715 aa17.13■□□□□ 0.33
SPOCK1-202ENST00000394945 U2AF1L4Q8WU68 220 aaKnown RBP17.13■□□□□ 0.33
SPOCK1-202ENST00000394945 METTL22Q9BUU2 404 aaPredicted RBP17.13■□□□□ 0.33
SPOCK1-202ENST00000394945 LSM14BQ9BX40 385 aaKnown RBP17.13■□□□□ 0.33
SPOCK1-202ENST00000394945 ZBTB12Q9Y330 459 aaPredicted RBP17.13■□□□□ 0.33
SPOCK1-202ENST00000394945 DDX23Q9BUQ8 820 aaKnown RBP17.13■□□□□ 0.33
SPOCK1-202ENST00000394945 VPS37BQ9H9H4 285 aa17.13■□□□□ 0.33
SPOCK1-202ENST00000394945 HSPD1P10809 573 aaKnown RBP17.13■□□□□ 0.33
SPOCK1-202ENST00000394945 ST5P78524 1137 aa17.13■□□□□ 0.33
SPOCK1-202ENST00000394945 BIRC2Q13490 618 aa17.13■□□□□ 0.33
SPOCK1-202ENST00000394945 SNX29Q8TEQ0 813 aa17.13■□□□□ 0.33
SPOCK1-202ENST00000394945 COBLO75128 1261 aa17.13■□□□□ 0.33
SPOCK1-202ENST00000394945 IRX4P78413 519 aa17.13■□□□□ 0.33
SPOCK1-202ENST00000394945 CTDSPL2Q05D32 466 aa17.13■□□□□ 0.33
SPOCK1-202ENST00000394945 DBN1Q16643 649 aa17.13■□□□□ 0.33
SPOCK1-202ENST00000394945 TBC1D7Q9P0N9 293 aa17.13■□□□□ 0.33
SPOCK1-202ENST00000394945 PPP1R9AQ9ULJ8 1098 aa17.13■□□□□ 0.33
SPOCK1-202ENST00000394945 ADCY9O60503 1353 aa17.13■□□□□ 0.33
SPOCK1-202ENST00000394945 CTIFO43310 598 aaKnown RBP17.12■□□□□ 0.33
SPOCK1-202ENST00000394945 ABCB4P21439 1286 aa17.12■□□□□ 0.33
SPOCK1-202ENST00000394945 NBPF9Q3BBW0 867 aa17.12■□□□□ 0.33
SPOCK1-202ENST00000394945 KSR1Q8IVT5 923 aa17.12■□□□□ 0.33
SPOCK1-202ENST00000394945 CABLES1Q8TDN4 633 aa17.12■□□□□ 0.33
SPOCK1-202ENST00000394945 MAGI2Q86UL8 1455 aa17.12■□□□□ 0.33
SPOCK1-202ENST00000394945 SPDYE3A6NKU9 549 aa17.12■□□□□ 0.33
SPOCK1-202ENST00000394945 NDUFA10O95299 355 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms