RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 PCOLCE2Q9UKZ9 415 aa2.73□□□□□ -1.97
RNU6-440P-201ENST00000390882 PCDHGB7Q9Y5F8 929 aa2.73□□□□□ -1.97
RNU6-440P-201ENST00000390882 CSADQ9Y600 493 aa2.73□□□□□ -1.97
RNU6-440P-201ENST00000390882 PI3P19957 117 aa2.72□□□□□ -1.97
RNU6-440P-201ENST00000390882 CDK8P49336 464 aa2.72□□□□□ -1.97
RNU6-440P-201ENST00000390882 ZNF165P49910 485 aa2.72□□□□□ -1.97
RNU6-440P-201ENST00000390882 ATXN1P54253 815 aaKnown RBP2.72□□□□□ -1.97
RNU6-440P-201ENST00000390882 PDE4BQ07343 736 aa2.72□□□□□ -1.97
RNU6-440P-201ENST00000390882 APOBRQ0VD83 1088 aa2.72□□□□□ -1.97
RNU6-440P-201ENST00000390882 PAK2Q13177 524 aa2.72□□□□□ -1.97
RNU6-440P-201ENST00000390882 GNL2Q13823 731 aaKnown RBP2.72□□□□□ -1.97
RNU6-440P-201ENST00000390882 TTLL4Q14679 1199 aa2.72□□□□□ -1.97
RNU6-440P-201ENST00000390882 CWF19L2Q2TBE0 894 aaKnown RBP2.72□□□□□ -1.97
RNU6-440P-201ENST00000390882 PPM1JQ5JR12 505 aa2.72□□□□□ -1.97
RNU6-440P-201ENST00000390882 WIPI1Q5MNZ9 446 aaPredicted RBP2.72□□□□□ -1.97
RNU6-440P-201ENST00000390882 ZFYVE27Q5T4F4 411 aa2.72□□□□□ -1.97
RNU6-440P-201ENST00000390882 PDZRN4Q6ZMN7 1036 aaPredicted RBP2.72□□□□□ -1.97
RNU6-440P-201ENST00000390882 CDC37L1Q7L3B6 337 aa2.72□□□□□ -1.97
RNU6-440P-201ENST00000390882 FAM214BQ7L5A3 538 aa2.72□□□□□ -1.97
RNU6-440P-201ENST00000390882 ZNF605Q86T29 641 aa2.72□□□□□ -1.97
RNU6-440P-201ENST00000390882 TTC6Q86TZ1 520 aa2.72□□□□□ -1.97
RNU6-440P-201ENST00000390882 VPS37DQ86XT2 251 aa2.72□□□□□ -1.97
RNU6-440P-201ENST00000390882 SLITRK4Q8IW52 837 aa2.72□□□□□ -1.97
RNU6-440P-201ENST00000390882 KCT2Q8NC54 265 aa2.72□□□□□ -1.97
RNU6-440P-201ENST00000390882 PANK1Q8TE04 598 aa2.72□□□□□ -1.97
RNU6-440P-201ENST00000390882 ALPK1Q96QP1 1244 aa2.72□□□□□ -1.97
RNU6-440P-201ENST00000390882 SGPP1Q9BX95 441 aa2.72□□□□□ -1.97
RNU6-440P-201ENST00000390882 LRRC3Q9BY71 257 aa2.72□□□□□ -1.97
RNU6-440P-201ENST00000390882 ACBD3Q9H3P7 528 aa2.72□□□□□ -1.97
RNU6-440P-201ENST00000390882 UBP1Q9NZI7 540 aa2.72□□□□□ -1.97
RNU6-440P-201ENST00000390882 INPP5FQ9Y2H2 1132 aa2.72□□□□□ -1.97
RNU6-440P-201ENST00000390882 TNFRSF18Q9Y5U5 241 aa2.72□□□□□ -1.97
RNU6-440P-201ENST00000390882 PRR36Q9H6K5 1346 aa2.71□□□□□ -1.98
RNU6-440P-201ENST00000390882 PRAMEF27A3QJZ7 478 aa2.71□□□□□ -1.98
RNU6-440P-201ENST00000390882 TLR3O15455 904 aaKnown RBP2.71□□□□□ -1.98
RNU6-440P-201ENST00000390882 PRICKLE3O43900 615 aaPredicted RBP2.71□□□□□ -1.98
RNU6-440P-201ENST00000390882 ATE1O95260 518 aa2.71□□□□□ -1.98
RNU6-440P-201ENST00000390882 HCLS1P14317 486 aaPredicted RBP2.71□□□□□ -1.98
RNU6-440P-201ENST00000390882 MCM4P33991 863 aa2.71□□□□□ -1.98
RNU6-440P-201ENST00000390882 GJA8P48165 433 aa2.71□□□□□ -1.98
RNU6-440P-201ENST00000390882 ETF1P62495 437 aaKnown RBP2.71□□□□□ -1.98
RNU6-440P-201ENST00000390882 COL9A2Q14055 689 aaPredicted RBP2.71□□□□□ -1.98
RNU6-440P-201ENST00000390882 SEZ6Q53EL9 994 aa2.71□□□□□ -1.98
RNU6-440P-201ENST00000390882 ZBTB37Q5TC79 503 aa2.71□□□□□ -1.98
RNU6-440P-201ENST00000390882 REC114Q7Z4M0 266 aa2.71□□□□□ -1.98
RNU6-440P-201ENST00000390882 ZNF575Q86XF7 245 aa2.71□□□□□ -1.98
RNU6-440P-201ENST00000390882 HID1Q8IV36 788 aa2.71□□□□□ -1.98
RNU6-440P-201ENST00000390882 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.71□□□□□ -1.98
RNU6-440P-201ENST00000390882 REXO1Q8N1G1 1221 aaKnown RBP2.71□□□□□ -1.98
RNU6-440P-201ENST00000390882 TOP6BLQ8N6T0 577 aa2.71□□□□□ -1.98
RNU6-440P-201ENST00000390882 SLC43A3Q8NBI5 491 aa2.71□□□□□ -1.98
RNU6-440P-201ENST00000390882 FBXO27Q8NI29 283 aa2.71□□□□□ -1.98
RNU6-440P-201ENST00000390882 RASGRP4Q8TDF6 673 aa2.71□□□□□ -1.98
RNU6-440P-201ENST00000390882 ISL2Q96A47 359 aa2.71□□□□□ -1.98
RNU6-440P-201ENST00000390882 GPRASP2Q96D09 838 aa2.71□□□□□ -1.98
RNU6-440P-201ENST00000390882 SIGLEC10Q96LC7 697 aa2.71□□□□□ -1.98
RNU6-440P-201ENST00000390882 ZNF552Q9H707 407 aaPredicted RBP2.71□□□□□ -1.98
RNU6-440P-201ENST00000390882 EHMT1Q9H9B1 1298 aa2.71□□□□□ -1.98
RNU6-440P-201ENST00000390882 CAPN10Q9HC96 672 aa2.71□□□□□ -1.98
RNU6-440P-201ENST00000390882 BRMS1Q9HCU9 246 aa2.71□□□□□ -1.98
RNU6-440P-201ENST00000390882 IRAK3Q9Y616 596 aa2.71□□□□□ -1.98
RNU6-440P-201ENST00000390882 GNAT3A8MTJ3 354 aa2.7□□□□□ -1.98
RNU6-440P-201ENST00000390882 PGRP06401 933 aa2.7□□□□□ -1.98
RNU6-440P-201ENST00000390882 NEFMP07197 916 aa2.7□□□□□ -1.98
RNU6-440P-201ENST00000390882 PLCG1P19174 1290 aa2.7□□□□□ -1.98
RNU6-440P-201ENST00000390882 TACR2P21452 398 aa2.7□□□□□ -1.98
RNU6-440P-201ENST00000390882 GRK4P32298 578 aa2.7□□□□□ -1.98
RNU6-440P-201ENST00000390882 NTF4P34130 210 aa2.7□□□□□ -1.98
RNU6-440P-201ENST00000390882 CRKP46108 304 aa2.7□□□□□ -1.98
RNU6-440P-201ENST00000390882 TNNI2P48788 182 aa2.7□□□□□ -1.98
RNU6-440P-201ENST00000390882 ERVFC1P60507 584 aa2.7□□□□□ -1.98
RNU6-440P-201ENST00000390882 ZC3H6P61129 1189 aaKnown RBP2.7□□□□□ -1.98
RNU6-440P-201ENST00000390882 MLECQ14165 292 aa2.7□□□□□ -1.98
RNU6-440P-201ENST00000390882 VMACQ2NL98 169 aa2.7□□□□□ -1.98
RNU6-440P-201ENST00000390882 LRRFIP1Q32MZ4 808 aaKnown RBP2.7□□□□□ -1.98
RNU6-440P-201ENST00000390882 TMEM201Q5SNT2 666 aa2.7□□□□□ -1.98
RNU6-440P-201ENST00000390882 SLC6A19Q695T7 634 aa2.7□□□□□ -1.98
RNU6-440P-201ENST00000390882 MCATQ8IVS2 390 aaKnown RBP2.7□□□□□ -1.98
RNU6-440P-201ENST00000390882 SEC16BQ96JE7 1060 aa2.7□□□□□ -1.98
RNU6-440P-201ENST00000390882 SLC6A17Q9H1V8 727 aa2.7□□□□□ -1.98
RNU6-440P-201ENST00000390882 ATP13A1Q9HD20 1204 aa2.7□□□□□ -1.98
RNU6-440P-201ENST00000390882 ADAM30Q9UKF2 790 aa2.7□□□□□ -1.98
RNU6-440P-201ENST00000390882 POLR3KQ9Y2Y1 108 aaPredicted RBP2.7□□□□□ -1.98
RNU6-440P-201ENST00000390882 PCDHB14Q9Y5E9 798 aa2.7□□□□□ -1.98
RNU6-440P-201ENST00000390882 CORINQ9Y5Q5 1042 aa2.7□□□□□ -1.98
RNU6-440P-201ENST00000390882 PCSK5Q92824 1860 aa2.69□□□□□ -1.98
RNU6-440P-201ENST00000390882 LRIG2O94898 1065 aa2.69□□□□□ -1.98
RNU6-440P-201ENST00000390882 HTR3BO95264 441 aa2.69□□□□□ -1.98
RNU6-440P-201ENST00000390882 HPXP02790 462 aa2.69□□□□□ -1.98
RNU6-440P-201ENST00000390882 IMPDH2P12268 514 aa2.69□□□□□ -1.98
RNU6-440P-201ENST00000390882 ATF4P18848 351 aaPredicted RBP2.69□□□□□ -1.98
RNU6-440P-201ENST00000390882 CAP2P40123 477 aa2.69□□□□□ -1.98
RNU6-440P-201ENST00000390882 ARID5AQ03989 594 aa2.69□□□□□ -1.98
RNU6-440P-201ENST00000390882 CLCQ05315 142 aa2.69□□□□□ -1.98
RNU6-440P-201ENST00000390882 SLBPQ14493 270 aaKnown RBP eCLIP2.69□□□□□ -1.98
RNU6-440P-201ENST00000390882 NAALADL2Q58DX5 795 aa2.69□□□□□ -1.98
RNU6-440P-201ENST00000390882 CPZQ66K79 652 aa2.69□□□□□ -1.98
RNU6-440P-201ENST00000390882 GK5Q6ZS86 529 aa2.69□□□□□ -1.98
RNU6-440P-201ENST00000390882 USP51Q70EK9 711 aa2.69□□□□□ -1.98
RNU6-440P-201ENST00000390882 MRPL41Q8IXM3 137 aaKnown RBP2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms