RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 RGS13O14921 159 aa4.8□□□□□ -1.64
RNU6-1040P-201ENST00000383974 TLR3O15455 904 aaKnown RBP4.8□□□□□ -1.64
RNU6-1040P-201ENST00000383974 RPL10P27635 214 aaKnown RBP4.8□□□□□ -1.64
RNU6-1040P-201ENST00000383974 CHMP4BP1P59074 171 aa4.8□□□□□ -1.64
RNU6-1040P-201ENST00000383974 ARSHQ5FYA8 562 aa4.8□□□□□ -1.64
RNU6-1040P-201ENST00000383974 ADGRF1Q5T601 910 aa4.8□□□□□ -1.64
RNU6-1040P-201ENST00000383974 TMEM132EQ6IEE7 984 aa4.8□□□□□ -1.64
RNU6-1040P-201ENST00000383974 RNF111Q6ZNA4 994 aa4.8□□□□□ -1.64
RNU6-1040P-201ENST00000383974 WAPLQ7Z5K2 1190 aa4.8□□□□□ -1.64
RNU6-1040P-201ENST00000383974 NLRX1Q86UT6 975 aa4.8□□□□□ -1.64
RNU6-1040P-201ENST00000383974 SIRT2Q8IXJ6 389 aa4.8□□□□□ -1.64
RNU6-1040P-201ENST00000383974 SYTL5Q8TDW5 730 aaPredicted RBP4.8□□□□□ -1.64
RNU6-1040P-201ENST00000383974 FOXP3Q9BZS1 431 aa4.8□□□□□ -1.64
RNU6-1040P-201ENST00000383974 ASCC2Q9H1I8 757 aaPredicted RBP4.8□□□□□ -1.64
RNU6-1040P-201ENST00000383974 KBTBD4Q9NVX7 518 aa4.8□□□□□ -1.64
RNU6-1040P-201ENST00000383974 SLC22A31A6NKX4 558 aa4.79□□□□□ -1.64
RNU6-1040P-201ENST00000383974 RAG1P15918 1043 aa4.79□□□□□ -1.64
RNU6-1040P-201ENST00000383974 POLR2BP30876 1174 aaKnown RBP4.79□□□□□ -1.64
RNU6-1040P-201ENST00000383974 CTSWP56202 376 aa4.79□□□□□ -1.64
RNU6-1040P-201ENST00000383974 RNF4P78317 190 aa4.79□□□□□ -1.64
RNU6-1040P-201ENST00000383974 SNW1Q13573 536 aaKnown RBP4.79□□□□□ -1.64
RNU6-1040P-201ENST00000383974 OVOS1Q6IE37 1185 aa4.79□□□□□ -1.64
RNU6-1040P-201ENST00000383974 ERMP1Q7Z2K6 904 aa4.79□□□□□ -1.64
RNU6-1040P-201ENST00000383974 TMC3Q7Z5M5 1100 aa4.79□□□□□ -1.64
RNU6-1040P-201ENST00000383974 USHBP1Q8N6Y0 703 aa4.79□□□□□ -1.64
RNU6-1040P-201ENST00000383974 DAGLBQ8NCG7 672 aa4.79□□□□□ -1.64
RNU6-1040P-201ENST00000383974 ENOX1Q8TC92 643 aaKnown RBP4.79□□□□□ -1.64
RNU6-1040P-201ENST00000383974 TCTN2Q96GX1 697 aa4.79□□□□□ -1.64
RNU6-1040P-201ENST00000383974 MAP6Q96JE9 813 aa4.79□□□□□ -1.64
RNU6-1040P-201ENST00000383974 LRRC3Q9BY71 257 aa4.79□□□□□ -1.64
RNU6-1040P-201ENST00000383974 COPRSQ9NQ92 184 aa4.79□□□□□ -1.64
RNU6-1040P-201ENST00000383974 GMIPQ9P107 970 aa4.79□□□□□ -1.64
RNU6-1040P-201ENST00000383974 ZMYM5Q9UJ78 669 aa4.79□□□□□ -1.64
RNU6-1040P-201ENST00000383974 TCFL5Q9UL49 500 aa4.79□□□□□ -1.64
RNU6-1040P-201ENST00000383974 CNOT6Q9ULM6 557 aaKnown RBP4.79□□□□□ -1.64
RNU6-1040P-201ENST00000383974 PCDHB14Q9Y5E9 798 aa4.79□□□□□ -1.64
RNU6-1040P-201ENST00000383974 TMEM82A0PJX8 343 aa4.78□□□□□ -1.64
RNU6-1040P-201ENST00000383974 OR14I1A6ND48 311 aa4.78□□□□□ -1.64
RNU6-1040P-201ENST00000383974 FKTNO75072 461 aa4.78□□□□□ -1.64
RNU6-1040P-201ENST00000383974 HOXA5P20719 270 aa4.78□□□□□ -1.64
RNU6-1040P-201ENST00000383974 BUD31P41223 144 aaPredicted RBP4.78□□□□□ -1.64
RNU6-1040P-201ENST00000383974 PCBP3P57721 371 aaKnown RBP4.78□□□□□ -1.64
RNU6-1040P-201ENST00000383974 MLECQ14165 292 aa4.78□□□□□ -1.64
RNU6-1040P-201ENST00000383974 SSPNQ14714 243 aa4.78□□□□□ -1.64
RNU6-1040P-201ENST00000383974 CWF19L2Q2TBE0 894 aaKnown RBP4.78□□□□□ -1.64
RNU6-1040P-201ENST00000383974 BBS9Q3SYG4 887 aa4.78□□□□□ -1.64
RNU6-1040P-201ENST00000383974 LCE5AQ5TCM9 118 aa4.78□□□□□ -1.64
RNU6-1040P-201ENST00000383974 FBXL19Q6PCT2 694 aa4.78□□□□□ -1.64
RNU6-1040P-201ENST00000383974 CEP128Q6ZU80 1094 aa4.78□□□□□ -1.64
RNU6-1040P-201ENST00000383974 C20orf173Q96LM9 149 aa4.78□□□□□ -1.64
RNU6-1040P-201ENST00000383974 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.78□□□□□ -1.64
RNU6-1040P-201ENST00000383974 BRMS1Q9HCU9 246 aa4.78□□□□□ -1.64
RNU6-1040P-201ENST00000383974 KCNQ5Q9NR82 932 aa4.78□□□□□ -1.64
RNU6-1040P-201ENST00000383974 KCTD3Q9Y597 815 aa4.78□□□□□ -1.64
RNU6-1040P-201ENST00000383974 NRDCO43847 1150 aa4.77□□□□□ -1.65
RNU6-1040P-201ENST00000383974 PRAMEF1O95521 474 aa4.77□□□□□ -1.65
RNU6-1040P-201ENST00000383974 KIR2DL1P43626 348 aaPredicted RBP4.77□□□□□ -1.65
RNU6-1040P-201ENST00000383974 KIR2DL2P43627 348 aaPredicted RBP4.77□□□□□ -1.65
RNU6-1040P-201ENST00000383974 CRKP46108 304 aa4.77□□□□□ -1.65
RNU6-1040P-201ENST00000383974 NBPF9Q3BBW0 867 aa4.77□□□□□ -1.65
RNU6-1040P-201ENST00000383974 NBPF12Q5TAG4 269 aaPredicted RBP4.77□□□□□ -1.65
RNU6-1040P-201ENST00000383974 ZPBP2Q6X784 338 aa4.77□□□□□ -1.65
RNU6-1040P-201ENST00000383974 ZNF655Q8N720 491 aaPredicted RBP4.77□□□□□ -1.65
RNU6-1040P-201ENST00000383974 HHIPL1Q96JK4 782 aa4.77□□□□□ -1.65
RNU6-1040P-201ENST00000383974 PARD6AQ9NPB6 346 aa4.77□□□□□ -1.65
RNU6-1040P-201ENST00000383974 MBD1Q9UIS9 605 aaPredicted RBP4.77□□□□□ -1.65
RNU6-1040P-201ENST00000383974 SUPT16HQ9Y5B9 1047 aaKnown RBP4.77□□□□□ -1.65
RNU6-1040P-201ENST00000383974 ROBO2Q9HCK4 1378 aa4.77□□□□□ -1.65
RNU6-1040P-201ENST00000383974 SSU72P8A0A1W2PR75 194 aa4.76□□□□□ -1.65
RNU6-1040P-201ENST00000383974 RFXAPO00287 272 aa4.76□□□□□ -1.65
RNU6-1040P-201ENST00000383974 GREM1O60565 184 aa4.76□□□□□ -1.65
RNU6-1040P-201ENST00000383974 ATE1O95260 518 aa4.76□□□□□ -1.65
RNU6-1040P-201ENST00000383974 SYPP08247 313 aa4.76□□□□□ -1.65
RNU6-1040P-201ENST00000383974 BMP7P18075 431 aa4.76□□□□□ -1.65
RNU6-1040P-201ENST00000383974 PI3P19957 117 aa4.76□□□□□ -1.65
RNU6-1040P-201ENST00000383974 SDHBP21912 280 aa4.76□□□□□ -1.65
RNU6-1040P-201ENST00000383974 EIF4A3P38919 411 aaKnown RBP4.76□□□□□ -1.65
RNU6-1040P-201ENST00000383974 SRSF3P84103 164 aaKnown RBP4.76□□□□□ -1.65
RNU6-1040P-201ENST00000383974 SLC14A2Q15849 920 aa4.76□□□□□ -1.65
RNU6-1040P-201ENST00000383974 ZNF385BQ569K4 471 aa4.76□□□□□ -1.65
RNU6-1040P-201ENST00000383974 TCERG1LQ5VWI1 586 aa4.76□□□□□ -1.65
RNU6-1040P-201ENST00000383974 LINC00116Q8NCU8 138 aa4.76□□□□□ -1.65
RNU6-1040P-201ENST00000383974 ZNF512BQ96KM6 892 aaPredicted RBP4.76□□□□□ -1.65
RNU6-1040P-201ENST00000383974 PLCD4Q9BRC7 762 aa4.76□□□□□ -1.65
RNU6-1040P-201ENST00000383974 CRTAC1Q9NQ79 661 aa4.76□□□□□ -1.65
RNU6-1040P-201ENST00000383974 MINPP1Q9UNW1 487 aa4.76□□□□□ -1.65
RNU6-1040P-201ENST00000383974 A0A0G2JLL6 359 aaPredicted RBP4.75□□□□□ -1.65
RNU6-1040P-201ENST00000383974 HRKO00198 91 aa4.75□□□□□ -1.65
RNU6-1040P-201ENST00000383974 SIGLEC6O43699 453 aa4.75□□□□□ -1.65
RNU6-1040P-201ENST00000383974 CLEC3AO75596 197 aa4.75□□□□□ -1.65
RNU6-1040P-201ENST00000383974 ITGAEP38570 1179 aa4.75□□□□□ -1.65
RNU6-1040P-201ENST00000383974 EPHB3P54753 998 aa4.75□□□□□ -1.65
RNU6-1040P-201ENST00000383974 CDCP2Q5VXM1 449 aa4.75□□□□□ -1.65
RNU6-1040P-201ENST00000383974 NLRC3Q7RTR2 1065 aa4.75□□□□□ -1.65
RNU6-1040P-201ENST00000383974 ATG4CQ96DT6 458 aa4.75□□□□□ -1.65
RNU6-1040P-201ENST00000383974 FCRL2Q96LA5 508 aaPredicted RBP4.75□□□□□ -1.65
RNU6-1040P-201ENST00000383974 SIGLEC10Q96LC7 697 aa4.75□□□□□ -1.65
RNU6-1040P-201ENST00000383974 KCNC2Q96PR1 638 aa4.75□□□□□ -1.65
RNU6-1040P-201ENST00000383974 KRTAP9-3Q9BYQ3 159 aa4.75□□□□□ -1.65
RNU6-1040P-201ENST00000383974 PRDM14Q9GZV8 571 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms