RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 SMCR8Q8TEV9 937 aaPredicted RBP10.97□□□□□ -0.65
HMGN1-202ENST00000380747 PRO3102Q9H379 93 aa10.97□□□□□ -0.65
HMGN1-202ENST00000380747 ARHGEF10LQ9HCE6 1279 aa10.97□□□□□ -0.65
HMGN1-202ENST00000380747 PNMA3Q9UL41 463 aa10.97□□□□□ -0.65
HMGN1-202ENST00000380747 A0A1W2PRG0 241 aa10.96□□□□□ -0.65
HMGN1-202ENST00000380747 CHMLP26374 656 aa10.96□□□□□ -0.65
HMGN1-202ENST00000380747 HAND2P61296 217 aa10.96□□□□□ -0.65
HMGN1-202ENST00000380747 IRX3P78415 501 aaPredicted RBP10.96□□□□□ -0.65
HMGN1-202ENST00000380747 UBE2Q1Q7Z7E8 422 aa10.96□□□□□ -0.65
HMGN1-202ENST00000380747 NKX2-3Q8TAU0 364 aa10.96□□□□□ -0.65
HMGN1-202ENST00000380747 RUFY2Q8WXA3 655 aa10.96□□□□□ -0.65
HMGN1-202ENST00000380747 SHISA4Q96DD7 197 aa10.96□□□□□ -0.65
HMGN1-202ENST00000380747 KIAA1683Q9H0B3 1180 aa10.96□□□□□ -0.65
HMGN1-202ENST00000380747 SH2D4AQ9H788 454 aa10.96□□□□□ -0.65
HMGN1-202ENST00000380747 TOMM22Q9NS69 142 aa10.96□□□□□ -0.65
HMGN1-202ENST00000380747 PPP4R2Q9NY27 417 aa10.96□□□□□ -0.65
HMGN1-202ENST00000380747 RAD50Q92878 1312 aa10.95□□□□□ -0.66
HMGN1-202ENST00000380747 A0A1W2PPC1 479 aa10.95□□□□□ -0.66
HMGN1-202ENST00000380747 RAD21O60216 631 aa10.95□□□□□ -0.66
HMGN1-202ENST00000380747 TSPY3P0CV98 308 aa10.95□□□□□ -0.66
HMGN1-202ENST00000380747 TSPY8P0CW00 308 aa10.95□□□□□ -0.66
HMGN1-202ENST00000380747 EEF2P13639 858 aaKnown RBP10.95□□□□□ -0.66
HMGN1-202ENST00000380747 TFAP4Q01664 338 aa10.95□□□□□ -0.66
HMGN1-202ENST00000380747 FAM47AQ5JRC9 791 aa10.95□□□□□ -0.66
HMGN1-202ENST00000380747 ERICH6BQ5W0A0 696 aa10.95□□□□□ -0.66
HMGN1-202ENST00000380747 C17orf99Q6UX52 265 aa10.95□□□□□ -0.66
HMGN1-202ENST00000380747 SH3TC2Q8TF17 1288 aa10.95□□□□□ -0.66
HMGN1-202ENST00000380747 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.95□□□□□ -0.66
HMGN1-202ENST00000380747 ASCC2Q9H1I8 757 aaPredicted RBP10.95□□□□□ -0.66
HMGN1-202ENST00000380747 IL25Q9H293 177 aa10.95□□□□□ -0.66
HMGN1-202ENST00000380747 KANSL2Q9H9L4 492 aa10.95□□□□□ -0.66
HMGN1-202ENST00000380747 INCENPQ9NQS7 918 aa10.95□□□□□ -0.66
HMGN1-202ENST00000380747 RBM27Q9P2N5 1060 aaKnown RBP10.95□□□□□ -0.66
HMGN1-202ENST00000380747 ZMYM6O95789 1325 aa10.94□□□□□ -0.66
HMGN1-202ENST00000380747 ADGRA2Q96PE1 1338 aa10.94□□□□□ -0.66
HMGN1-202ENST00000380747 TSPY2A6NKD2 308 aa10.94□□□□□ -0.66
HMGN1-202ENST00000380747 ZNF213O14771 459 aa10.94□□□□□ -0.66
HMGN1-202ENST00000380747 RANBP6O60518 1105 aaKnown RBP10.94□□□□□ -0.66
HMGN1-202ENST00000380747 GJB1P08034 283 aa10.94□□□□□ -0.66
HMGN1-202ENST00000380747 CAPN2P17655 700 aa10.94□□□□□ -0.66
HMGN1-202ENST00000380747 VCAM1P19320 739 aa10.94□□□□□ -0.66
HMGN1-202ENST00000380747 HOXA7P31268 230 aaPredicted RBP10.94□□□□□ -0.66
HMGN1-202ENST00000380747 RRP12Q5JTH9 1297 aaKnown RBP10.94□□□□□ -0.66
HMGN1-202ENST00000380747 SIAH1Q8IUQ4 282 aa10.94□□□□□ -0.66
HMGN1-202ENST00000380747 C12orf42Q96LP6 360 aa10.94□□□□□ -0.66
HMGN1-202ENST00000380747 P2RX7Q99572 595 aaKnown RBP10.94□□□□□ -0.66
HMGN1-202ENST00000380747 HTATIP2Q9BUP3 242 aa10.94□□□□□ -0.66
HMGN1-202ENST00000380747 ARHGAP39Q9C0H5 1083 aa10.94□□□□□ -0.66
HMGN1-202ENST00000380747 SRRDQ9UH36 339 aa10.94□□□□□ -0.66
HMGN1-202ENST00000380747 ANAPC4Q9UJX5 808 aa10.94□□□□□ -0.66
HMGN1-202ENST00000380747 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.94□□□□□ -0.66
HMGN1-202ENST00000380747 TMX2Q9Y320 296 aa10.94□□□□□ -0.66
HMGN1-202ENST00000380747 LOC285556D6RIA3 1793 aa10.94□□□□□ -0.66
HMGN1-202ENST00000380747 UNC80Q8N2C7 3258 aa10.93□□□□□ -0.66
HMGN1-202ENST00000380747 GRXCR2A6NFK2 248 aa10.93□□□□□ -0.66
HMGN1-202ENST00000380747 USP17L15C9J2P7 530 aa10.93□□□□□ -0.66
HMGN1-202ENST00000380747 USP17L13C9JLJ4 530 aa10.93□□□□□ -0.66
HMGN1-202ENST00000380747 USP17L11C9JVI0 530 aa10.93□□□□□ -0.66
HMGN1-202ENST00000380747 USP17L18D6R9N7 530 aa10.93□□□□□ -0.66
HMGN1-202ENST00000380747 USP17L22D6RA61 530 aa10.93□□□□□ -0.66
HMGN1-202ENST00000380747 USP17L17D6RBQ6 530 aa10.93□□□□□ -0.66
HMGN1-202ENST00000380747 USP17L19D6RCP7 530 aa10.93□□□□□ -0.66
HMGN1-202ENST00000380747 USP17L20D6RJB6 530 aa10.93□□□□□ -0.66
HMGN1-202ENST00000380747 FMNL1O95466 1100 aaPredicted RBP10.93□□□□□ -0.66
HMGN1-202ENST00000380747 BCRP11274 1271 aa10.93□□□□□ -0.66
HMGN1-202ENST00000380747 HOXD10P28358 340 aa10.93□□□□□ -0.66
HMGN1-202ENST00000380747 GJA8P48165 433 aa10.93□□□□□ -0.66
HMGN1-202ENST00000380747 GCLCP48506 637 aaPredicted RBP10.93□□□□□ -0.66
HMGN1-202ENST00000380747 USP17L24Q0WX57 530 aa10.93□□□□□ -0.66
HMGN1-202ENST00000380747 BMP2KLQ5H9B9 411 aa10.93□□□□□ -0.66
HMGN1-202ENST00000380747 SPICE1Q8N0Z3 855 aa10.93□□□□□ -0.66
HMGN1-202ENST00000380747 ANKRD13CQ8N6S4 541 aa10.93□□□□□ -0.66
HMGN1-202ENST00000380747 NEDD1Q8NHV4 660 aa10.93□□□□□ -0.66
HMGN1-202ENST00000380747 DSCC1Q9BVC3 393 aa10.93□□□□□ -0.66
HMGN1-202ENST00000380747 TANGO6Q9C0B7 1094 aa10.93□□□□□ -0.66
HMGN1-202ENST00000380747 RPAP3Q9H6T3 665 aaPredicted RBP10.93□□□□□ -0.66
HMGN1-202ENST00000380747 CLIP2Q9UDT6 1046 aa10.93□□□□□ -0.66
HMGN1-202ENST00000380747 CTNNA3Q9UI47 895 aa10.93□□□□□ -0.66
HMGN1-202ENST00000380747 TACC3Q9Y6A5 838 aa10.93□□□□□ -0.66
HMGN1-202ENST00000380747 PTPRFP10586 1907 aa10.93□□□□□ -0.66
HMGN1-202ENST00000380747 MYH8P13535 1937 aa10.92□□□□□ -0.66
HMGN1-202ENST00000380747 IGKV6D-41A0A0C4DH26 115 aa10.92□□□□□ -0.66
HMGN1-202ENST00000380747 ORC4O43929 436 aa10.92□□□□□ -0.66
HMGN1-202ENST00000380747 PSMC4P43686 418 aa10.92□□□□□ -0.66
HMGN1-202ENST00000380747 HERVK_113P62684 666 aa10.92□□□□□ -0.66
HMGN1-202ENST00000380747 MTFR1Q15390 333 aa10.92□□□□□ -0.66
HMGN1-202ENST00000380747 KIAA1755Q5JYT7 1200 aa10.92□□□□□ -0.66
HMGN1-202ENST00000380747 AKNAD1Q5T1N1 836 aa10.92□□□□□ -0.66
HMGN1-202ENST00000380747 CATSPERGQ6ZRH7 1159 aa10.92□□□□□ -0.66
HMGN1-202ENST00000380747 MFSD6Q6ZSS7 791 aa10.92□□□□□ -0.66
HMGN1-202ENST00000380747 TBC1D10CQ8IV04 446 aa10.92□□□□□ -0.66
HMGN1-202ENST00000380747 LPAR1Q92633 364 aa10.92□□□□□ -0.66
HMGN1-202ENST00000380747 DPF3Q92784 378 aa10.92□□□□□ -0.66
HMGN1-202ENST00000380747 CEP95Q96GE4 821 aa10.92□□□□□ -0.66
HMGN1-202ENST00000380747 TRIM47Q96LD4 638 aa10.92□□□□□ -0.66
HMGN1-202ENST00000380747 RNF41Q9H4P4 317 aaPredicted RBP10.92□□□□□ -0.66
HMGN1-202ENST00000380747 VCPKMTQ9H867 229 aa10.92□□□□□ -0.66
HMGN1-202ENST00000380747 GOPCQ9HD26 462 aa10.92□□□□□ -0.66
HMGN1-202ENST00000380747 MTMR4Q9NYA4 1195 aa10.92□□□□□ -0.66
HMGN1-202ENST00000380747 NYAP2Q9P242 653 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms