RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 CTAGE9A4FU28 777 aa18.76■□□□□ 0.59
PCDHA1-201ENST00000378133 ATP6V1AP38606 617 aa18.76■□□□□ 0.59
PCDHA1-201ENST00000378133 FUT2Q10981 343 aa18.76■□□□□ 0.59
PCDHA1-201ENST00000378133 ZNF174Q15697 407 aa18.76■□□□□ 0.59
PCDHA1-201ENST00000378133 IFIT1BQ5T764 474 aaKnown RBP18.76■□□□□ 0.59
PCDHA1-201ENST00000378133 C8orf37Q96NL8 207 aa18.76■□□□□ 0.59
PCDHA1-201ENST00000378133 NAA15Q9BXJ9 866 aaKnown RBP18.76■□□□□ 0.59
PCDHA1-201ENST00000378133 KCNG1Q9UIX4 513 aa18.76■□□□□ 0.59
PCDHA1-201ENST00000378133 ANAPC4Q9UJX5 808 aa18.76■□□□□ 0.59
PCDHA1-201ENST00000378133 SPATA31A5Q5VU36 1347 aa18.76■□□□□ 0.59
PCDHA1-201ENST00000378133 SPATA31A7Q8IWB4 1347 aa18.76■□□□□ 0.59
PCDHA1-201ENST00000378133 RTL9Q8NET4 1388 aa18.76■□□□□ 0.59
PCDHA1-201ENST00000378133 PHACTR2O75167 634 aa18.76■□□□□ 0.59
PCDHA1-201ENST00000378133 CAMTA2O94983 1202 aa18.76■□□□□ 0.59
PCDHA1-201ENST00000378133 MYCNP04198 464 aaPredicted RBP18.76■□□□□ 0.59
PCDHA1-201ENST00000378133 RBL2Q08999 1139 aa18.76■□□□□ 0.59
PCDHA1-201ENST00000378133 CASP8Q14790 479 aa18.76■□□□□ 0.59
PCDHA1-201ENST00000378133 PPP2R5BQ15173 497 aa18.76■□□□□ 0.59
PCDHA1-201ENST00000378133 PARP10Q53GL7 1025 aa18.75■□□□□ 0.59
PCDHA1-201ENST00000378133 SPATA1Q5VX52 437 aa18.75■□□□□ 0.59
PCDHA1-201ENST00000378133 APTXQ7Z2E3 356 aaKnown RBP18.75■□□□□ 0.59
PCDHA1-201ENST00000378133 CATIPQ7Z7H3 387 aa18.75■□□□□ 0.59
PCDHA1-201ENST00000378133 STAMQ92783 540 aa18.75■□□□□ 0.59
PCDHA1-201ENST00000378133 RIOK1Q9BRS2 568 aaKnown RBP18.75■□□□□ 0.59
PCDHA1-201ENST00000378133 PRPF3O43395 683 aaKnown RBP18.75■□□□□ 0.59
PCDHA1-201ENST00000378133 NTSR2O95665 410 aa18.75■□□□□ 0.59
PCDHA1-201ENST00000378133 MAGEA9P43362 315 aa18.75■□□□□ 0.59
PCDHA1-201ENST00000378133 VSNL1P62760 191 aa18.75■□□□□ 0.59
PCDHA1-201ENST00000378133 IGSF22Q8N9C0 903 aa18.75■□□□□ 0.59
PCDHA1-201ENST00000378133 SH3RF1Q7Z6J0 888 aa18.74■□□□□ 0.59
PCDHA1-201ENST00000378133 FAM71BQ8TC56 605 aa18.74■□□□□ 0.59
PCDHA1-201ENST00000378133 ACSBG1Q96GR2 724 aa18.74■□□□□ 0.59
PCDHA1-201ENST00000378133 GBP3Q9H0R5 595 aa18.74■□□□□ 0.59
PCDHA1-201ENST00000378133 MKRN1Q9UHC7 482 aaKnown RBP18.74■□□□□ 0.59
PCDHA1-201ENST00000378133 TFRCP02786 760 aaKnown RBP18.74■□□□□ 0.59
PCDHA1-201ENST00000378133 HSPA1LP34931 641 aa18.74■□□□□ 0.59
PCDHA1-201ENST00000378133 CUL4BQ13620 913 aa18.74■□□□□ 0.59
PCDHA1-201ENST00000378133 CTAGE15A4D2H0 777 aa18.73■□□□□ 0.59
PCDHA1-201ENST00000378133 EIF3CLB5ME19 914 aaKnown RBP18.73■□□□□ 0.59
PCDHA1-201ENST00000378133 COBLO75128 1261 aa18.73■□□□□ 0.59
PCDHA1-201ENST00000378133 CTAGE8P0CG41 777 aa18.73■□□□□ 0.59
PCDHA1-201ENST00000378133 TROAPQ12815 778 aa18.73■□□□□ 0.59
PCDHA1-201ENST00000378133 RASGRP2Q7LDG7 609 aa18.73■□□□□ 0.59
PCDHA1-201ENST00000378133 CTAGE6Q86UF2 777 aa18.73■□□□□ 0.59
PCDHA1-201ENST00000378133 CTAGE4Q8IX94 777 aa18.73■□□□□ 0.59
PCDHA1-201ENST00000378133 SLC35F6Q8N357 371 aa18.73■□□□□ 0.59
PCDHA1-201ENST00000378133 EIF3CQ99613 913 aaKnown RBP18.73■□□□□ 0.59
PCDHA1-201ENST00000378133 BCL9LQ86UU0 1499 aa18.73■□□□□ 0.59
PCDHA1-201ENST00000378133 SYNRGQ9UMZ2 1314 aa18.73■□□□□ 0.59
PCDHA1-201ENST00000378133 LOC102724159A0A0B4J2E5 919 aa18.73■□□□□ 0.59
PCDHA1-201ENST00000378133 DPYDQ12882 1025 aa18.73■□□□□ 0.59
PCDHA1-201ENST00000378133 PWP2Q15269 919 aaKnown RBP18.73■□□□□ 0.59
PCDHA1-201ENST00000378133 IQCA1Q86XH1 822 aa18.73■□□□□ 0.59
PCDHA1-201ENST00000378133 THRAP3Q9Y2W1 955 aaKnown RBP18.73■□□□□ 0.59
PCDHA1-201ENST00000378133 EVX2Q03828 476 aa18.73■□□□□ 0.59
PCDHA1-201ENST00000378133 TTC31Q49AM3 519 aaPredicted RBP18.73■□□□□ 0.59
PCDHA1-201ENST00000378133 FERMT2Q96AC1 680 aa18.73■□□□□ 0.59
PCDHA1-201ENST00000378133 GEMIN8Q9NWZ8 242 aaKnown RBP18.73■□□□□ 0.59
PCDHA1-201ENST00000378133 BAZ2AQ9UIF9 1905 aaKnown RBP18.72■□□□□ 0.59
PCDHA1-201ENST00000378133 PPP1R3GB7ZBB8 358 aa18.72■□□□□ 0.59
PCDHA1-201ENST00000378133 GTF2A1P52655 376 aaPredicted RBP18.72■□□□□ 0.59
PCDHA1-201ENST00000378133 PTGDRQ13258 359 aa18.72■□□□□ 0.59
PCDHA1-201ENST00000378133 LRRC31Q6UY01 552 aa18.72■□□□□ 0.59
PCDHA1-201ENST00000378133 NGLY1Q96IV0 654 aa18.72■□□□□ 0.59
PCDHA1-201ENST00000378133 GSDMAQ96QA5 445 aa18.72■□□□□ 0.59
PCDHA1-201ENST00000378133 ACBD3Q9H3P7 528 aa18.72■□□□□ 0.59
PCDHA1-201ENST00000378133 GNL3LQ9NVN8 582 aaKnown RBP18.72■□□□□ 0.59
PCDHA1-201ENST00000378133 ADD3Q9UEY8 706 aaKnown RBP18.72■□□□□ 0.59
PCDHA1-201ENST00000378133 ZNF804BA4D1E1 1349 aa18.72■□□□□ 0.59
PCDHA1-201ENST00000378133 NPY5RQ15761 445 aa18.72■□□□□ 0.59
PCDHA1-201ENST00000378133 TTC38Q5R3I4 469 aa18.72■□□□□ 0.59
PCDHA1-201ENST00000378133 ICE2Q659A1 982 aa18.72■□□□□ 0.59
PCDHA1-201ENST00000378133 CDC5LQ99459 802 aaKnown RBP18.72■□□□□ 0.59
PCDHA1-201ENST00000378133 YY1AP1Q9H869 796 aa18.72■□□□□ 0.59
PCDHA1-201ENST00000378133 USP17L12C9JPN9 530 aa18.71■□□□□ 0.59
PCDHA1-201ENST00000378133 USP17L21D6R901 530 aa18.71■□□□□ 0.59
PCDHA1-201ENST00000378133 TUBBP07437 444 aa18.71■□□□□ 0.59
PCDHA1-201ENST00000378133 ITPK1Q13572 414 aa18.71■□□□□ 0.59
PCDHA1-201ENST00000378133 ZNF384Q8TF68 577 aa18.71■□□□□ 0.59
PCDHA1-201ENST00000378133 NAPGQ99747 312 aaPredicted RBP18.71■□□□□ 0.59
PCDHA1-201ENST00000378133 BLZF1Q9H2G9 400 aa18.71■□□□□ 0.59
PCDHA1-201ENST00000378133 BRMS1Q9HCU9 246 aa18.71■□□□□ 0.59
PCDHA1-201ENST00000378133 RBM28Q9NW13 759 aaKnown RBP18.71■□□□□ 0.59
PCDHA1-201ENST00000378133 COL4A1P02462 1669 aa18.71■□□□□ 0.59
PCDHA1-201ENST00000378133 LOC102724428A0A0B4J2F2 783 aa18.71■□□□□ 0.59
PCDHA1-201ENST00000378133 NMT2O60551 498 aa18.71■□□□□ 0.59
PCDHA1-201ENST00000378133 SIK1P57059 783 aa18.71■□□□□ 0.59
PCDHA1-201ENST00000378133 WHAMMP3Q1A5X7 153 aa18.71■□□□□ 0.59
PCDHA1-201ENST00000378133 CT47A1Q5JQC4 288 aaPredicted RBP18.71■□□□□ 0.59
PCDHA1-201ENST00000378133 CDKAL1Q5VV42 579 aa18.71■□□□□ 0.59
PCDHA1-201ENST00000378133 PACS2Q86VP3 889 aa18.71■□□□□ 0.59
PCDHA1-201ENST00000378133 FAM204AQ9H8W3 233 aa18.71■□□□□ 0.59
PCDHA1-201ENST00000378133 MED4Q9NPJ6 270 aa18.71■□□□□ 0.59
PCDHA1-201ENST00000378133 TTF2Q9UNY4 1162 aaKnown RBP18.71■□□□□ 0.59
PCDHA1-201ENST00000378133 SPATA31A6Q5VVP1 1343 aa18.7■□□□□ 0.58
PCDHA1-201ENST00000378133 LRRIQ3A6PVS8 624 aaPredicted RBP18.7■□□□□ 0.58
PCDHA1-201ENST00000378133 CASP14P31944 242 aa18.7■□□□□ 0.58
PCDHA1-201ENST00000378133 SRBD1Q8N5C6 995 aaKnown RBP18.7■□□□□ 0.58
PCDHA1-201ENST00000378133 TNFRSF25Q93038 417 aa18.7■□□□□ 0.58
PCDHA1-201ENST00000378133 MFAP3LO75121 409 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms