RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 KIAA0825Q8IV33 1275 aa13.85□□□□□ -0.19
HMGCL-202ENST00000374487 AMOTL1Q8IY63 956 aa13.85□□□□□ -0.19
HMGCL-202ENST00000374487 BRMS1Q9HCU9 246 aa13.85□□□□□ -0.19
HMGCL-202ENST00000374487 PCDHB6Q9Y5E3 794 aa13.85□□□□□ -0.19
HMGCL-202ENST00000374487 IL1R1P14778 569 aa13.85□□□□□ -0.19
HMGCL-202ENST00000374487 KRT2P35908 639 aa13.85□□□□□ -0.19
HMGCL-202ENST00000374487 PKN1Q16512 942 aa13.85□□□□□ -0.19
HMGCL-202ENST00000374487 LONRF3Q496Y0 759 aa13.85□□□□□ -0.19
HMGCL-202ENST00000374487 SPECC1Q5M775 1068 aa13.85□□□□□ -0.19
HMGCL-202ENST00000374487 RBM46Q8TBY0 533 aaKnown RBP13.85□□□□□ -0.19
HMGCL-202ENST00000374487 IGSF3O75054 1194 aa13.84□□□□□ -0.19
HMGCL-202ENST00000374487 USP17L8P0C7I0 530 aa13.84□□□□□ -0.19
HMGCL-202ENST00000374487 PTPREP23469 700 aa13.84□□□□□ -0.19
HMGCL-202ENST00000374487 FUT2Q10981 343 aa13.84□□□□□ -0.19
HMGCL-202ENST00000374487 LRMPQ12912 555 aa13.84□□□□□ -0.19
HMGCL-202ENST00000374487 PNOCQ13519 176 aa13.84□□□□□ -0.19
HMGCL-202ENST00000374487 KRBA2Q6ZNG9 492 aa13.84□□□□□ -0.19
HMGCL-202ENST00000374487 ZNF646O15015 1829 aaPredicted RBP13.84□□□□□ -0.19
HMGCL-202ENST00000374487 BAZ2AQ9UIF9 1905 aaKnown RBP13.84□□□□□ -0.19
HMGCL-202ENST00000374487 UQCRHLA0A096LP55 91 aa13.83□□□□□ -0.19
HMGCL-202ENST00000374487 LDHCP07864 332 aa13.83□□□□□ -0.19
HMGCL-202ENST00000374487 UQCRHP07919 91 aa13.83□□□□□ -0.19
HMGCL-202ENST00000374487 CCDC144BQ3MJ40 725 aa13.83□□□□□ -0.19
HMGCL-202ENST00000374487 STRIP1Q5VSL9 837 aa13.83□□□□□ -0.19
HMGCL-202ENST00000374487 TMTC3Q6ZXV5 915 aa13.83□□□□□ -0.19
HMGCL-202ENST00000374487 PHF20Q9BVI0 1012 aa13.83□□□□□ -0.19
HMGCL-202ENST00000374487 ADARB2Q9NS39 739 aaKnown RBP13.83□□□□□ -0.19
HMGCL-202ENST00000374487 TUBE1Q9UJT0 475 aa13.83□□□□□ -0.19
HMGCL-202ENST00000374487 FBXO2Q9UK22 296 aaPredicted RBP13.83□□□□□ -0.19
HMGCL-202ENST00000374487 SCN4AP35499 1836 aa13.83□□□□□ -0.2
HMGCL-202ENST00000374487 TRIM75PA6NK02 468 aa13.83□□□□□ -0.2
HMGCL-202ENST00000374487 TRAF5O00463 557 aa13.83□□□□□ -0.2
HMGCL-202ENST00000374487 DIXDC1Q155Q3 683 aa13.83□□□□□ -0.2
HMGCL-202ENST00000374487 CHADLQ6NUI6 762 aa13.83□□□□□ -0.2
HMGCL-202ENST00000374487 FILIP1Q7Z7B0 1213 aa13.83□□□□□ -0.2
HMGCL-202ENST00000374487 SH3RF3Q8TEJ3 882 aaPredicted RBP13.83□□□□□ -0.2
HMGCL-202ENST00000374487 DPF2Q92785 391 aa13.83□□□□□ -0.2
HMGCL-202ENST00000374487 MKNK2Q9HBH9 465 aa13.83□□□□□ -0.2
HMGCL-202ENST00000374487 SRPRBQ9Y5M8 271 aaKnown RBP13.83□□□□□ -0.2
HMGCL-202ENST00000374487 ECM29Q5VYK3 1845 aa13.83□□□□□ -0.2
HMGCL-202ENST00000374487 H7C1D1 291 aa13.82□□□□□ -0.2
HMGCL-202ENST00000374487 KIF5BP33176 963 aa13.82□□□□□ -0.2
HMGCL-202ENST00000374487 TFAP4Q01664 338 aa13.82□□□□□ -0.2
HMGCL-202ENST00000374487 C12orf60Q5U649 245 aa13.82□□□□□ -0.2
HMGCL-202ENST00000374487 ZNF579Q8NAF0 562 aaKnown RBP13.82□□□□□ -0.2
HMGCL-202ENST00000374487 SMC1BQ8NDV3 1235 aa13.82□□□□□ -0.2
HMGCL-202ENST00000374487 CACTINQ8WUQ7 758 aaKnown RBP13.82□□□□□ -0.2
HMGCL-202ENST00000374487 KAT14Q9H8E8 782 aa13.82□□□□□ -0.2
HMGCL-202ENST00000374487 POLR2DO15514 142 aaKnown RBP13.82□□□□□ -0.2
HMGCL-202ENST00000374487 NEMFO60524 1076 aa13.82□□□□□ -0.2
HMGCL-202ENST00000374487 SMC2O95347 1197 aa13.82□□□□□ -0.2
HMGCL-202ENST00000374487 GRIN1Q05586 938 aa13.82□□□□□ -0.2
HMGCL-202ENST00000374487 METTL16Q86W50 562 aaKnown RBP13.82□□□□□ -0.2
HMGCL-202ENST00000374487 LDHDQ86WU2 507 aa13.82□□□□□ -0.2
HMGCL-202ENST00000374487 LRRC8AQ8IWT6 810 aa13.82□□□□□ -0.2
HMGCL-202ENST00000374487 SRBD1Q8N5C6 995 aaKnown RBP13.82□□□□□ -0.2
HMGCL-202ENST00000374487 IKBKBO14920 756 aa13.81□□□□□ -0.2
HMGCL-202ENST00000374487 ITGBL1O95965 494 aaPredicted RBP13.81□□□□□ -0.2
HMGCL-202ENST00000374487 NBPF9Q3BBW0 867 aa13.81□□□□□ -0.2
HMGCL-202ENST00000374487 AGBL3Q8NEM8 1001 aa13.81□□□□□ -0.2
HMGCL-202ENST00000374487 TGFBRAP1Q8WUH2 860 aa13.81□□□□□ -0.2
HMGCL-202ENST00000374487 PRIMPOLQ96LW4 560 aa13.81□□□□□ -0.2
HMGCL-202ENST00000374487 GLIS2Q9BZE0 524 aaPredicted RBP13.81□□□□□ -0.2
HMGCL-202ENST00000374487 PCDHA5Q9Y5H7 936 aa13.81□□□□□ -0.2
HMGCL-202ENST00000374487 MYH2Q9UKX2 1941 aa13.81□□□□□ -0.2
HMGCL-202ENST00000374487 MYH13Q9UKX3 1938 aa13.81□□□□□ -0.2
HMGCL-202ENST00000374487 ADAMTSL1Q8N6G6 1762 aa13.81□□□□□ -0.2
HMGCL-202ENST00000374487 RPS12P25398 132 aaKnown RBP13.81□□□□□ -0.2
HMGCL-202ENST00000374487 NT5C2P49902 561 aa13.81□□□□□ -0.2
HMGCL-202ENST00000374487 NLRP5P59047 1200 aa13.81□□□□□ -0.2
HMGCL-202ENST00000374487 KIF4BQ2VIQ3 1234 aa13.81□□□□□ -0.2
HMGCL-202ENST00000374487 MFSD14BQ5SR56 506 aa13.81□□□□□ -0.2
HMGCL-202ENST00000374487 USP50Q70EL3 339 aaPredicted RBP13.81□□□□□ -0.2
HMGCL-202ENST00000374487 PNMA8AQ86V59 439 aaPredicted RBP13.81□□□□□ -0.2
HMGCL-202ENST00000374487 ELOA2Q8IYF1 753 aaPredicted RBP13.81□□□□□ -0.2
HMGCL-202ENST00000374487 ZNF444Q8N0Y2 327 aaPredicted RBP13.81□□□□□ -0.2
HMGCL-202ENST00000374487 SHISA4Q96DD7 197 aa13.81□□□□□ -0.2
HMGCL-202ENST00000374487 DYNLL2Q96FJ2 89 aa13.81□□□□□ -0.2
HMGCL-202ENST00000374487 IFNKQ9P0W0 207 aa13.81□□□□□ -0.2
HMGCL-202ENST00000374487 FAM205CA6NFA0 338 aa13.8□□□□□ -0.2
HMGCL-202ENST00000374487 BMP15O95972 392 aa13.8□□□□□ -0.2
HMGCL-202ENST00000374487 SCG2P13521 617 aa13.8□□□□□ -0.2
HMGCL-202ENST00000374487 ZNF280AP59817 542 aaPredicted RBP13.8□□□□□ -0.2
HMGCL-202ENST00000374487 PPP4CP60510 307 aa13.8□□□□□ -0.2
HMGCL-202ENST00000374487 KANK3Q6NY19 840 aa13.8□□□□□ -0.2
HMGCL-202ENST00000374487 DGKHQ86XP1 1220 aa13.8□□□□□ -0.2
HMGCL-202ENST00000374487 PDILTQ8N807 584 aa13.8□□□□□ -0.2
HMGCL-202ENST00000374487 CCDC34Q96HJ3 373 aa13.8□□□□□ -0.2
HMGCL-202ENST00000374487 CSRNP2Q9H175 543 aa13.8□□□□□ -0.2
HMGCL-202ENST00000374487 MYOZ2Q9NPC6 264 aa13.8□□□□□ -0.2
HMGCL-202ENST00000374487 MKRN1Q9UHC7 482 aaKnown RBP13.8□□□□□ -0.2
HMGCL-202ENST00000374487 CNTNAP5Q8WYK1 1306 aa13.8□□□□□ -0.2
HMGCL-202ENST00000374487 TSPY3P0CV98 308 aa13.79□□□□□ -0.2
HMGCL-202ENST00000374487 TSPY8P0CW00 308 aa13.79□□□□□ -0.2
HMGCL-202ENST00000374487 GSDMDP57764 484 aa13.79□□□□□ -0.2
HMGCL-202ENST00000374487 MYL5Q02045 173 aa13.79□□□□□ -0.2
HMGCL-202ENST00000374487 NCAPHQ15003 741 aa13.79□□□□□ -0.2
HMGCL-202ENST00000374487 POSTNQ15063 836 aa13.79□□□□□ -0.2
HMGCL-202ENST00000374487 CCDC178Q5BJE1 867 aa13.79□□□□□ -0.2
HMGCL-202ENST00000374487 RCSD1Q6JBY9 416 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms