RNA–Protein interactions for RNA: ENST00000373556.7

HDAC8-202, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-202ENST00000373556 GPATCH3Q96I76 525 aa19.35■□□□□ 0.69
HDAC8-202ENST00000373556 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.35■□□□□ 0.69
HDAC8-202ENST00000373556 MINDY4BA8MYZ0 360 aa19.34■□□□□ 0.69
HDAC8-202ENST00000373556 ATN1P54259 1190 aaPredicted RBP19.34■□□□□ 0.69
HDAC8-202ENST00000373556 FAM83BQ5T0W9 1011 aa19.34■□□□□ 0.69
HDAC8-202ENST00000373556 GJC2Q5T442 439 aaPredicted RBP19.34■□□□□ 0.69
HDAC8-202ENST00000373556 UBE2OQ9C0C9 1292 aaKnown RBP19.34■□□□□ 0.69
HDAC8-202ENST00000373556 GOPCQ9HD26 462 aa19.34■□□□□ 0.69
HDAC8-202ENST00000373556 RNF113AO15541 343 aaKnown RBP19.33■□□□□ 0.68
HDAC8-202ENST00000373556 FCER1AP12319 257 aa19.33■□□□□ 0.68
HDAC8-202ENST00000373556 RASA1P20936 1047 aa19.33■□□□□ 0.68
HDAC8-202ENST00000373556 SBK1Q52WX2 424 aa19.33■□□□□ 0.68
HDAC8-202ENST00000373556 PRAMEF19Q5SWL8 479 aa19.33■□□□□ 0.68
HDAC8-202ENST00000373556 ABRAQ8N0Z2 381 aa19.33■□□□□ 0.68
HDAC8-202ENST00000373556 APPBP2Q92624 585 aa19.33■□□□□ 0.68
HDAC8-202ENST00000373556 EPB41L4AQ9HCS5 686 aaPredicted RBP19.33■□□□□ 0.68
HDAC8-202ENST00000373556 SLC5A4Q9NY91 659 aa19.33■□□□□ 0.68
HDAC8-202ENST00000373556 PLXNA1Q9UIW2 1896 aa19.33■□□□□ 0.68
HDAC8-202ENST00000373556 M0R2C6 588 aa19.32■□□□□ 0.68
HDAC8-202ENST00000373556 DNM1LO00429 736 aa19.32■□□□□ 0.68
HDAC8-202ENST00000373556 MYCNP04198 464 aaPredicted RBP19.32■□□□□ 0.68
HDAC8-202ENST00000373556 MDM2Q00987 491 aaPredicted RBP19.32■□□□□ 0.68
HDAC8-202ENST00000373556 MAML3Q96JK9 1138 aa19.32■□□□□ 0.68
HDAC8-202ENST00000373556 NUP88Q99567 741 aaPredicted RBP19.32■□□□□ 0.68
HDAC8-202ENST00000373556 MKNK2Q9HBH9 465 aa19.32■□□□□ 0.68
HDAC8-202ENST00000373556 PPP1R9AQ9ULJ8 1098 aa19.32■□□□□ 0.68
HDAC8-202ENST00000373556 ADAMTS5Q9UNA0 930 aa19.32■□□□□ 0.68
HDAC8-202ENST00000373556 ROBO3Q96MS0 1386 aa19.32■□□□□ 0.68
HDAC8-202ENST00000373556 MYH4Q9Y623 1939 aa19.31■□□□□ 0.68
HDAC8-202ENST00000373556 VWA5AO00534 786 aa19.31■□□□□ 0.68
HDAC8-202ENST00000373556 GPAA1O43292 621 aa19.31■□□□□ 0.68
HDAC8-202ENST00000373556 SLC25A27O95847 323 aa19.31■□□□□ 0.68
HDAC8-202ENST00000373556 PGK2P07205 417 aa19.31■□□□□ 0.68
HDAC8-202ENST00000373556 GIMAP6Q6P9H5 292 aa19.31■□□□□ 0.68
HDAC8-202ENST00000373556 TDHQ8IZJ6 230 aa19.31■□□□□ 0.68
HDAC8-202ENST00000373556 MMP19Q99542 508 aa19.31■□□□□ 0.68
HDAC8-202ENST00000373556 SEPT4O43236 478 aa19.3■□□□□ 0.68
HDAC8-202ENST00000373556 PRDM1O75626 825 aa19.3■□□□□ 0.68
HDAC8-202ENST00000373556 APPP05067 770 aa19.3■□□□□ 0.68
HDAC8-202ENST00000373556 STAT3P40763 770 aa19.3■□□□□ 0.68
HDAC8-202ENST00000373556 TDO2P48775 406 aa19.3■□□□□ 0.68
HDAC8-202ENST00000373556 RIOX2Q8IUF8 465 aa19.3■□□□□ 0.68
HDAC8-202ENST00000373556 REPS2Q8NFH8 660 aa19.3■□□□□ 0.68
HDAC8-202ENST00000373556 OTUD7AQ8TE49 926 aaPredicted RBP19.3■□□□□ 0.68
HDAC8-202ENST00000373556 ZNF214Q9UL59 606 aaPredicted RBP19.3■□□□□ 0.68
HDAC8-202ENST00000373556 PCDHB15Q9Y5E8 787 aa19.3■□□□□ 0.68
HDAC8-202ENST00000373556 ZFYP08048 801 aaPredicted RBP19.29■□□□□ 0.68
HDAC8-202ENST00000373556 RTP1P59025 263 aa19.29■□□□□ 0.68
HDAC8-202ENST00000373556 ARRDC4Q8NCT1 418 aa19.29■□□□□ 0.68
HDAC8-202ENST00000373556 NYAP2Q9P242 653 aa19.29■□□□□ 0.68
HDAC8-202ENST00000373556 SMCHD1A6NHR9 2005 aa19.29■□□□□ 0.68
HDAC8-202ENST00000373556 KBTBD13C9JR72 458 aa19.28■□□□□ 0.68
HDAC8-202ENST00000373556 F5H6K3 240 aa19.28■□□□□ 0.68
HDAC8-202ENST00000373556 GNAT2P19087 354 aa19.28■□□□□ 0.68
HDAC8-202ENST00000373556 KLRC3Q07444 240 aa19.28■□□□□ 0.68
HDAC8-202ENST00000373556 KCTD2Q14681 263 aa19.28■□□□□ 0.68
HDAC8-202ENST00000373556 LRIT3Q3SXY7 679 aa19.28■□□□□ 0.68
HDAC8-202ENST00000373556 FAM47AQ5JRC9 791 aa19.28■□□□□ 0.68
HDAC8-202ENST00000373556 SEC62Q99442 399 aaKnown RBP19.28■□□□□ 0.68
HDAC8-202ENST00000373556 SLF1Q9BQI6 1058 aa19.28■□□□□ 0.68
HDAC8-202ENST00000373556 CLIP2Q9UDT6 1046 aa19.28■□□□□ 0.68
HDAC8-202ENST00000373556 ATP11BQ9Y2G3 1177 aa19.28■□□□□ 0.68
HDAC8-202ENST00000373556 NDUFB10O96000 172 aa19.27■□□□□ 0.68
HDAC8-202ENST00000373556 Q7L0L9 218 aa19.27■□□□□ 0.68
HDAC8-202ENST00000373556 IFNL3Q8IZI9 196 aa19.27■□□□□ 0.68
HDAC8-202ENST00000373556 PI4K2BQ8TCG2 481 aa19.27■□□□□ 0.68
HDAC8-202ENST00000373556 LTBP2Q14767 1821 aa19.27■□□□□ 0.68
HDAC8-202ENST00000373556 TTC41PQ6P2S7 1318 aa19.26■□□□□ 0.67
HDAC8-202ENST00000373556 IGKV6D-41A0A0C4DH26 115 aa19.26■□□□□ 0.67
HDAC8-202ENST00000373556 PATL2C9JE40 543 aaKnown RBP19.26■□□□□ 0.67
HDAC8-202ENST00000373556 TAL1P17542 331 aaPredicted RBP19.26■□□□□ 0.67
HDAC8-202ENST00000373556 SLC4A3P48751 1232 aa19.26■□□□□ 0.67
HDAC8-202ENST00000373556 LRRC41Q15345 812 aa19.26■□□□□ 0.67
HDAC8-202ENST00000373556 ZNF792Q3KQV3 632 aa19.26■□□□□ 0.67
HDAC8-202ENST00000373556 SNRNP48Q6IEG0 339 aaKnown RBP19.26■□□□□ 0.67
HDAC8-202ENST00000373556 SLC39A5Q6ZMH5 540 aa19.26■□□□□ 0.67
HDAC8-202ENST00000373556 ZNF444Q8N0Y2 327 aaPredicted RBP19.26■□□□□ 0.67
HDAC8-202ENST00000373556 FERMT2Q96AC1 680 aa19.26■□□□□ 0.67
HDAC8-202ENST00000373556 TINF2Q9BSI4 451 aa19.26■□□□□ 0.67
HDAC8-202ENST00000373556 FSD1Q9BTV5 496 aa19.26■□□□□ 0.67
HDAC8-202ENST00000373556 COL6A3P12111 3177 aa19.26■□□□□ 0.67
HDAC8-202ENST00000373556 ERC2O15083 957 aa19.25■□□□□ 0.67
HDAC8-202ENST00000373556 ADCYAP1R1P41586 468 aa19.25■□□□□ 0.67
HDAC8-202ENST00000373556 DEFB123Q8N688 67 aa19.25■□□□□ 0.67
HDAC8-202ENST00000373556 CEP95Q96GE4 821 aa19.25■□□□□ 0.67
HDAC8-202ENST00000373556 LBHD1Q9BQE6 289 aaPredicted RBP19.25■□□□□ 0.67
HDAC8-202ENST00000373556 PRKAG2Q9UGJ0 569 aa19.25■□□□□ 0.67
HDAC8-202ENST00000373556 RIPK3Q9Y572 518 aa19.25■□□□□ 0.67
HDAC8-202ENST00000373556 COPB2P35606 906 aa19.24■□□□□ 0.67
HDAC8-202ENST00000373556 LRRFIP1Q32MZ4 808 aaKnown RBP19.24■□□□□ 0.67
HDAC8-202ENST00000373556 TRIM60Q495X7 471 aa19.24■□□□□ 0.67
HDAC8-202ENST00000373556 CPXCR1Q8N123 301 aa19.24■□□□□ 0.67
HDAC8-202ENST00000373556 LRRC47Q8N1G4 583 aaKnown RBP19.24■□□□□ 0.67
HDAC8-202ENST00000373556 PRPF38AQ8NAV1 312 aaKnown RBP19.24■□□□□ 0.67
HDAC8-202ENST00000373556 KIFC2Q96AC6 838 aa19.24■□□□□ 0.67
HDAC8-202ENST00000373556 TEX13BQ9BXU2 312 aa19.24■□□□□ 0.67
HDAC8-202ENST00000373556 ZNF287Q9HBT7 754 aa19.24■□□□□ 0.67
HDAC8-202ENST00000373556 XPNPEP3Q9NQH7 507 aa19.24■□□□□ 0.67
HDAC8-202ENST00000373556 RARBP10826 455 aa19.23■□□□□ 0.67
HDAC8-202ENST00000373556 MX1P20591 662 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms