RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 GOLGA8DPQ0D2H9 430 aa21.33■■□□□ 1.01
USP49-202ENST00000373010 CCDC178Q5BJE1 867 aa21.33■■□□□ 1.01
USP49-202ENST00000373010 DDX60LQ5H9U9 1706 aaKnown RBP21.33■■□□□ 1
USP49-202ENST00000373010 POLRMTO00411 1230 aaKnown RBP21.33■■□□□ 1
USP49-202ENST00000373010 PCDHA4Q9UN74 947 aa21.33■■□□□ 1
USP49-202ENST00000373010 FLT1P17948 1338 aa21.33■■□□□ 1
USP49-202ENST00000373010 ZNF18P17022 549 aa21.32■■□□□ 1
USP49-202ENST00000373010 HOXA10P31260 410 aaPredicted RBP21.32■■□□□ 1
USP49-202ENST00000373010 RHBDL3P58872 404 aa21.32■■□□□ 1
USP49-202ENST00000373010 SLC27A3Q5K4L6 730 aa21.32■■□□□ 1
USP49-202ENST00000373010 WWC2Q6AWC2 1192 aa21.32■■□□□ 1
USP49-202ENST00000373010 CPVLQ9H3G5 476 aa21.32■■□□□ 1
USP49-202ENST00000373010 QTRT2Q9H974 415 aaKnown RBP21.32■■□□□ 1
USP49-202ENST00000373010 SH3GLB2Q9NR46 395 aa21.32■■□□□ 1
USP49-202ENST00000373010 KCND1Q9NSA2 647 aa21.32■■□□□ 1
USP49-202ENST00000373010 PODXL2Q9NZ53 605 aa21.32■■□□□ 1
USP49-202ENST00000373010 SNED1Q8TER0 1413 aa21.32■■□□□ 1
USP49-202ENST00000373010 CDK11BP21127 795 aaKnown RBP21.31■■□□□ 1
USP49-202ENST00000373010 NT5C2P49902 561 aa21.31■■□□□ 1
USP49-202ENST00000373010 GNAQP50148 359 aa21.31■■□□□ 1
USP49-202ENST00000373010 CCDC34Q96HJ3 373 aa21.31■■□□□ 1
USP49-202ENST00000373010 EYA3Q99504 573 aa21.31■■□□□ 1
USP49-202ENST00000373010 SAMSN1Q9NSI8 373 aaKnown RBP21.31■■□□□ 1
USP49-202ENST00000373010 PAXBP1Q9Y5B6 917 aa21.31■■□□□ 1
USP49-202ENST00000373010 MYH1P12882 1939 aa21.31■■□□□ 1
USP49-202ENST00000373010 TOP1P11387 765 aaKnown RBP21.31■■□□□ 1
USP49-202ENST00000373010 CD44P16070 742 aaKnown RBP21.31■■□□□ 1
USP49-202ENST00000373010 DPYDQ12882 1025 aa21.31■■□□□ 1
USP49-202ENST00000373010 C16orf86Q6ZW13 317 aa21.31■■□□□ 1
USP49-202ENST00000373010 HEATR3Q7Z4Q2 680 aa21.31■■□□□ 1
USP49-202ENST00000373010 KLHL10Q6JEL2 608 aa21.3■■□□□ 1
USP49-202ENST00000373010 CRAMP1Q96RY5 1269 aa21.3■■□□□ 1
USP49-202ENST00000373010 PALM3A6NDB9 673 aaPredicted RBP21.3■■□□□ 1
USP49-202ENST00000373010 RIMBP2O15034 1052 aa21.3■■□□□ 1
USP49-202ENST00000373010 CTIFO43310 598 aaKnown RBP21.3■■□□□ 1
USP49-202ENST00000373010 E2F4Q16254 413 aa21.3■■□□□ 1
USP49-202ENST00000373010 SMYD4Q8IYR2 804 aaPredicted RBP21.3■■□□□ 1
USP49-202ENST00000373010 C4orf32Q8N8J7 132 aa21.3■■□□□ 1
USP49-202ENST00000373010 CCDC112Q8NEF3 446 aa21.29■■□□□ 1
USP49-202ENST00000373010 M0R2N6 131 aa21.29■■□□□ 1
USP49-202ENST00000373010 PLCG2P16885 1265 aa21.29■■□□□ 1
USP49-202ENST00000373010 ERCC5P28715 1186 aaPredicted RBP21.29■■□□□ 1
USP49-202ENST00000373010 CDC25AP30304 524 aa21.29■■□□□ 1
USP49-202ENST00000373010 STX17P56962 302 aa21.29■■□□□ 1
USP49-202ENST00000373010 GTF2IP78347 998 aa21.29■■□□□ 1
USP49-202ENST00000373010 DHX8Q14562 1220 aaKnown RBP21.29■■□□□ 1
USP49-202ENST00000373010 CERS3Q8IU89 383 aa21.29■■□□□ 1
USP49-202ENST00000373010 PPP1R13BQ96KQ4 1090 aa21.29■■□□□ 1
USP49-202ENST00000373010 MAP7D2Q96T17 732 aa21.29■■□□□ 1
USP49-202ENST00000373010 BLZF1Q9H2G9 400 aa21.29■■□□□ 1
USP49-202ENST00000373010 ZNF287Q9HBT7 754 aa21.29■■□□□ 1
USP49-202ENST00000373010 PCDHA6Q9UN73 950 aa21.29■■□□□ 1
USP49-202ENST00000373010 PCDHA8Q9Y5H6 950 aa21.29■■□□□ 1
USP49-202ENST00000373010 KLRF2D3W0D1 207 aa21.28■■□□□ 1
USP49-202ENST00000373010 STXBP3O00186 592 aa21.28■■□□□ 1
USP49-202ENST00000373010 IQUBQ8NA54 791 aa21.28■■□□□ 1
USP49-202ENST00000373010 NEDD1Q8NHV4 660 aa21.28■■□□□ 1
USP49-202ENST00000373010 FAM163AQ96GL9 167 aaPredicted RBP21.28■■□□□ 1
USP49-202ENST00000373010 BRWD3Q6RI45 1802 aa21.28■■□□□ 1
USP49-202ENST00000373010 GAKO14976 1311 aa21.28■■□□□ 1
USP49-202ENST00000373010 CCDC194A0A1B0GVG4 234 aa21.28■■□□□ 1
USP49-202ENST00000373010 NRDCO43847 1150 aa21.28■■□□□ 1
USP49-202ENST00000373010 PROM2Q8N271 834 aa21.28■■□□□ 1
USP49-202ENST00000373010 GSDMAQ96QA5 445 aa21.28■■□□□ 1
USP49-202ENST00000373010 LTBP1Q14766 1721 aa21.28■■□□□ 1
USP49-202ENST00000373010 PPEF1O14829 653 aaPredicted RBP21.27■■□□□ 1
USP49-202ENST00000373010 CUL4BQ13620 913 aa21.27■■□□□ 1
USP49-202ENST00000373010 PDXDC2PQ6P474 469 aa21.27■■□□□ 1
USP49-202ENST00000373010 TBC1D22AQ8WUA7 517 aa21.27■■□□□ 1
USP49-202ENST00000373010 BARHL2Q9NY43 387 aa21.27■■□□□ 1
USP49-202ENST00000373010 DAGLAQ9Y4D2 1042 aa21.27■■□□□ 1
USP49-202ENST00000373010 KLRG2A4D1S0 409 aaPredicted RBP21.27■■□□□ 1
USP49-202ENST00000373010 INF2Q27J81 1249 aa21.27■■□□□ 1
USP49-202ENST00000373010 USP17L2Q6R6M4 530 aa21.27■■□□□ 1
USP49-202ENST00000373010 MTRQ99707 1265 aa21.27■■□□□ 1
USP49-202ENST00000373010 ARID3AQ99856 593 aa21.27■■□□□ 1
USP49-202ENST00000373010 ARL6IP4Q66PJ3 421 aaKnown RBP21.26■□□□□ 0.99
USP49-202ENST00000373010 KRT27Q7Z3Y8 459 aa21.26■□□□□ 0.99
USP49-202ENST00000373010 SLF2Q8IX21 1173 aa21.26■□□□□ 0.99
USP49-202ENST00000373010 CCDC148Q8NFR7 591 aa21.26■□□□□ 0.99
USP49-202ENST00000373010 CEP95Q96GE4 821 aa21.26■□□□□ 0.99
USP49-202ENST00000373010 TMX1Q9H3N1 280 aa21.26■□□□□ 0.99
USP49-202ENST00000373010 LRRC37AA6NMS7 1700 aa21.26■□□□□ 0.99
USP49-202ENST00000373010 SYNRGQ9UMZ2 1314 aa21.26■□□□□ 0.99
USP49-202ENST00000373010 PSDA5PKW4 1024 aaPredicted RBP21.26■□□□□ 0.99
USP49-202ENST00000373010 PPP1R3GB7ZBB8 358 aa21.26■□□□□ 0.99
USP49-202ENST00000373010 F8W031 263 aaPredicted RBP21.26■□□□□ 0.99
USP49-202ENST00000373010 KCNJ6P48051 423 aa21.26■□□□□ 0.99
USP49-202ENST00000373010 TBX2Q13207 712 aaPredicted RBP21.26■□□□□ 0.99
USP49-202ENST00000373010 TXNRD1Q16881 649 aa21.26■□□□□ 0.99
USP49-202ENST00000373010 TMEM60Q9H2L4 133 aa21.26■□□□□ 0.99
USP49-202ENST00000373010 ANKRD31Q8N7Z5 1873 aa21.25■□□□□ 0.99
USP49-202ENST00000373010 PARP1P09874 1014 aaKnown RBP21.25■□□□□ 0.99
USP49-202ENST00000373010 SPATA1Q5VX52 437 aa21.25■□□□□ 0.99
USP49-202ENST00000373010 SP8Q8IXZ3 490 aa21.25■□□□□ 0.99
USP49-202ENST00000373010 DAGLBQ8NCG7 672 aa21.25■□□□□ 0.99
USP49-202ENST00000373010 COBLO75128 1261 aa21.25■□□□□ 0.99
USP49-202ENST00000373010 LONP1P36776 959 aaKnown RBP21.25■□□□□ 0.99
USP49-202ENST00000373010 PICALMQ13492 652 aa21.25■□□□□ 0.99
USP49-202ENST00000373010 MTERF4Q7Z6M4 381 aaKnown RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms