RNA–Protein interactions for RNA: ENST00000372409.7

PCIF1-201, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCIF1, Length 2,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-201ENST00000372409 RASSF8Q8NHQ8 419 aa18.91■□□□□ 0.62
PCIF1-201ENST00000372409 RASGRP4Q8TDF6 673 aa18.91■□□□□ 0.62
PCIF1-201ENST00000372409 KAT14Q9H8E8 782 aa18.91■□□□□ 0.62
PCIF1-201ENST00000372409 TAB2Q9NYJ8 693 aa18.91■□□□□ 0.62
PCIF1-201ENST00000372409 A0A1B0GUL6 1792 aa18.91■□□□□ 0.62
PCIF1-201ENST00000372409 PLA2G4AP47712 749 aa18.9■□□□□ 0.62
PCIF1-201ENST00000372409 PAK1Q13153 545 aa18.9■□□□□ 0.62
PCIF1-201ENST00000372409 PDXDC2PQ6P474 469 aa18.9■□□□□ 0.62
PCIF1-201ENST00000372409 CNGA4Q8IV77 575 aa18.9■□□□□ 0.62
PCIF1-201ENST00000372409 GPR161Q8N6U8 529 aaKnown RBP18.9■□□□□ 0.62
PCIF1-201ENST00000372409 LINC00116Q8NCU8 138 aa18.9■□□□□ 0.62
PCIF1-201ENST00000372409 MTRQ99707 1265 aa18.9■□□□□ 0.62
PCIF1-201ENST00000372409 ATP8A2Q9NTI2 1148 aa18.9■□□□□ 0.62
PCIF1-201ENST00000372409 SEMA3EO15041 775 aa18.9■□□□□ 0.62
PCIF1-201ENST00000372409 USP17L8P0C7I0 530 aa18.9■□□□□ 0.62
PCIF1-201ENST00000372409 KIF5BP33176 963 aa18.9■□□□□ 0.62
PCIF1-201ENST00000372409 ZNF569Q5MCW4 686 aa18.9■□□□□ 0.62
PCIF1-201ENST00000372409 NELFBQ8WX92 580 aa18.9■□□□□ 0.62
PCIF1-201ENST00000372409 SMARCC1Q92922 1105 aaPredicted RBP18.9■□□□□ 0.62
PCIF1-201ENST00000372409 NUP88Q99567 741 aaPredicted RBP18.9■□□□□ 0.62
PCIF1-201ENST00000372409 ARPP21Q9UBL0 812 aaPredicted RBP18.9■□□□□ 0.62
PCIF1-201ENST00000372409 GTPBP6O43824 516 aaPredicted RBP18.89■□□□□ 0.62
PCIF1-201ENST00000372409 TXLNAP40222 546 aa18.89■□□□□ 0.62
PCIF1-201ENST00000372409 TRAPPC10P48553 1259 aa18.89■□□□□ 0.62
PCIF1-201ENST00000372409 DZIP1Q86YF9 867 aaKnown RBP18.89■□□□□ 0.62
PCIF1-201ENST00000372409 GOLGA1Q92805 767 aa18.89■□□□□ 0.62
PCIF1-201ENST00000372409 NUTM2BA6NNL0 878 aaPredicted RBP18.89■□□□□ 0.61
PCIF1-201ENST00000372409 NUTM2EB1AL46 878 aaPredicted RBP18.89■□□□□ 0.61
PCIF1-201ENST00000372409 ACRBPQ8NEB7 543 aa18.89■□□□□ 0.61
PCIF1-201ENST00000372409 ANKRD20A12PQ8NF67 263 aa18.89■□□□□ 0.61
PCIF1-201ENST00000372409 PUF60Q9UHX1 559 aaKnown RBP18.89■□□□□ 0.61
PCIF1-201ENST00000372409 GDAQ9Y2T3 454 aa18.89■□□□□ 0.61
PCIF1-201ENST00000372409 THRAP3Q9Y2W1 955 aaKnown RBP18.89■□□□□ 0.61
PCIF1-201ENST00000372409 ERICH4A6NGS2 130 aa18.88■□□□□ 0.61
PCIF1-201ENST00000372409 POLR3GO15318 223 aaPredicted RBP18.88■□□□□ 0.61
PCIF1-201ENST00000372409 RPN1P04843 607 aaKnown RBP18.88■□□□□ 0.61
PCIF1-201ENST00000372409 STAT6P42226 847 aa18.88■□□□□ 0.61
PCIF1-201ENST00000372409 TFAP4Q01664 338 aa18.88■□□□□ 0.61
PCIF1-201ENST00000372409 BLIDQ8IZY5 108 aa18.88■□□□□ 0.61
PCIF1-201ENST00000372409 NLRP3Q96P20 1036 aa18.88■□□□□ 0.61
PCIF1-201ENST00000372409 PARD6BQ9BYG5 372 aa18.88■□□□□ 0.61
PCIF1-201ENST00000372409 SCN7AQ01118 1682 aa18.88■□□□□ 0.61
PCIF1-201ENST00000372409 RSRC2Q7L4I2 434 aaKnown RBP18.88■□□□□ 0.61
PCIF1-201ENST00000372409 PYM1Q9BRP8 204 aaKnown RBP18.88■□□□□ 0.61
PCIF1-201ENST00000372409 RWDD2AQ9UIY3 292 aa18.88■□□□□ 0.61
PCIF1-201ENST00000372409 DLEC1Q9Y238 1755 aa18.88■□□□□ 0.61
PCIF1-201ENST00000372409 KCNJ18B7U540 433 aa18.87■□□□□ 0.61
PCIF1-201ENST00000372409 PES1O00541 588 aaKnown RBP18.87■□□□□ 0.61
PCIF1-201ENST00000372409 CALML3P27482 149 aa18.87■□□□□ 0.61
PCIF1-201ENST00000372409 COPB1P53618 953 aaKnown RBP18.87■□□□□ 0.61
PCIF1-201ENST00000372409 KCNJ12Q14500 433 aa18.87■□□□□ 0.61
PCIF1-201ENST00000372409 KIF4BQ2VIQ3 1234 aa18.87■□□□□ 0.61
PCIF1-201ENST00000372409 RCSD1Q6JBY9 416 aa18.87■□□□□ 0.61
PCIF1-201ENST00000372409 CC2D1AQ6P1N0 951 aaPredicted RBP18.87■□□□□ 0.61
PCIF1-201ENST00000372409 STAG2Q8N3U4 1231 aa18.87■□□□□ 0.61
PCIF1-201ENST00000372409 FAM205AQ6ZU69 1335 aa18.87■□□□□ 0.61
PCIF1-201ENST00000372409 MYH8P13535 1937 aa18.87■□□□□ 0.61
PCIF1-201ENST00000372409 USP5P45974 858 aa18.87■□□□□ 0.61
PCIF1-201ENST00000372409 ZNF658Q5TYW1 1059 aaPredicted RBP18.87■□□□□ 0.61
PCIF1-201ENST00000372409 TXNRD3Q86VQ6 643 aa18.87■□□□□ 0.61
PCIF1-201ENST00000372409 NBPF5PQ86XG9 351 aaPredicted RBP18.87■□□□□ 0.61
PCIF1-201ENST00000372409 PNMA1Q8ND90 353 aa18.87■□□□□ 0.61
PCIF1-201ENST00000372409 DYNLL2Q96FJ2 89 aa18.87■□□□□ 0.61
PCIF1-201ENST00000372409 PLIN2Q99541 437 aa18.87■□□□□ 0.61
PCIF1-201ENST00000372409 RMND1Q9NWS8 449 aa18.87■□□□□ 0.61
PCIF1-201ENST00000372409 RREB1Q92766 1687 aa18.87■□□□□ 0.61
PCIF1-201ENST00000372409 TCP11X2Q5H9J9 407 aa18.87■□□□□ 0.61
PCIF1-201ENST00000372409 RASGRP2Q7LDG7 609 aa18.87■□□□□ 0.61
PCIF1-201ENST00000372409 RABGGTAQ92696 567 aa18.87■□□□□ 0.61
PCIF1-201ENST00000372409 LIMA1Q9UHB6 759 aaKnown RBP18.87■□□□□ 0.61
PCIF1-201ENST00000372409 CCDC194A0A1B0GVG4 234 aa18.86■□□□□ 0.61
PCIF1-201ENST00000372409 PRCPP42785 496 aa18.86■□□□□ 0.61
PCIF1-201ENST00000372409 CHMP4BP1P59074 171 aa18.86■□□□□ 0.61
PCIF1-201ENST00000372409 SPAG1Q07617 926 aa18.86■□□□□ 0.61
PCIF1-201ENST00000372409 ARFGAP3Q9NP61 516 aa18.86■□□□□ 0.61
PCIF1-201ENST00000372409 ABHD10Q9NUJ1 306 aa18.86■□□□□ 0.61
PCIF1-201ENST00000372409 SRP68Q9UHB9 627 aaKnown RBP18.86■□□□□ 0.61
PCIF1-201ENST00000372409 KDM4FA0A1W2PPD8 638 aa18.86■□□□□ 0.61
PCIF1-201ENST00000372409 PP2D1A8MPX8 630 aa18.86■□□□□ 0.61
PCIF1-201ENST00000372409 LONP1P36776 959 aaKnown RBP18.86■□□□□ 0.61
PCIF1-201ENST00000372409 UBXN1Q04323 297 aa18.86■□□□□ 0.61
PCIF1-201ENST00000372409 CCDC51Q96ER9 411 aa18.86■□□□□ 0.61
PCIF1-201ENST00000372409 SETDB2Q96T68 719 aa18.86■□□□□ 0.61
PCIF1-201ENST00000372409 MKNK2Q9HBH9 465 aa18.86■□□□□ 0.61
PCIF1-201ENST00000372409 ITIH6Q6UXX5 1313 aa18.86■□□□□ 0.61
PCIF1-201ENST00000372409 TRIM49BA6NDI0 452 aa18.85■□□□□ 0.61
PCIF1-201ENST00000372409 RNF225M0QZC1 329 aaPredicted RBP18.85■□□□□ 0.61
PCIF1-201ENST00000372409 SASH3O75995 380 aa18.85■□□□□ 0.61
PCIF1-201ENST00000372409 TBC1D8O95759 1140 aa18.85■□□□□ 0.61
PCIF1-201ENST00000372409 ERVK-24P63145 666 aa18.85■□□□□ 0.61
PCIF1-201ENST00000372409 SBK1Q52WX2 424 aa18.85■□□□□ 0.61
PCIF1-201ENST00000372409 PCDHA4Q9UN74 947 aa18.85■□□□□ 0.61
PCIF1-201ENST00000372409 ABL1P00519 1130 aa18.85■□□□□ 0.61
PCIF1-201ENST00000372409 KRT9P35527 623 aa18.85■□□□□ 0.61
PCIF1-201ENST00000372409 ARL6IP4Q66PJ3 421 aaKnown RBP18.85■□□□□ 0.61
PCIF1-201ENST00000372409 DTHD1Q6ZMT9 781 aa18.85■□□□□ 0.61
PCIF1-201ENST00000372409 HEATR3Q7Z4Q2 680 aa18.85■□□□□ 0.61
PCIF1-201ENST00000372409 TMTC1Q8IUR5 882 aa18.85■□□□□ 0.61
PCIF1-201ENST00000372409 SLC35F6Q8N357 371 aa18.85■□□□□ 0.61
PCIF1-201ENST00000372409 ANKRD2Q9GZV1 360 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms