RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 TEPSINQ96N21 525 aa30.31■■■□□ 2.44
ATPAF1-202ENST00000371937 POLR3EQ9NVU0 708 aa30.31■■■□□ 2.44
ATPAF1-202ENST00000371937 KRT2P35908 639 aa30.3■■■□□ 2.44
ATPAF1-202ENST00000371937 APOBEC3FQ8IUX4 373 aaKnown RBP30.3■■■□□ 2.44
ATPAF1-202ENST00000371937 DEFB129Q9H1M3 183 aa30.3■■■□□ 2.44
ATPAF1-202ENST00000371937 RIOX1Q9H6W3 641 aa30.3■■■□□ 2.44
ATPAF1-202ENST00000371937 JAG1P78504 1218 aa30.29■■■□□ 2.44
ATPAF1-202ENST00000371937 CAVIN1Q6NZI2 390 aaKnown RBP30.29■■■□□ 2.44
ATPAF1-202ENST00000371937 DCAF4Q8WV16 495 aa30.29■■■□□ 2.44
ATPAF1-202ENST00000371937 SHISA4Q96DD7 197 aa30.29■■■□□ 2.44
ATPAF1-202ENST00000371937 SEC63Q9UGP8 760 aaKnown RBP30.29■■■□□ 2.44
ATPAF1-202ENST00000371937 FRMPD2Q68DX3 1309 aaPredicted RBP30.29■■■□□ 2.44
ATPAF1-202ENST00000371937 ASTN2O75129 1339 aaPredicted RBP30.29■■■□□ 2.44
ATPAF1-202ENST00000371937 CALML3P27482 149 aa30.29■■■□□ 2.44
ATPAF1-202ENST00000371937 C9orf131Q5VYM1 1079 aa30.29■■■□□ 2.44
ATPAF1-202ENST00000371937 GMCL1P1Q8NEA9 526 aa30.29■■■□□ 2.44
ATPAF1-202ENST00000371937 YEATS4O95619 227 aa30.28■■■□□ 2.44
ATPAF1-202ENST00000371937 NLRP5P59047 1200 aa30.28■■■□□ 2.44
ATPAF1-202ENST00000371937 SYAP1Q96A49 352 aaPredicted RBP30.28■■■□□ 2.44
ATPAF1-202ENST00000371937 FTOQ9C0B1 505 aaKnown RBP eCLIP30.28■■■□□ 2.44
ATPAF1-202ENST00000371937 ZBTB21Q9ULJ3 1066 aa30.28■■■□□ 2.44
ATPAF1-202ENST00000371937 CAP2P40123 477 aa30.27■■■□□ 2.44
ATPAF1-202ENST00000371937 NASPP49321 788 aaPredicted RBP30.27■■■□□ 2.44
ATPAF1-202ENST00000371937 CCDC96Q2M329 555 aa30.27■■■□□ 2.44
ATPAF1-202ENST00000371937 SLFN13Q68D06 897 aa30.27■■■□□ 2.44
ATPAF1-202ENST00000371937 CCDC148Q8NFR7 591 aa30.27■■■□□ 2.44
ATPAF1-202ENST00000371937 TRPM4Q8TD43 1214 aa30.27■■■□□ 2.44
ATPAF1-202ENST00000371937 ARHGEF10LQ9HCE6 1279 aa30.27■■■□□ 2.44
ATPAF1-202ENST00000371937 GPCPD1Q9NPB8 672 aa30.27■■■□□ 2.44
ATPAF1-202ENST00000371937 DDNO94850 711 aaPredicted RBP30.26■■■□□ 2.44
ATPAF1-202ENST00000371937 LMOD1P29536 600 aaPredicted RBP30.26■■■□□ 2.44
ATPAF1-202ENST00000371937 EPS15P42566 896 aa30.26■■■□□ 2.44
ATPAF1-202ENST00000371937 ANO1Q5XXA6 986 aa30.26■■■□□ 2.44
ATPAF1-202ENST00000371937 HOOK2Q96ED9 719 aa30.26■■■□□ 2.44
ATPAF1-202ENST00000371937 UBA5Q9GZZ9 404 aa30.26■■■□□ 2.44
ATPAF1-202ENST00000371937 BARHL2Q9NY43 387 aa30.26■■■□□ 2.44
ATPAF1-202ENST00000371937 SCAF8Q9UPN6 1271 aaKnown RBP30.26■■■□□ 2.44
ATPAF1-202ENST00000371937 SLC1A4P43007 532 aa30.26■■■□□ 2.43
ATPAF1-202ENST00000371937 ANGEL2Q5VTE6 544 aaKnown RBP30.26■■■□□ 2.43
ATPAF1-202ENST00000371937 KCNG4Q8TDN1 519 aa30.26■■■□□ 2.43
ATPAF1-202ENST00000371937 CPVLQ9H3G5 476 aa30.26■■■□□ 2.43
ATPAF1-202ENST00000371937 UTRNP46939 3433 aa30.25■■■□□ 2.43
ATPAF1-202ENST00000371937 VEGFAP15692 232 aaPredicted RBP30.25■■■□□ 2.43
ATPAF1-202ENST00000371937 NR5A1Q13285 461 aa30.25■■■□□ 2.43
ATPAF1-202ENST00000371937 STK38Q15208 465 aa30.25■■■□□ 2.43
ATPAF1-202ENST00000371937 RILPL1Q5EBL4 403 aa30.25■■■□□ 2.43
ATPAF1-202ENST00000371937 GALNT17Q6IS24 598 aa30.25■■■□□ 2.43
ATPAF1-202ENST00000371937 HEATR3Q7Z4Q2 680 aa30.25■■■□□ 2.43
ATPAF1-202ENST00000371937 LINC00301Q8NCQ3 95 aa30.25■■■□□ 2.43
ATPAF1-202ENST00000371937 OXER1Q8TDS5 423 aa30.25■■■□□ 2.43
ATPAF1-202ENST00000371937 CCDC12Q8WUD4 166 aaPredicted RBP30.25■■■□□ 2.43
ATPAF1-202ENST00000371937 CLIC4Q9Y696 253 aa30.25■■■□□ 2.43
ATPAF1-202ENST00000371937 F5H6K3 240 aa30.24■■■□□ 2.43
ATPAF1-202ENST00000371937 ASNSP08243 561 aa30.24■■■□□ 2.43
ATPAF1-202ENST00000371937 KLRC3Q07444 240 aa30.24■■■□□ 2.43
ATPAF1-202ENST00000371937 GPKOWQ92917 476 aaPredicted RBP eCLIP30.24■■■□□ 2.43
ATPAF1-202ENST00000371937 GMCL1Q96IK5 515 aa30.24■■■□□ 2.43
ATPAF1-202ENST00000371937 VAT1LQ9HCJ6 419 aa30.24■■■□□ 2.43
ATPAF1-202ENST00000371937 hCG_1984214I3L0E3 225 aa30.24■■■□□ 2.43
ATPAF1-202ENST00000371937 RAD21O60216 631 aa30.24■■■□□ 2.43
ATPAF1-202ENST00000371937 WWC2Q6AWC2 1192 aa30.24■■■□□ 2.43
ATPAF1-202ENST00000371937 HOMER1Q86YM7 354 aa30.24■■■□□ 2.43
ATPAF1-202ENST00000371937 ZNF713Q8N859 430 aaPredicted RBP30.24■■■□□ 2.43
ATPAF1-202ENST00000371937 NPY5RQ15761 445 aa30.23■■■□□ 2.43
ATPAF1-202ENST00000371937 GPR162Q16538 588 aa30.23■■■□□ 2.43
ATPAF1-202ENST00000371937 PIGSQ96S52 555 aa30.23■■■□□ 2.43
ATPAF1-202ENST00000371937 GINM1Q9NU53 330 aa30.23■■■□□ 2.43
ATPAF1-202ENST00000371937 PHF20L1A8MW92 1017 aa30.22■■■□□ 2.43
ATPAF1-202ENST00000371937 SF3A1Q15459 793 aaKnown RBP30.22■■■□□ 2.43
ATPAF1-202ENST00000371937 TPRNQ4KMQ1 711 aa30.22■■■□□ 2.43
ATPAF1-202ENST00000371937 DCAF15Q66K64 600 aa30.22■■■□□ 2.43
ATPAF1-202ENST00000371937 DPY19L2Q6NUT2 758 aa30.22■■■□□ 2.43
ATPAF1-202ENST00000371937 KCTD1Q719H9 257 aa30.22■■■□□ 2.43
ATPAF1-202ENST00000371937 PGBD1Q96JS3 809 aa30.22■■■□□ 2.43
ATPAF1-202ENST00000371937 ADARB2Q9NS39 739 aaKnown RBP30.22■■■□□ 2.43
ATPAF1-202ENST00000371937 PPP2R3BQ9Y5P8 575 aa30.22■■■□□ 2.43
ATPAF1-202ENST00000371937 STXBP3O00186 592 aa30.22■■■□□ 2.43
ATPAF1-202ENST00000371937 SH2D4AQ9H788 454 aa30.22■■■□□ 2.43
ATPAF1-202ENST00000371937 TMEM63CQ9P1W3 806 aa30.22■■■□□ 2.43
ATPAF1-202ENST00000371937 ISY1Q9ULR0 285 aaKnown RBP30.22■■■□□ 2.43
ATPAF1-202ENST00000371937 TMX2Q9Y320 296 aa30.22■■■□□ 2.43
ATPAF1-202ENST00000371937 SPTLC2O15270 562 aa30.21■■■□□ 2.43
ATPAF1-202ENST00000371937 ME1P48163 572 aa30.21■■■□□ 2.43
ATPAF1-202ENST00000371937 ADGRF4Q8IZF3 695 aa30.21■■■□□ 2.43
ATPAF1-202ENST00000371937 GGA3Q9NZ52 723 aa30.21■■■□□ 2.43
ATPAF1-202ENST00000371937 PCDHA4Q9UN74 947 aa30.21■■■□□ 2.43
ATPAF1-202ENST00000371937 A0A1W2PRG0 241 aa30.2■■■□□ 2.43
ATPAF1-202ENST00000371937 NDUFB10O96000 172 aa30.2■■■□□ 2.43
ATPAF1-202ENST00000371937 HIRAP54198 1017 aaPredicted RBP30.2■■■□□ 2.43
ATPAF1-202ENST00000371937 SLC39A14Q15043 492 aa30.2■■■□□ 2.43
ATPAF1-202ENST00000371937 JMJD4Q9H9V9 463 aa30.2■■■□□ 2.43
ATPAF1-202ENST00000371937 GOPCQ9HD26 462 aa30.2■■■□□ 2.43
ATPAF1-202ENST00000371937 GRIN3BO60391 1043 aa30.19■■■□□ 2.42
ATPAF1-202ENST00000371937 NBPF12Q5TAG4 269 aaPredicted RBP30.19■■■□□ 2.42
ATPAF1-202ENST00000371937 TTBK2Q6IQ55 1244 aa30.19■■■□□ 2.42
ATPAF1-202ENST00000371937 BLIDQ8IZY5 108 aa30.19■■■□□ 2.42
ATPAF1-202ENST00000371937 DAGLBQ8NCG7 672 aa30.19■■■□□ 2.42
ATPAF1-202ENST00000371937 TNFRSF25Q93038 417 aa30.19■■■□□ 2.42
ATPAF1-202ENST00000371937 PITPNM2Q9BZ72 1349 aa30.19■■■□□ 2.42
ATPAF1-202ENST00000371937 PNMA6FA0A0J9YX94 578 aa30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms