RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 ALKQ9UM73 1620 aa10.95□□□□□ -0.66
SCAF11-202ENST00000369367 C21orf2O43822 256 aa10.95□□□□□ -0.66
SCAF11-202ENST00000369367 XKR9Q5GH70 373 aa10.95□□□□□ -0.66
SCAF11-202ENST00000369367 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.95□□□□□ -0.66
SCAF11-202ENST00000369367 SDR42E1Q8WUS8 393 aa10.95□□□□□ -0.66
SCAF11-202ENST00000369367 FDX1P10109 184 aa10.95□□□□□ -0.66
SCAF11-202ENST00000369367 PAK1Q13153 545 aa10.95□□□□□ -0.66
SCAF11-202ENST00000369367 COL4A3BPQ9Y5P4 624 aa10.95□□□□□ -0.66
SCAF11-202ENST00000369367 LIG4P49917 911 aa10.94□□□□□ -0.66
SCAF11-202ENST00000369367 DMP1Q13316 513 aaPredicted RBP10.94□□□□□ -0.66
SCAF11-202ENST00000369367 MICALCLQ6ZW33 695 aa10.94□□□□□ -0.66
SCAF11-202ENST00000369367 MTRF1LQ9UGC7 380 aaKnown RBP10.94□□□□□ -0.66
SCAF11-202ENST00000369367 SRP68Q9UHB9 627 aaKnown RBP10.94□□□□□ -0.66
SCAF11-202ENST00000369367 USP31Q70CQ4 1352 aa10.94□□□□□ -0.66
SCAF11-202ENST00000369367 CPSF1Q10570 1443 aaKnown RBP10.94□□□□□ -0.66
SCAF11-202ENST00000369367 POLGP54098 1239 aaPredicted RBP10.94□□□□□ -0.66
SCAF11-202ENST00000369367 ZSCAN23Q3MJ62 389 aa10.94□□□□□ -0.66
SCAF11-202ENST00000369367 SPECC1LQ69YQ0 1117 aa10.94□□□□□ -0.66
SCAF11-202ENST00000369367 COA7Q96BR5 231 aa10.94□□□□□ -0.66
SCAF11-202ENST00000369367 SUGT1Q9Y2Z0 365 aa10.94□□□□□ -0.66
SCAF11-202ENST00000369367 CCND2P30279 289 aa10.94□□□□□ -0.66
SCAF11-202ENST00000369367 TRAPPC10P48553 1259 aa10.94□□□□□ -0.66
SCAF11-202ENST00000369367 RNF181Q9P0P0 153 aa10.94□□□□□ -0.66
SCAF11-202ENST00000369367 LRFN2Q9ULH4 789 aa10.94□□□□□ -0.66
SCAF11-202ENST00000369367 RIMBP3CA6NJZ7 1639 aa10.94□□□□□ -0.66
SCAF11-202ENST00000369367 RIMBP3BA6NNM3 1639 aa10.94□□□□□ -0.66
SCAF11-202ENST00000369367 RIMBP3Q9UFD9 1639 aa10.94□□□□□ -0.66
SCAF11-202ENST00000369367 CTAGE15A4D2H0 777 aa10.94□□□□□ -0.66
SCAF11-202ENST00000369367 CTAGE9A4FU28 777 aa10.94□□□□□ -0.66
SCAF11-202ENST00000369367 CTAGE8P0CG41 777 aa10.94□□□□□ -0.66
SCAF11-202ENST00000369367 BIRC2Q13490 618 aa10.94□□□□□ -0.66
SCAF11-202ENST00000369367 POSTNQ15063 836 aa10.94□□□□□ -0.66
SCAF11-202ENST00000369367 PRR16Q569H4 304 aa10.94□□□□□ -0.66
SCAF11-202ENST00000369367 TMEM179Q6ZVK1 233 aa10.94□□□□□ -0.66
SCAF11-202ENST00000369367 CTAGE6Q86UF2 777 aa10.94□□□□□ -0.66
SCAF11-202ENST00000369367 CTAGE4Q8IX94 777 aa10.94□□□□□ -0.66
SCAF11-202ENST00000369367 AGTPBP1Q9UPW5 1226 aa10.94□□□□□ -0.66
SCAF11-202ENST00000369367 CDHR2Q9BYE9 1310 aa10.94□□□□□ -0.66
SCAF11-202ENST00000369367 AOC3Q16853 763 aa10.94□□□□□ -0.66
SCAF11-202ENST00000369367 ZNF526Q8TF50 670 aaPredicted RBP10.94□□□□□ -0.66
SCAF11-202ENST00000369367 PSMD1Q99460 953 aa10.94□□□□□ -0.66
SCAF11-202ENST00000369367 SPHKAPQ2M3C7 1700 aa10.94□□□□□ -0.66
SCAF11-202ENST00000369367 KRT19P08727 400 aa10.94□□□□□ -0.66
SCAF11-202ENST00000369367 GJC1P36383 396 aa10.94□□□□□ -0.66
SCAF11-202ENST00000369367 MIS18BP1Q6P0N0 1132 aa10.94□□□□□ -0.66
SCAF11-202ENST00000369367 HOXC10Q9NYD6 342 aa10.94□□□□□ -0.66
SCAF11-202ENST00000369367 PHLPP2Q6ZVD8 1323 aa10.94□□□□□ -0.66
SCAF11-202ENST00000369367 A0A1W2PRG0 241 aa10.93□□□□□ -0.66
SCAF11-202ENST00000369367 FAM204AQ9H8W3 233 aa10.93□□□□□ -0.66
SCAF11-202ENST00000369367 TRMT1Q9NXH9 659 aaKnown RBP10.93□□□□□ -0.66
SCAF11-202ENST00000369367 OR52Z1P0C646 297 aa10.93□□□□□ -0.66
SCAF11-202ENST00000369367 TNNI1P19237 187 aa10.93□□□□□ -0.66
SCAF11-202ENST00000369367 STX17P56962 302 aa10.93□□□□□ -0.66
SCAF11-202ENST00000369367 SLC7A3Q8WY07 619 aa10.93□□□□□ -0.66
SCAF11-202ENST00000369367 DNAJC25Q9H1X3 360 aa10.93□□□□□ -0.66
SCAF11-202ENST00000369367 C1orf167Q5SNV9 1468 aa10.93□□□□□ -0.66
SCAF11-202ENST00000369367 ARL1P40616 181 aaPredicted RBP10.93□□□□□ -0.66
SCAF11-202ENST00000369367 TNNC1P63316 161 aa10.93□□□□□ -0.66
SCAF11-202ENST00000369367 INF2Q27J81 1249 aa10.93□□□□□ -0.66
SCAF11-202ENST00000369367 ZMYM1Q5SVZ6 1142 aa10.93□□□□□ -0.66
SCAF11-202ENST00000369367 CCDC114Q96M63 670 aa10.93□□□□□ -0.66
SCAF11-202ENST00000369367 NACC1Q96RE7 527 aa10.93□□□□□ -0.66
SCAF11-202ENST00000369367 DDX25Q9UHL0 483 aaKnown RBP10.93□□□□□ -0.66
SCAF11-202ENST00000369367 POLR2DO15514 142 aaKnown RBP10.93□□□□□ -0.66
SCAF11-202ENST00000369367 CYP27B1O15528 508 aa10.93□□□□□ -0.66
SCAF11-202ENST00000369367 FGAP02671 866 aa10.93□□□□□ -0.66
SCAF11-202ENST00000369367 CD19P15391 556 aa10.93□□□□□ -0.66
SCAF11-202ENST00000369367 FNBP4Q8N3X1 1017 aaPredicted RBP10.93□□□□□ -0.66
SCAF11-202ENST00000369367 VPS54Q9P1Q0 977 aa10.93□□□□□ -0.66
SCAF11-202ENST00000369367 FMNL1O95466 1100 aaPredicted RBP10.93□□□□□ -0.66
SCAF11-202ENST00000369367 CALCOCO2Q13137 446 aa10.93□□□□□ -0.66
SCAF11-202ENST00000369367 BARGINQ6ZT62 677 aa10.93□□□□□ -0.66
SCAF11-202ENST00000369367 UBL4BQ8N7F7 174 aa10.93□□□□□ -0.66
SCAF11-202ENST00000369367 GIMAP8Q8ND71 665 aaPredicted RBP10.93□□□□□ -0.66
SCAF11-202ENST00000369367 RAB3IL1Q8TBN0 382 aa10.93□□□□□ -0.66
SCAF11-202ENST00000369367 ZBTB7AO95365 584 aa10.93□□□□□ -0.66
SCAF11-202ENST00000369367 GNAT1P11488 350 aa10.93□□□□□ -0.66
SCAF11-202ENST00000369367 SUSD4Q5VX71 490 aa10.93□□□□□ -0.66
SCAF11-202ENST00000369367 TTC14Q96N46 770 aa10.93□□□□□ -0.66
SCAF11-202ENST00000369367 BCCIPQ9P287 314 aaKnown RBP eCLIP10.93□□□□□ -0.66
SCAF11-202ENST00000369367 NCOA3Q9Y6Q9 1424 aa10.92□□□□□ -0.66
SCAF11-202ENST00000369367 ASIC2Q16515 512 aa10.92□□□□□ -0.66
SCAF11-202ENST00000369367 FAM102BQ5T8I3 360 aa10.92□□□□□ -0.66
SCAF11-202ENST00000369367 GPR161Q8N6U8 529 aaKnown RBP10.92□□□□□ -0.66
SCAF11-202ENST00000369367 PHKBQ93100 1093 aa10.92□□□□□ -0.66
SCAF11-202ENST00000369367 FAM81BQ96LP2 452 aa10.92□□□□□ -0.66
SCAF11-202ENST00000369367 CUEDC2Q9H467 287 aa10.92□□□□□ -0.66
SCAF11-202ENST00000369367 SEC31BQ9NQW1 1179 aa10.92□□□□□ -0.66
SCAF11-202ENST00000369367 FRMPD2Q68DX3 1309 aaPredicted RBP10.92□□□□□ -0.66
SCAF11-202ENST00000369367 SPOPO43791 374 aa10.92□□□□□ -0.66
SCAF11-202ENST00000369367 HSF2BPO75031 334 aa10.92□□□□□ -0.66
SCAF11-202ENST00000369367 HSPA1LP34931 641 aa10.92□□□□□ -0.66
SCAF11-202ENST00000369367 SLC9C1Q4G0N8 1177 aa10.92□□□□□ -0.66
SCAF11-202ENST00000369367 CFAP58Q5T655 872 aa10.92□□□□□ -0.66
SCAF11-202ENST00000369367 MAATS1Q7Z4T9 603 aa10.92□□□□□ -0.66
SCAF11-202ENST00000369367 SP8Q8IXZ3 490 aa10.92□□□□□ -0.66
SCAF11-202ENST00000369367 RNF26Q9BY78 433 aaPredicted RBP10.92□□□□□ -0.66
SCAF11-202ENST00000369367 METTL14Q9HCE5 456 aaKnown RBP10.92□□□□□ -0.66
SCAF11-202ENST00000369367 STAP2Q9UGK3 403 aa10.92□□□□□ -0.66
SCAF11-202ENST00000369367 DCUN1D2Q6PH85 259 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 454 ms