RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 CDC27P30260 824 aa24.04■■□□□ 1.44
SHISA4-201ENST00000362011 NOL9Q5SY16 702 aaKnown RBP24.04■■□□□ 1.44
SHISA4-201ENST00000362011 CPLX2Q6PUV4 134 aaKnown RBP24.04■■□□□ 1.44
SHISA4-201ENST00000362011 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.04■■□□□ 1.44
SHISA4-201ENST00000362011 SMC3Q9UQE7 1217 aa24.04■■□□□ 1.44
SHISA4-201ENST00000362011 BAZ2BQ9UIF8 2168 aaKnown RBP24.04■■□□□ 1.44
SHISA4-201ENST00000362011 IREB2P48200 963 aaKnown RBP24.03■■□□□ 1.44
SHISA4-201ENST00000362011 GRM4Q14833 912 aa24.03■■□□□ 1.44
SHISA4-201ENST00000362011 SIAH1Q8IUQ4 282 aa24.03■■□□□ 1.44
SHISA4-201ENST00000362011 SYNPO2Q9UMS6 1093 aa24.03■■□□□ 1.44
SHISA4-201ENST00000362011 MTMR7Q9Y216 660 aa24.03■■□□□ 1.44
SHISA4-201ENST00000362011 KIF5BP33176 963 aa24.02■■□□□ 1.44
SHISA4-201ENST00000362011 ADD1P35611 737 aaKnown RBP24.02■■□□□ 1.44
SHISA4-201ENST00000362011 SREBF2Q12772 1141 aa24.02■■□□□ 1.44
SHISA4-201ENST00000362011 TTLL12Q14166 644 aaPredicted RBP24.02■■□□□ 1.44
SHISA4-201ENST00000362011 PICK1Q9NRD5 415 aa24.02■■□□□ 1.44
SHISA4-201ENST00000362011 FAM217BQ9NTX9 383 aaPredicted RBP24.02■■□□□ 1.44
SHISA4-201ENST00000362011 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.02■■□□□ 1.44
SHISA4-201ENST00000362011 USP17L5A8MUK1 530 aa24.01■■□□□ 1.43
SHISA4-201ENST00000362011 CDKL5O76039 1030 aa24.01■■□□□ 1.43
SHISA4-201ENST00000362011 MAP3K9P80192 1104 aa24.01■■□□□ 1.43
SHISA4-201ENST00000362011 MAP3K11Q16584 847 aa24.01■■□□□ 1.43
SHISA4-201ENST00000362011 ARMC9Q7Z3E5 817 aa24.01■■□□□ 1.43
SHISA4-201ENST00000362011 NSUN7Q8NE18 718 aaKnown RBP24.01■■□□□ 1.43
SHISA4-201ENST00000362011 ZKSCAN4Q969J2 545 aaPredicted RBP24.01■■□□□ 1.43
SHISA4-201ENST00000362011 SH2D4AQ9H788 454 aa24.01■■□□□ 1.43
SHISA4-201ENST00000362011 CWC22Q9HCG8 908 aaKnown RBP24.01■■□□□ 1.43
SHISA4-201ENST00000362011 PARP14Q460N5 1801 aa24.01■■□□□ 1.43
SHISA4-201ENST00000362011 CTDNEP1O95476 244 aa24■■□□□ 1.43
SHISA4-201ENST00000362011 PRPF38BQ5VTL8 546 aaKnown RBP24■■□□□ 1.43
SHISA4-201ENST00000362011 SPRYD7Q5W111 196 aa24■■□□□ 1.43
SHISA4-201ENST00000362011 FBXO46Q6PJ61 603 aaPredicted RBP24■■□□□ 1.43
SHISA4-201ENST00000362011 SMARCC2Q8TAQ2 1214 aa24■■□□□ 1.43
SHISA4-201ENST00000362011 AS3MTQ9HBK9 375 aa24■■□□□ 1.43
SHISA4-201ENST00000362011 TMX2Q9Y320 296 aa24■■□□□ 1.43
SHISA4-201ENST00000362011 PTPDC1A2A3K4 754 aa23.99■■□□□ 1.43
SHISA4-201ENST00000362011 PARP1P09874 1014 aaKnown RBP23.99■■□□□ 1.43
SHISA4-201ENST00000362011 PDHBP11177 359 aa23.99■■□□□ 1.43
SHISA4-201ENST00000362011 GJB2P29033 226 aa23.99■■□□□ 1.43
SHISA4-201ENST00000362011 GNAQP50148 359 aa23.99■■□□□ 1.43
SHISA4-201ENST00000362011 HMGN5P82970 282 aaKnown RBP23.99■■□□□ 1.43
SHISA4-201ENST00000362011 CCDC84Q86UT8 332 aaPredicted RBP23.99■■□□□ 1.43
SHISA4-201ENST00000362011 GMCL1P1Q8NEA9 526 aa23.99■■□□□ 1.43
SHISA4-201ENST00000362011 ACER1Q8TDN7 264 aa23.99■■□□□ 1.43
SHISA4-201ENST00000362011 R3HDMLQ9H3Y0 253 aa23.99■■□□□ 1.43
SHISA4-201ENST00000362011 CSADQ9Y600 493 aa23.99■■□□□ 1.43
SHISA4-201ENST00000362011 A0A1W2PRG0 241 aa23.98■■□□□ 1.43
SHISA4-201ENST00000362011 JAK2O60674 1132 aa23.98■■□□□ 1.43
SHISA4-201ENST00000362011 NTRK3Q16288 839 aa23.98■■□□□ 1.43
SHISA4-201ENST00000362011 ASPRV1Q53RT3 343 aa23.98■■□□□ 1.43
SHISA4-201ENST00000362011 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.98■■□□□ 1.43
SHISA4-201ENST00000362011 TMTC3Q6ZXV5 915 aa23.98■■□□□ 1.43
SHISA4-201ENST00000362011 DCAF4Q8WV16 495 aa23.98■■□□□ 1.43
SHISA4-201ENST00000362011 GOPCQ9HD26 462 aa23.98■■□□□ 1.43
SHISA4-201ENST00000362011 MAD2L2Q9UI95 211 aa23.98■■□□□ 1.43
SHISA4-201ENST00000362011 LOC285556D6RIA3 1793 aa23.97■■□□□ 1.43
SHISA4-201ENST00000362011 SNHG28P0DPA3 235 aa23.97■■□□□ 1.43
SHISA4-201ENST00000362011 IFNAR1P17181 557 aa23.97■■□□□ 1.43
SHISA4-201ENST00000362011 PTPRAP18433 802 aa23.97■■□□□ 1.43
SHISA4-201ENST00000362011 MKRN3Q13064 507 aaKnown RBP23.97■■□□□ 1.43
SHISA4-201ENST00000362011 VGLL4Q14135 290 aa23.97■■□□□ 1.43
SHISA4-201ENST00000362011 SLFN13Q68D06 897 aa23.97■■□□□ 1.43
SHISA4-201ENST00000362011 ANKRD13AQ8IZ07 590 aa23.97■■□□□ 1.43
SHISA4-201ENST00000362011 FEZ1Q99689 392 aa23.97■■□□□ 1.43
SHISA4-201ENST00000362011 SNCAIPQ9Y6H5 919 aa23.97■■□□□ 1.43
SHISA4-201ENST00000362011 MYH15Q9Y2K3 1946 aa23.96■■□□□ 1.43
SHISA4-201ENST00000362011 PALM3A6NDB9 673 aaPredicted RBP23.96■■□□□ 1.43
SHISA4-201ENST00000362011 F5H6K3 240 aa23.96■■□□□ 1.43
SHISA4-201ENST00000362011 RAD21O60216 631 aa23.96■■□□□ 1.43
SHISA4-201ENST00000362011 FKTNO75072 461 aa23.96■■□□□ 1.43
SHISA4-201ENST00000362011 PLEKHA8P1O95397 391 aa23.96■■□□□ 1.43
SHISA4-201ENST00000362011 KLRC3Q07444 240 aa23.96■■□□□ 1.43
SHISA4-201ENST00000362011 USP17L2Q6R6M4 530 aa23.96■■□□□ 1.43
SHISA4-201ENST00000362011 RASGRP2Q7LDG7 609 aa23.96■■□□□ 1.43
SHISA4-201ENST00000362011 STAG2Q8N3U4 1231 aa23.96■■□□□ 1.43
SHISA4-201ENST00000362011 WDR18Q9BV38 432 aa23.96■■□□□ 1.43
SHISA4-201ENST00000362011 STK36Q9NRP7 1315 aa23.95■■□□□ 1.43
SHISA4-201ENST00000362011 UNCXA6NJT0 531 aa23.95■■□□□ 1.42
SHISA4-201ENST00000362011 DTNBO60941 627 aa23.95■■□□□ 1.42
SHISA4-201ENST00000362011 ALDH1A1P00352 501 aa23.95■■□□□ 1.42
SHISA4-201ENST00000362011 INHBEP58166 350 aa23.95■■□□□ 1.42
SHISA4-201ENST00000362011 SSRP1Q08945 709 aaKnown RBP23.95■■□□□ 1.42
SHISA4-201ENST00000362011 ZNF543Q08ER8 600 aa23.95■■□□□ 1.42
SHISA4-201ENST00000362011 CCDC96Q2M329 555 aa23.95■■□□□ 1.42
SHISA4-201ENST00000362011 GPATCH4Q5T3I0 446 aaKnown RBP23.95■■□□□ 1.42
SHISA4-201ENST00000362011 FAM184AQ8NB25 1140 aa23.95■■□□□ 1.42
SHISA4-201ENST00000362011 DDX11Q96FC9 970 aa23.95■■□□□ 1.42
SHISA4-201ENST00000362011 LZTS2Q9BRK4 669 aa23.95■■□□□ 1.42
SHISA4-201ENST00000362011 VCPKMTQ9H867 229 aa23.95■■□□□ 1.42
SHISA4-201ENST00000362011 KIF3AQ9Y496 699 aa23.95■■□□□ 1.42
SHISA4-201ENST00000362011 CNTNAP5Q8WYK1 1306 aa23.95■■□□□ 1.42
SHISA4-201ENST00000362011 KLRF2D3W0D1 207 aa23.94■■□□□ 1.42
SHISA4-201ENST00000362011 FMNL1O95466 1100 aaPredicted RBP23.94■■□□□ 1.42
SHISA4-201ENST00000362011 NDUFB10O96000 172 aa23.94■■□□□ 1.42
SHISA4-201ENST00000362011 TRIM22Q8IYM9 498 aa23.94■■□□□ 1.42
SHISA4-201ENST00000362011 GMCL1Q96IK5 515 aa23.94■■□□□ 1.42
SHISA4-201ENST00000362011 KIAA1683Q9H0B3 1180 aa23.94■■□□□ 1.42
SHISA4-201ENST00000362011 ORC3Q9UBD5 711 aaPredicted RBP23.94■■□□□ 1.42
SHISA4-201ENST00000362011 FRMPD2Q68DX3 1309 aaPredicted RBP23.94■■□□□ 1.42
SHISA4-201ENST00000362011 MANSC4A6NHS7 340 aaPredicted RBP23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms