RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 BCL2L12Q9HB09 334 aa10.17□□□□□ -0.78
VPS13A-203ENST00000360280 SRGAP2BP0DMP2 458 aa10.17□□□□□ -0.78
VPS13A-203ENST00000360280 KRT10P13645 584 aa10.17□□□□□ -0.78
VPS13A-203ENST00000360280 DNM2P50570 870 aa10.17□□□□□ -0.78
VPS13A-203ENST00000360280 SP4Q02446 784 aa10.17□□□□□ -0.78
VPS13A-203ENST00000360280 CCDC159P0C7I6 412 aa10.17□□□□□ -0.78
VPS13A-203ENST00000360280 PDE6CP51160 858 aa10.17□□□□□ -0.78
VPS13A-203ENST00000360280 RAPH1Q70E73 1250 aa10.17□□□□□ -0.78
VPS13A-203ENST00000360280 DNM3Q9UQ16 869 aa10.17□□□□□ -0.78
VPS13A-203ENST00000360280 ABCC5O15440 1437 aa10.17□□□□□ -0.78
VPS13A-203ENST00000360280 LDHBP07195 334 aaKnown RBP10.17□□□□□ -0.78
VPS13A-203ENST00000360280 NPR1P16066 1061 aa10.17□□□□□ -0.78
VPS13A-203ENST00000360280 PRPF38AQ8NAV1 312 aaKnown RBP10.17□□□□□ -0.78
VPS13A-203ENST00000360280 SLF1Q9BQI6 1058 aa10.17□□□□□ -0.78
VPS13A-203ENST00000360280 UPF3AQ9H1J1 476 aaKnown RBP10.17□□□□□ -0.78
VPS13A-203ENST00000360280 ACTR5Q9H9F9 607 aaPredicted RBP10.17□□□□□ -0.78
VPS13A-203ENST00000360280 KPNA2P52292 529 aaKnown RBP10.17□□□□□ -0.78
VPS13A-203ENST00000360280 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.17□□□□□ -0.78
VPS13A-203ENST00000360280 NOP14P78316 857 aaKnown RBP10.17□□□□□ -0.78
VPS13A-203ENST00000360280 SNX1Q13596 522 aa10.17□□□□□ -0.78
VPS13A-203ENST00000360280 ZNF174Q15697 407 aa10.17□□□□□ -0.78
VPS13A-203ENST00000360280 ATG16L1Q676U5 607 aa10.17□□□□□ -0.78
VPS13A-203ENST00000360280 RNF207Q6ZRF8 634 aa10.17□□□□□ -0.78
VPS13A-203ENST00000360280 MYCT1Q8N699 235 aa10.17□□□□□ -0.78
VPS13A-203ENST00000360280 TCP11Q8WWU5 503 aa10.17□□□□□ -0.78
VPS13A-203ENST00000360280 NOP56O00567 594 aaKnown RBP10.17□□□□□ -0.78
VPS13A-203ENST00000360280 NBPF14Q5TI25 921 aa10.17□□□□□ -0.78
VPS13A-203ENST00000360280 MTX1Q13505 466 aa10.17□□□□□ -0.78
VPS13A-203ENST00000360280 FBXL13Q8NEE6 735 aa10.17□□□□□ -0.78
VPS13A-203ENST00000360280 TRIM55Q9BYV6 548 aa10.17□□□□□ -0.78
VPS13A-203ENST00000360280 NOD1Q9Y239 953 aa10.17□□□□□ -0.78
VPS13A-203ENST00000360280 ATP8B1O43520 1251 aa10.17□□□□□ -0.78
VPS13A-203ENST00000360280 NBPF3Q9H094 633 aa10.17□□□□□ -0.78
VPS13A-203ENST00000360280 OATP04181 439 aa10.16□□□□□ -0.78
VPS13A-203ENST00000360280 POLE2P56282 527 aa10.16□□□□□ -0.78
VPS13A-203ENST00000360280 JPH2Q9BR39 696 aaPredicted RBP10.16□□□□□ -0.78
VPS13A-203ENST00000360280 CHMP6Q96FZ7 201 aa10.16□□□□□ -0.78
VPS13A-203ENST00000360280 A0A1B0GW55 424 aa10.16□□□□□ -0.78
VPS13A-203ENST00000360280 DUX4L2P0CJ85 424 aa10.16□□□□□ -0.78
VPS13A-203ENST00000360280 DUX4L3P0CJ86 424 aa10.16□□□□□ -0.78
VPS13A-203ENST00000360280 DUX4L4P0CJ87 422 aa10.16□□□□□ -0.78
VPS13A-203ENST00000360280 DUX4L5P0CJ88 424 aa10.16□□□□□ -0.78
VPS13A-203ENST00000360280 DUX4L6P0CJ89 424 aa10.16□□□□□ -0.78
VPS13A-203ENST00000360280 DUX4L7P0CJ90 424 aa10.16□□□□□ -0.78
VPS13A-203ENST00000360280 RCN2Q14257 317 aa10.16□□□□□ -0.78
VPS13A-203ENST00000360280 DUX4Q9UBX2 424 aa10.16□□□□□ -0.78
VPS13A-203ENST00000360280 EXOC5O00471 708 aa10.16□□□□□ -0.78
VPS13A-203ENST00000360280 RPS6KB1P23443 525 aa10.16□□□□□ -0.78
VPS13A-203ENST00000360280 SRRM1Q8IYB3 904 aaKnown RBP10.16□□□□□ -0.78
VPS13A-203ENST00000360280 KRT82Q9NSB4 513 aa10.16□□□□□ -0.78
VPS13A-203ENST00000360280 AFAP1Q8N556 730 aa10.16□□□□□ -0.78
VPS13A-203ENST00000360280 POLE3Q9NRF9 147 aa10.16□□□□□ -0.78
VPS13A-203ENST00000360280 CAPN9O14815 690 aa10.16□□□□□ -0.78
VPS13A-203ENST00000360280 PDE6AP16499 860 aa10.16□□□□□ -0.78
VPS13A-203ENST00000360280 USHBP1Q8N6Y0 703 aa10.16□□□□□ -0.78
VPS13A-203ENST00000360280 ANGEL1Q9UNK9 670 aaKnown RBP10.16□□□□□ -0.78
VPS13A-203ENST00000360280 SERPINB2P05120 415 aa10.16□□□□□ -0.78
VPS13A-203ENST00000360280 TAF11Q15544 211 aa10.16□□□□□ -0.78
VPS13A-203ENST00000360280 CHST3Q7LGC8 479 aa10.16□□□□□ -0.78
VPS13A-203ENST00000360280 SKA2Q8WVK7 121 aaPredicted RBP10.16□□□□□ -0.78
VPS13A-203ENST00000360280 MEIS3Q99687 375 aa10.16□□□□□ -0.78
VPS13A-203ENST00000360280 GFM2Q969S9 779 aaKnown RBP10.16□□□□□ -0.78
VPS13A-203ENST00000360280 MYO1AQ9UBC5 1043 aa10.16□□□□□ -0.78
VPS13A-203ENST00000360280 IFT88Q13099 833 aa10.16□□□□□ -0.78
VPS13A-203ENST00000360280 ZNF219Q9P2Y4 722 aaPredicted RBP10.16□□□□□ -0.78
VPS13A-203ENST00000360280 GPC4O75487 556 aa10.16□□□□□ -0.78
VPS13A-203ENST00000360280 HP1BP3Q5SSJ5 553 aaPredicted RBP10.16□□□□□ -0.78
VPS13A-203ENST00000360280 CBX8Q9HC52 389 aa10.16□□□□□ -0.78
VPS13A-203ENST00000360280 BZW2Q9Y6E2 419 aaKnown RBP10.16□□□□□ -0.78
VPS13A-203ENST00000360280 ZBBXA8MT70 800 aa10.16□□□□□ -0.78
VPS13A-203ENST00000360280 DCTN3O75935 186 aa10.16□□□□□ -0.78
VPS13A-203ENST00000360280 FGD4Q96M96 766 aa10.16□□□□□ -0.78
VPS13A-203ENST00000360280 ADGBQ8N7X0 1667 aa10.16□□□□□ -0.78
VPS13A-203ENST00000360280 TRPA1O75762 1119 aa10.16□□□□□ -0.78
VPS13A-203ENST00000360280 CD19P15391 556 aa10.16□□□□□ -0.78
VPS13A-203ENST00000360280 CCHCR1Q8TD31 782 aa10.16□□□□□ -0.78
VPS13A-203ENST00000360280 KLHL29Q96CT2 875 aa10.16□□□□□ -0.78
VPS13A-203ENST00000360280 RPRD2Q5VT52 1461 aaKnown RBP10.15□□□□□ -0.78
VPS13A-203ENST00000360280 SPDYE16A6NNV3 312 aaPredicted RBP10.15□□□□□ -0.78
VPS13A-203ENST00000360280 M0QZ92 97 aa10.15□□□□□ -0.78
VPS13A-203ENST00000360280 KRT8P05787 483 aa10.15□□□□□ -0.78
VPS13A-203ENST00000360280 SPDYE2Q495Y8 402 aa10.15□□□□□ -0.78
VPS13A-203ENST00000360280 SKAP1Q86WV1 359 aa10.15□□□□□ -0.78
VPS13A-203ENST00000360280 RTEL1Q9NZ71 1219 aa10.15□□□□□ -0.78
VPS13A-203ENST00000360280 ALDH1L1O75891 902 aa10.15□□□□□ -0.78
VPS13A-203ENST00000360280 DYNC1I2Q13409 638 aaKnown RBP10.15□□□□□ -0.78
VPS13A-203ENST00000360280 LONRF3Q496Y0 759 aa10.15□□□□□ -0.78
VPS13A-203ENST00000360280 NLRP3Q96P20 1036 aa10.15□□□□□ -0.78
VPS13A-203ENST00000360280 TEX12Q9BXU0 123 aa10.15□□□□□ -0.78
VPS13A-203ENST00000360280 NFE2L3Q9Y4A8 694 aa10.15□□□□□ -0.78
VPS13A-203ENST00000360280 KIF1CO43896 1103 aaKnown RBP10.15□□□□□ -0.78
VPS13A-203ENST00000360280 TNNI1P19237 187 aa10.15□□□□□ -0.78
VPS13A-203ENST00000360280 CCT5P48643 541 aa10.15□□□□□ -0.78
VPS13A-203ENST00000360280 RRAGAQ7L523 313 aa10.15□□□□□ -0.78
VPS13A-203ENST00000360280 PDE11AQ9HCR9 933 aa10.15□□□□□ -0.78
VPS13A-203ENST00000360280 TRIML2Q8N7C3 387 aa10.15□□□□□ -0.78
VPS13A-203ENST00000360280 RABGGTAQ92696 567 aa10.15□□□□□ -0.78
VPS13A-203ENST00000360280 GDAP1L1Q96MZ0 367 aa10.15□□□□□ -0.78
VPS13A-203ENST00000360280 GTPBP10A4D1E9 387 aaKnown RBP10.15□□□□□ -0.78
VPS13A-203ENST00000360280 KCNJ18B7U540 433 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms