RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 PPP2R2CQ9Y2T4 447 aa8.6□□□□□ -1.03
C11orf54-202ENST00000354421 SLIT3O75094 1523 aa8.6□□□□□ -1.03
C11orf54-202ENST00000354421 SPEF2Q9C093 1822 aa8.59□□□□□ -1.03
C11orf54-202ENST00000354421 RGPD2P0DJD1 1756 aa8.59□□□□□ -1.03
C11orf54-202ENST00000354421 TMEM265A0A087WTH1 108 aa8.59□□□□□ -1.03
C11orf54-202ENST00000354421 PRAMEF22A3QJZ6 481 aa8.59□□□□□ -1.03
C11orf54-202ENST00000354421 H0YGN5 161 aa8.59□□□□□ -1.03
C11orf54-202ENST00000354421 BIN1O00499 593 aa8.59□□□□□ -1.03
C11orf54-202ENST00000354421 POLR3GO15318 223 aaPredicted RBP8.59□□□□□ -1.03
C11orf54-202ENST00000354421 SASH3O75995 380 aa8.59□□□□□ -1.03
C11orf54-202ENST00000354421 BMP1P13497 986 aa8.59□□□□□ -1.03
C11orf54-202ENST00000354421 LMOD1P29536 600 aaPredicted RBP8.59□□□□□ -1.03
C11orf54-202ENST00000354421 CASQ1P31415 396 aa8.59□□□□□ -1.03
C11orf54-202ENST00000354421 MDM2Q00987 491 aaPredicted RBP8.59□□□□□ -1.03
C11orf54-202ENST00000354421 RAD51AP2Q09MP3 1159 aa8.59□□□□□ -1.03
C11orf54-202ENST00000354421 SMC1AQ14683 1233 aaKnown RBP8.59□□□□□ -1.03
C11orf54-202ENST00000354421 SLC39A14Q15043 492 aa8.59□□□□□ -1.03
C11orf54-202ENST00000354421 TOM1L2Q6ZVM7 507 aa8.59□□□□□ -1.03
C11orf54-202ENST00000354421 ELOA2Q8IYF1 753 aaPredicted RBP8.59□□□□□ -1.03
C11orf54-202ENST00000354421 FBXO18Q8NFZ0 1043 aa8.59□□□□□ -1.03
C11orf54-202ENST00000354421 DPF2Q92785 391 aa8.59□□□□□ -1.03
C11orf54-202ENST00000354421 HLA-CQ95604 372 aa8.59□□□□□ -1.03
C11orf54-202ENST00000354421 SMARCE1Q969G3 411 aa8.59□□□□□ -1.03
C11orf54-202ENST00000354421 EXOC4Q96A65 974 aa8.59□□□□□ -1.03
C11orf54-202ENST00000354421 C8orf76Q96K31 380 aa8.59□□□□□ -1.03
C11orf54-202ENST00000354421 PSMG3-AS1Q96PY0 264 aa8.59□□□□□ -1.03
C11orf54-202ENST00000354421 P2RX7Q99572 595 aaKnown RBP8.59□□□□□ -1.03
C11orf54-202ENST00000354421 FUT8Q9BYC5 575 aa8.59□□□□□ -1.03
C11orf54-202ENST00000354421 PIM2Q9P1W9 311 aa8.59□□□□□ -1.03
C11orf54-202ENST00000354421 MRFAP1Q9Y605 127 aa8.59□□□□□ -1.03
C11orf54-202ENST00000354421 WDR19Q8NEZ3 1342 aa8.58□□□□□ -1.04
C11orf54-202ENST00000354421 KIF13BQ9NQT8 1826 aa8.58□□□□□ -1.04
C11orf54-202ENST00000354421 DHX16O60231 1041 aaKnown RBP8.58□□□□□ -1.04
C11orf54-202ENST00000354421 PPP6R2O75170 966 aa8.58□□□□□ -1.04
C11orf54-202ENST00000354421 CHGBP05060 677 aa8.58□□□□□ -1.04
C11orf54-202ENST00000354421 HSPD1P10809 573 aaKnown RBP8.58□□□□□ -1.04
C11orf54-202ENST00000354421 TOP1P11387 765 aaKnown RBP8.58□□□□□ -1.04
C11orf54-202ENST00000354421 ATP1A3P13637 1013 aa8.58□□□□□ -1.04
C11orf54-202ENST00000354421 KCNA3P22001 575 aa8.58□□□□□ -1.04
C11orf54-202ENST00000354421 PPP2R3AQ06190 1150 aa8.58□□□□□ -1.04
C11orf54-202ENST00000354421 BRD3Q15059 726 aa8.58□□□□□ -1.04
C11orf54-202ENST00000354421 SYNE3Q6ZMZ3 975 aa8.58□□□□□ -1.04
C11orf54-202ENST00000354421 SMIM5Q71RC9 77 aa8.58□□□□□ -1.04
C11orf54-202ENST00000354421 DDX46Q7L014 1031 aaKnown RBP8.58□□□□□ -1.04
C11orf54-202ENST00000354421 KCNH5Q8NCM2 988 aa8.58□□□□□ -1.04
C11orf54-202ENST00000354421 NEK11Q8NG66 645 aa8.58□□□□□ -1.04
C11orf54-202ENST00000354421 AK7Q96M32 723 aa8.58□□□□□ -1.04
C11orf54-202ENST00000354421 UTP14AQ9BVJ6 771 aaKnown RBP8.58□□□□□ -1.04
C11orf54-202ENST00000354421 ARFGAP3Q9NP61 516 aa8.58□□□□□ -1.04
C11orf54-202ENST00000354421 PAG1Q9NWQ8 432 aa8.58□□□□□ -1.04
C11orf54-202ENST00000354421 NAP1L2Q9ULW6 460 aaPredicted RBP8.58□□□□□ -1.04
C11orf54-202ENST00000354421 DDX60Q8IY21 1712 aaKnown RBP8.58□□□□□ -1.04
C11orf54-202ENST00000354421 VCANP13611 3396 aa8.58□□□□□ -1.04
C11orf54-202ENST00000354421 KRTAP9-6A0A140TA67 174 aa8.57□□□□□ -1.04
C11orf54-202ENST00000354421 MAP2K7O14733 419 aa8.57□□□□□ -1.04
C11orf54-202ENST00000354421 IRF6O14896 467 aa8.57□□□□□ -1.04
C11orf54-202ENST00000354421 RNF113AO15541 343 aaKnown RBP8.57□□□□□ -1.04
C11orf54-202ENST00000354421 STX10O60499 249 aa8.57□□□□□ -1.04
C11orf54-202ENST00000354421 SERPINC1P01008 464 aa8.57□□□□□ -1.04
C11orf54-202ENST00000354421 SYKP43405 635 aa8.57□□□□□ -1.04
C11orf54-202ENST00000354421 ST5P78524 1137 aa8.57□□□□□ -1.04
C11orf54-202ENST00000354421 KIF23Q02241 960 aaPredicted RBP8.57□□□□□ -1.04
C11orf54-202ENST00000354421 AIMP1Q12904 312 aaKnown RBP8.57□□□□□ -1.04
C11orf54-202ENST00000354421 TUBB2AQ13885 445 aa8.57□□□□□ -1.04
C11orf54-202ENST00000354421 KRBA2Q6ZNG9 492 aa8.57□□□□□ -1.04
C11orf54-202ENST00000354421 NFATC2IPQ8NCF5 419 aa8.57□□□□□ -1.04
C11orf54-202ENST00000354421 GOLGA5Q8TBA6 731 aa8.57□□□□□ -1.04
C11orf54-202ENST00000354421 XAGE3Q8WTP9 111 aa8.57□□□□□ -1.04
C11orf54-202ENST00000354421 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.57□□□□□ -1.04
C11orf54-202ENST00000354421 GOLGA1Q92805 767 aa8.57□□□□□ -1.04
C11orf54-202ENST00000354421 FMNL2Q96PY5 1086 aa8.57□□□□□ -1.04
C11orf54-202ENST00000354421 MYD88Q99836 296 aa8.57□□□□□ -1.04
C11orf54-202ENST00000354421 TUBB2BQ9BVA1 445 aa8.57□□□□□ -1.04
C11orf54-202ENST00000354421 PARD6BQ9BYG5 372 aa8.57□□□□□ -1.04
C11orf54-202ENST00000354421 CWC15Q9P013 229 aaKnown RBP8.57□□□□□ -1.04
C11orf54-202ENST00000354421 MROH7-TTC4A0A0A0MT08 1334 aa8.57□□□□□ -1.04
C11orf54-202ENST00000354421 MAP3K15Q6ZN16 1313 aa8.57□□□□□ -1.04
C11orf54-202ENST00000354421 C5P01031 1676 aa8.57□□□□□ -1.04
C11orf54-202ENST00000354421 CCDC151A5D8V7 595 aa8.57□□□□□ -1.04
C11orf54-202ENST00000354421 KIF28PB7ZC32 967 aa8.57□□□□□ -1.04
C11orf54-202ENST00000354421 WDHD1O75717 1129 aaPredicted RBP8.57□□□□□ -1.04
C11orf54-202ENST00000354421 TXLNAP40222 546 aa8.57□□□□□ -1.04
C11orf54-202ENST00000354421 CASP7P55210 303 aa8.57□□□□□ -1.04
C11orf54-202ENST00000354421 TUBB4BP68371 445 aa8.57□□□□□ -1.04
C11orf54-202ENST00000354421 RASSF7Q02833 373 aa8.57□□□□□ -1.04
C11orf54-202ENST00000354421 CFAP100Q494V2 611 aa8.57□□□□□ -1.04
C11orf54-202ENST00000354421 CIAPIN1Q6FI81 312 aa8.57□□□□□ -1.04
C11orf54-202ENST00000354421 OTUD7BQ6GQQ9 843 aa8.57□□□□□ -1.04
C11orf54-202ENST00000354421 OLFM4Q6UX06 510 aa8.57□□□□□ -1.04
C11orf54-202ENST00000354421 KRTAP1-3Q8IUG1 177 aa8.57□□□□□ -1.04
C11orf54-202ENST00000354421 HNRNPLLQ8WVV9 542 aaKnown RBP8.57□□□□□ -1.04
C11orf54-202ENST00000354421 BAG1Q99933 345 aaPredicted RBP8.57□□□□□ -1.04
C11orf54-202ENST00000354421 EFCC1Q9HA90 598 aa8.57□□□□□ -1.04
C11orf54-202ENST00000354421 INTS13Q9NVM9 706 aa8.57□□□□□ -1.04
C11orf54-202ENST00000354421 CCNL1Q9UK58 526 aaPredicted RBP8.57□□□□□ -1.04
C11orf54-202ENST00000354421 NDUFB9Q9Y6M9 179 aa8.57□□□□□ -1.04
C11orf54-202ENST00000354421 MAST3O60307 1309 aa8.56□□□□□ -1.04
C11orf54-202ENST00000354421 CACNA1GO43497 2377 aa8.56□□□□□ -1.04
C11orf54-202ENST00000354421 C4AP0C0L4 1744 aa8.56□□□□□ -1.04
C11orf54-202ENST00000354421 C4BP0C0L5 1744 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms