RNA–Protein interactions for RNA: ENST00000341259.6

SH2B3-201, Transcript of SH2B adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2B3, Length 5,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-201ENST00000341259 MAGEA1P43355 309 aa21.45■■□□□ 1.02
SH2B3-201ENST00000341259 PAIP2Q9BPZ3 127 aaKnown RBP21.45■■□□□ 1.02
SH2B3-201ENST00000341259 IVLP07476 585 aa21.45■■□□□ 1.02
SH2B3-201ENST00000341259 PRR16Q569H4 304 aa21.45■■□□□ 1.02
SH2B3-201ENST00000341259 CCDC26Q8TAB7 109 aa21.45■■□□□ 1.02
SH2B3-201ENST00000341259 NSRP1Q9H0G5 558 aaKnown RBP21.45■■□□□ 1.02
SH2B3-201ENST00000341259 USP31Q70CQ4 1352 aa21.44■■□□□ 1.02
SH2B3-201ENST00000341259 GAS7O60861 476 aa21.44■■□□□ 1.02
SH2B3-201ENST00000341259 SERPINB2P05120 415 aa21.44■■□□□ 1.02
SH2B3-201ENST00000341259 SFMBT2Q5VUG0 894 aa21.44■■□□□ 1.02
SH2B3-201ENST00000341259 MCTP2Q6DN12 878 aa21.44■■□□□ 1.02
SH2B3-201ENST00000341259 ATRIPQ8WXE1 791 aa21.44■■□□□ 1.02
SH2B3-201ENST00000341259 CCDC51Q96ER9 411 aa21.44■■□□□ 1.02
SH2B3-201ENST00000341259 SPOPO43791 374 aa21.44■■□□□ 1.02
SH2B3-201ENST00000341259 CAPN2P17655 700 aa21.44■■□□□ 1.02
SH2B3-201ENST00000341259 LONP1P36776 959 aaKnown RBP21.44■■□□□ 1.02
SH2B3-201ENST00000341259 ICA1Q05084 483 aa21.44■■□□□ 1.02
SH2B3-201ENST00000341259 FAM207AQ9NSI2 230 aaPredicted RBP21.44■■□□□ 1.02
SH2B3-201ENST00000341259 KIF4AO95239 1232 aa21.44■■□□□ 1.02
SH2B3-201ENST00000341259 CCDC114Q96M63 670 aa21.44■■□□□ 1.02
SH2B3-201ENST00000341259 TSNARE1Q96NA8 513 aa21.44■■□□□ 1.02
SH2B3-201ENST00000341259 SELENOSQ9BQE4 189 aa21.44■■□□□ 1.02
SH2B3-201ENST00000341259 DDX25Q9UHL0 483 aaKnown RBP21.44■■□□□ 1.02
SH2B3-201ENST00000341259 ELF2Q15723 593 aa21.44■■□□□ 1.02
SH2B3-201ENST00000341259 HLFQ16534 295 aa21.44■■□□□ 1.02
SH2B3-201ENST00000341259 CSRNP2Q9H175 543 aa21.44■■□□□ 1.02
SH2B3-201ENST00000341259 FANCLQ9NW38 375 aa21.44■■□□□ 1.02
SH2B3-201ENST00000341259 RSPH14Q9UHP6 348 aa21.44■■□□□ 1.02
SH2B3-201ENST00000341259 THRAP3Q9Y2W1 955 aaKnown RBP21.44■■□□□ 1.02
SH2B3-201ENST00000341259 PPP1R14CQ8TAE6 165 aa21.43■■□□□ 1.02
SH2B3-201ENST00000341259 MRFAP1L1Q96HT8 127 aa21.43■■□□□ 1.02
SH2B3-201ENST00000341259 QTRT2Q9H974 415 aaKnown RBP21.43■■□□□ 1.02
SH2B3-201ENST00000341259 GNA14O95837 355 aa21.43■■□□□ 1.02
SH2B3-201ENST00000341259 U2AF2P26368 475 aaKnown RBP eCLIP21.43■■□□□ 1.023e-6■■■■■ 26.9
SH2B3-201ENST00000341259 KIF23Q02241 960 aaPredicted RBP21.43■■□□□ 1.02
SH2B3-201ENST00000341259 KLHL30Q0D2K2 578 aa21.43■■□□□ 1.02
SH2B3-201ENST00000341259 FAM182BQ5T319 152 aa21.43■■□□□ 1.02
SH2B3-201ENST00000341259 CFAP58Q5T655 872 aa21.43■■□□□ 1.02
SH2B3-201ENST00000341259 C8orf74Q6P047 294 aa21.43■■□□□ 1.02
SH2B3-201ENST00000341259 FNBP4Q8N3X1 1017 aaPredicted RBP21.43■■□□□ 1.02
SH2B3-201ENST00000341259 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.43■■□□□ 1.02
SH2B3-201ENST00000341259 PCDHA12Q9UN75 941 aa21.43■■□□□ 1.02
SH2B3-201ENST00000341259 NRKQ7Z2Y5 1582 aa21.43■■□□□ 1.02
SH2B3-201ENST00000341259 RASGRF1Q13972 1273 aa21.43■■□□□ 1.02
SH2B3-201ENST00000341259 IQCDQ96DY2 449 aa21.43■■□□□ 1.02
SH2B3-201ENST00000341259 NAP1L3Q99457 506 aaPredicted RBP21.43■■□□□ 1.02
SH2B3-201ENST00000341259 RPN1P04843 607 aaKnown RBP21.43■■□□□ 1.02
SH2B3-201ENST00000341259 MYOCDQ8IZQ8 938 aa21.43■■□□□ 1.02
SH2B3-201ENST00000341259 TMEM87AQ8NBN3 555 aa21.43■■□□□ 1.02
SH2B3-201ENST00000341259 PALLDQ8WX93 1383 aa21.43■■□□□ 1.02
SH2B3-201ENST00000341259 CCDC25Q86WR0 208 aa21.42■■□□□ 1.02
SH2B3-201ENST00000341259 IQCGQ9H095 443 aaKnown RBP21.42■■□□□ 1.02
SH2B3-201ENST00000341259 SMIM23A6NLE4 172 aa21.42■■□□□ 1.02
SH2B3-201ENST00000341259 ATP2C2O75185 946 aa21.42■■□□□ 1.02
SH2B3-201ENST00000341259 RNASE9P60153 205 aaKnown RBP21.42■■□□□ 1.02
SH2B3-201ENST00000341259 CALCOCO2Q13137 446 aa21.42■■□□□ 1.02
SH2B3-201ENST00000341259 RRAGAQ7L523 313 aa21.42■■□□□ 1.02
SH2B3-201ENST00000341259 SLFN12Q8IYM2 578 aa21.42■■□□□ 1.02
SH2B3-201ENST00000341259 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.42■■□□□ 1.02
SH2B3-201ENST00000341259 NOP56O00567 594 aaKnown RBP21.42■■□□□ 1.02
SH2B3-201ENST00000341259 SLFN13Q68D06 897 aa21.42■■□□□ 1.02
SH2B3-201ENST00000341259 NBPF11Q86T75 865 aa21.42■■□□□ 1.02
SH2B3-201ENST00000341259 FBXO11Q86XK2 927 aa21.42■■□□□ 1.02
SH2B3-201ENST00000341259 TYW1BQ6NUM6 668 aa21.42■■□□□ 1.02
SH2B3-201ENST00000341259 UTP14CQ5TAP6 766 aaKnown RBP21.42■■□□□ 1.02
SH2B3-201ENST00000341259 MIER3Q7Z3K6 550 aa21.42■■□□□ 1.02
SH2B3-201ENST00000341259 APBB1IPQ7Z5R6 666 aaPredicted RBP21.42■■□□□ 1.02
SH2B3-201ENST00000341259 CNKSR1Q969H4 720 aa21.42■■□□□ 1.02
SH2B3-201ENST00000341259 PCDHA4Q9UN74 947 aa21.42■■□□□ 1.02
SH2B3-201ENST00000341259 BAG6P46379 1132 aa21.41■■□□□ 1.02
SH2B3-201ENST00000341259 UBLCP1Q8WVY7 318 aaPredicted RBP21.41■■□□□ 1.02
SH2B3-201ENST00000341259 FTOQ9C0B1 505 aaKnown RBP eCLIP21.41■■□□□ 1.02
SH2B3-201ENST00000341259 POLR2MP0CAP2 368 aa21.41■■□□□ 1.02
SH2B3-201ENST00000341259 MCAMP43121 646 aa21.41■■□□□ 1.02
SH2B3-201ENST00000341259 LRMPQ12912 555 aa21.41■■□□□ 1.02
SH2B3-201ENST00000341259 LSM14BQ9BX40 385 aaKnown RBP21.41■■□□□ 1.02
SH2B3-201ENST00000341259 NUCKS1Q9H1E3 243 aaKnown RBP21.41■■□□□ 1.02
SH2B3-201ENST00000341259 SOS2Q07890 1332 aaPredicted RBP21.41■■□□□ 1.02
SH2B3-201ENST00000341259 TNFAIP1Q13829 316 aa21.4■■□□□ 1.02
SH2B3-201ENST00000341259 DNAJC21Q5F1R6 531 aaKnown RBP21.4■■□□□ 1.02
SH2B3-201ENST00000341259 SRP68Q9UHB9 627 aaKnown RBP21.4■■□□□ 1.02
SH2B3-201ENST00000341259 STX10O60499 249 aa21.4■■□□□ 1.02
SH2B3-201ENST00000341259 TRPC3Q13507 836 aa21.4■■□□□ 1.02
SH2B3-201ENST00000341259 SPATA1Q5VX52 437 aa21.4■■□□□ 1.02
SH2B3-201ENST00000341259 ZSWIM5Q9P217 1185 aa21.4■■□□□ 1.02
SH2B3-201ENST00000341259 TNS3Q68CZ2 1445 aa21.4■■□□□ 1.02
SH2B3-201ENST00000341259 TRIM37O94972 964 aa21.4■■□□□ 1.02
SH2B3-201ENST00000341259 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.4■■□□□ 1.02
SH2B3-201ENST00000341259 NLRC4Q9NPP4 1024 aa21.4■■□□□ 1.02
SH2B3-201ENST00000341259 PANK4Q9NVE7 773 aa21.4■■□□□ 1.02
SH2B3-201ENST00000341259 SWAP70Q9UH65 585 aa21.4■■□□□ 1.02
SH2B3-201ENST00000341259 LRRC8AQ8IWT6 810 aa21.4■■□□□ 1.02
SH2B3-201ENST00000341259 MRPL11Q9Y3B7 192 aaKnown RBP21.4■■□□□ 1.02
SH2B3-201ENST00000341259 TLDC2A0PJX2 215 aa21.39■■□□□ 1.02
SH2B3-201ENST00000341259 MMP1P03956 469 aa21.39■■□□□ 1.02
SH2B3-201ENST00000341259 TRAPPC10P48553 1259 aa21.39■■□□□ 1.02
SH2B3-201ENST00000341259 H7C1D1 291 aa21.39■■□□□ 1.02
SH2B3-201ENST00000341259 BBOX1O75936 387 aa21.39■■□□□ 1.02
SH2B3-201ENST00000341259 LIN9Q5TKA1 542 aa21.39■■□□□ 1.02
SH2B3-201ENST00000341259 TMC4Q7Z404 712 aa21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms