RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 SLF1Q9BQI6 1058 aa22.62■■□□□ 1.21
SYNE4-202ENST00000340477 ESYT1Q9BSJ8 1104 aa22.62■■□□□ 1.21
SYNE4-202ENST00000340477 TCP11L1Q9NUJ3 509 aa22.62■■□□□ 1.21
SYNE4-202ENST00000340477 CTDP1Q9Y5B0 961 aaPredicted RBP22.62■■□□□ 1.21
SYNE4-202ENST00000340477 TACC3Q9Y6A5 838 aa22.62■■□□□ 1.21
SYNE4-202ENST00000340477 RLFQ13129 1914 aa22.62■■□□□ 1.21
SYNE4-202ENST00000340477 NMT2O60551 498 aa22.61■■□□□ 1.21
SYNE4-202ENST00000340477 ATG4CQ96DT6 458 aa22.61■■□□□ 1.21
SYNE4-202ENST00000340477 NUP88Q99567 741 aaPredicted RBP22.61■■□□□ 1.21
SYNE4-202ENST00000340477 IL17RBQ9NRM6 502 aa22.61■■□□□ 1.21
SYNE4-202ENST00000340477 PPP1R9AQ9ULJ8 1098 aa22.61■■□□□ 1.21
SYNE4-202ENST00000340477 KDM4AO75164 1064 aa22.6■■□□□ 1.21
SYNE4-202ENST00000340477 TOP1P11387 765 aaKnown RBP22.6■■□□□ 1.21
SYNE4-202ENST00000340477 BMP3P12645 472 aa22.6■■□□□ 1.21
SYNE4-202ENST00000340477 SLC1A4P43007 532 aa22.6■■□□□ 1.21
SYNE4-202ENST00000340477 PTH1RQ03431 593 aa22.6■■□□□ 1.21
SYNE4-202ENST00000340477 IKQ13123 557 aaPredicted RBP22.6■■□□□ 1.21
SYNE4-202ENST00000340477 PLS1Q14651 629 aa22.6■■□□□ 1.21
SYNE4-202ENST00000340477 SLAIN1Q8ND83 568 aa22.6■■□□□ 1.21
SYNE4-202ENST00000340477 SOCS4Q8WXH5 440 aa22.6■■□□□ 1.21
SYNE4-202ENST00000340477 FEM1BQ9UK73 627 aa22.6■■□□□ 1.21
SYNE4-202ENST00000340477 IVNS1ABPQ9Y6Y0 642 aa22.6■■□□□ 1.21
SYNE4-202ENST00000340477 COL11A1P12107 1806 aaPredicted RBP22.59■■□□□ 1.21
SYNE4-202ENST00000340477 B4E1Z4 1266 aa22.59■■□□□ 1.21
SYNE4-202ENST00000340477 CNMDO75829 334 aa22.59■■□□□ 1.21
SYNE4-202ENST00000340477 FLT3LGP49771 235 aa22.59■■□□□ 1.21
SYNE4-202ENST00000340477 PLEKHH3Q7Z736 793 aa22.59■■□□□ 1.21
SYNE4-202ENST00000340477 RALYLQ86SE5 291 aaKnown RBP22.59■■□□□ 1.21
SYNE4-202ENST00000340477 GMCL1Q96IK5 515 aa22.59■■□□□ 1.21
SYNE4-202ENST00000340477 TTC14Q96N46 770 aa22.59■■□□□ 1.21
SYNE4-202ENST00000340477 SPATC1LQ9H0A9 340 aa22.59■■□□□ 1.21
SYNE4-202ENST00000340477 ANO2Q9NQ90 1003 aa22.59■■□□□ 1.21
SYNE4-202ENST00000340477 FBXO28Q9NVF7 368 aa22.59■■□□□ 1.21
SYNE4-202ENST00000340477 BTBD7Q9P203 1132 aa22.59■■□□□ 1.21
SYNE4-202ENST00000340477 BIN2Q9UBW5 565 aaPredicted RBP22.59■■□□□ 1.21
SYNE4-202ENST00000340477 PEX10O60683 326 aa22.58■■□□□ 1.21
SYNE4-202ENST00000340477 GRK4P32298 578 aa22.58■■□□□ 1.21
SYNE4-202ENST00000340477 IRF5Q13568 498 aa22.58■■□□□ 1.21
SYNE4-202ENST00000340477 Q3C1V9 767 aa22.58■■□□□ 1.21
SYNE4-202ENST00000340477 GPR142Q7Z601 462 aa22.58■■□□□ 1.21
SYNE4-202ENST00000340477 PRPF38AQ8NAV1 312 aaKnown RBP22.58■■□□□ 1.21
SYNE4-202ENST00000340477 MAP4K1Q92918 833 aa22.58■■□□□ 1.21
SYNE4-202ENST00000340477 ARMC5Q96C12 935 aa22.58■■□□□ 1.21
SYNE4-202ENST00000340477 NUDT12Q9BQG2 462 aa22.58■■□□□ 1.21
SYNE4-202ENST00000340477 UBAC1Q9BSL1 405 aa22.58■■□□□ 1.21
SYNE4-202ENST00000340477 PORCNQ9H237 461 aa22.58■■□□□ 1.21
SYNE4-202ENST00000340477 GABRQQ9UN88 632 aa22.58■■□□□ 1.21
SYNE4-202ENST00000340477 MTMR7Q9Y216 660 aa22.58■■□□□ 1.21
SYNE4-202ENST00000340477 RBM8AQ9Y5S9 174 aaKnown RBP22.58■■□□□ 1.21
SYNE4-202ENST00000340477 DOCK3Q8IZD9 2030 aa22.58■■□□□ 1.2
SYNE4-202ENST00000340477 COPB2P35606 906 aa22.57■■□□□ 1.2
SYNE4-202ENST00000340477 CCDC96Q2M329 555 aa22.57■■□□□ 1.2
SYNE4-202ENST00000340477 CHURC1Q8WUH1 139 aa22.57■■□□□ 1.2
SYNE4-202ENST00000340477 DCAF4Q8WV16 495 aa22.57■■□□□ 1.2
SYNE4-202ENST00000340477 PLXNB2O15031 1838 aa22.57■■□□□ 1.2
SYNE4-202ENST00000340477 VWA5AO00534 786 aa22.56■■□□□ 1.2
SYNE4-202ENST00000340477 ADCY3O60266 1144 aa22.56■■□□□ 1.2
SYNE4-202ENST00000340477 ZBED4O75132 1171 aa22.56■■□□□ 1.2
SYNE4-202ENST00000340477 CYP21A2P08686 494 aa22.56■■□□□ 1.2
SYNE4-202ENST00000340477 MCCP23508 829 aa22.56■■□□□ 1.2
SYNE4-202ENST00000340477 NOVP48745 357 aa22.56■■□□□ 1.2
SYNE4-202ENST00000340477 STAT2P52630 851 aa22.56■■□□□ 1.2
SYNE4-202ENST00000340477 UBXN2AP68543 259 aa22.56■■□□□ 1.2
SYNE4-202ENST00000340477 FAM160B2Q86V87 743 aa22.56■■□□□ 1.2
SYNE4-202ENST00000340477 DGKHQ86XP1 1220 aa22.56■■□□□ 1.2
SYNE4-202ENST00000340477 SHCBP1Q8NEM2 672 aa22.56■■□□□ 1.2
SYNE4-202ENST00000340477 SH3TC2Q8TF17 1288 aa22.56■■□□□ 1.2
SYNE4-202ENST00000340477 KIFC2Q96AC6 838 aa22.56■■□□□ 1.2
SYNE4-202ENST00000340477 TMEM47Q9BQJ4 181 aa22.56■■□□□ 1.2
SYNE4-202ENST00000340477 MROH8Q9H579 483 aa22.56■■□□□ 1.2
SYNE4-202ENST00000340477 TMEM232C9JQI7 657 aa22.55■■□□□ 1.2
SYNE4-202ENST00000340477 SLC25A27O95847 323 aa22.55■■□□□ 1.2
SYNE4-202ENST00000340477 RGS2P41220 211 aa22.55■■□□□ 1.2
SYNE4-202ENST00000340477 POTEEQ6S8J3 1075 aa22.55■■□□□ 1.2
SYNE4-202ENST00000340477 NCAPG2Q86XI2 1143 aa22.55■■□□□ 1.2
SYNE4-202ENST00000340477 PXYLP1Q8TE99 480 aa22.55■■□□□ 1.2
SYNE4-202ENST00000340477 ZSCAN10Q96SZ4 725 aaPredicted RBP22.55■■□□□ 1.2
SYNE4-202ENST00000340477 ZKSCAN3Q9BRR0 538 aa22.55■■□□□ 1.2
SYNE4-202ENST00000340477 MOV10L1Q9BXT6 1211 aaKnown RBP22.55■■□□□ 1.2
SYNE4-202ENST00000340477 LSG1Q9H089 658 aaKnown RBP22.55■■□□□ 1.2
SYNE4-202ENST00000340477 KAT14Q9H8E8 782 aa22.55■■□□□ 1.2
SYNE4-202ENST00000340477 FDX1P10109 184 aa22.54■■□□□ 1.2
SYNE4-202ENST00000340477 RNF20Q5VTR2 975 aa22.54■■□□□ 1.2
SYNE4-202ENST00000340477 RCSD1Q6JBY9 416 aa22.54■■□□□ 1.2
SYNE4-202ENST00000340477 TRMT44Q8IYL2 757 aaKnown RBP22.54■■□□□ 1.2
SYNE4-202ENST00000340477 NCOA7Q8NI08 942 aa22.54■■□□□ 1.2
SYNE4-202ENST00000340477 CHMP4CQ96CF2 233 aa22.54■■□□□ 1.2
SYNE4-202ENST00000340477 ZNF333Q96JL9 665 aa22.54■■□□□ 1.2
SYNE4-202ENST00000340477 TMEM106CQ9BVX2 250 aa22.54■■□□□ 1.2
SYNE4-202ENST00000340477 ADAMTS5Q9UNA0 930 aa22.54■■□□□ 1.2
SYNE4-202ENST00000340477 TNKSO95271 1327 aa22.54■■□□□ 1.2
SYNE4-202ENST00000340477 ERICH2A1L162 156 aa22.53■■□□□ 1.2
SYNE4-202ENST00000340477 SLC15A5A6NIM6 579 aa22.53■■□□□ 1.2
SYNE4-202ENST00000340477 ERCC3P19447 782 aa22.53■■□□□ 1.2
SYNE4-202ENST00000340477 TMEM132BQ14DG7 1078 aa22.53■■□□□ 1.2
SYNE4-202ENST00000340477 SART3Q15020 963 aaKnown RBP22.53■■□□□ 1.2
SYNE4-202ENST00000340477 KCTD1Q719H9 257 aa22.53■■□□□ 1.2
SYNE4-202ENST00000340477 TEX13BQ9BXU2 312 aa22.53■■□□□ 1.2
SYNE4-202ENST00000340477 ZSWIM5Q9P217 1185 aa22.53■■□□□ 1.2
SYNE4-202ENST00000340477 ZNF236Q9UL36 1845 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms