RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 WDR46O15213 610 aaKnown RBP20.85■□□□□ 0.93
SDCBP2-201ENST00000339987 SLC10A3P09131 477 aa20.85■□□□□ 0.93
SDCBP2-201ENST00000339987 PARP1P09874 1014 aaKnown RBP20.85■□□□□ 0.93
SDCBP2-201ENST00000339987 SLC1A4P43007 532 aa20.85■□□□□ 0.93
SDCBP2-201ENST00000339987 ZNF543Q08ER8 600 aa20.85■□□□□ 0.93
SDCBP2-201ENST00000339987 GTF3C6Q969F1 213 aa20.85■□□□□ 0.93
SDCBP2-201ENST00000339987 CCDC102AQ96A19 550 aa20.85■□□□□ 0.93
SDCBP2-201ENST00000339987 CHMP4CQ96CF2 233 aa20.85■□□□□ 0.93
SDCBP2-201ENST00000339987 FAM217BQ9NTX9 383 aaPredicted RBP20.85■□□□□ 0.93
SDCBP2-201ENST00000339987 MTMR7Q9Y216 660 aa20.85■□□□□ 0.93
SDCBP2-201ENST00000339987 CCDC196A0A1B0GTZ2 297 aa20.84■□□□□ 0.93
SDCBP2-201ENST00000339987 RAD21O60216 631 aa20.84■□□□□ 0.93
SDCBP2-201ENST00000339987 BMP3P12645 472 aa20.84■□□□□ 0.93
SDCBP2-201ENST00000339987 GNAQP50148 359 aa20.84■□□□□ 0.93
SDCBP2-201ENST00000339987 GTF2A2P52657 109 aa20.84■□□□□ 0.93
SDCBP2-201ENST00000339987 SCRN1Q12765 414 aa20.84■□□□□ 0.93
SDCBP2-201ENST00000339987 STK3Q13188 491 aa20.84■□□□□ 0.93
SDCBP2-201ENST00000339987 RASGRP2Q7LDG7 609 aa20.84■□□□□ 0.93
SDCBP2-201ENST00000339987 SPICE1Q8N0Z3 855 aa20.84■□□□□ 0.93
SDCBP2-201ENST00000339987 PROCA1Q8NCQ7 364 aaPredicted RBP20.84■□□□□ 0.93
SDCBP2-201ENST00000339987 MAD2L2Q9UI95 211 aa20.84■□□□□ 0.93
SDCBP2-201ENST00000339987 VCAM1P19320 739 aa20.83■□□□□ 0.93
SDCBP2-201ENST00000339987 CCT2P78371 535 aaKnown RBP20.83■□□□□ 0.93
SDCBP2-201ENST00000339987 BECN1Q14457 450 aa20.83■□□□□ 0.93
SDCBP2-201ENST00000339987 CCDC96Q2M329 555 aa20.83■□□□□ 0.93
SDCBP2-201ENST00000339987 CCDC144CPQ8IYA2 1237 aa20.83■□□□□ 0.93
SDCBP2-201ENST00000339987 LZTS2Q9BRK4 669 aa20.83■□□□□ 0.93
SDCBP2-201ENST00000339987 RASSF10A6NK89 507 aa20.82■□□□□ 0.92
SDCBP2-201ENST00000339987 DHX16O60231 1041 aaKnown RBP20.82■□□□□ 0.92
SDCBP2-201ENST00000339987 CETPP11597 493 aa20.82■□□□□ 0.92
SDCBP2-201ENST00000339987 CDC27P30260 824 aa20.82■□□□□ 0.92
SDCBP2-201ENST00000339987 ST3GAL1Q11201 340 aa20.82■□□□□ 0.92
SDCBP2-201ENST00000339987 DGKZQ13574 1117 aa20.82■□□□□ 0.92
SDCBP2-201ENST00000339987 MOGSQ13724 837 aa20.82■□□□□ 0.92
SDCBP2-201ENST00000339987 FAM83BQ5T0W9 1011 aa20.82■□□□□ 0.92
SDCBP2-201ENST00000339987 TMTC3Q6ZXV5 915 aa20.82■□□□□ 0.92
SDCBP2-201ENST00000339987 FASTKD5Q7L8L6 764 aaKnown RBP20.82■□□□□ 0.92
SDCBP2-201ENST00000339987 NECAB1Q8N987 351 aa20.82■□□□□ 0.92
SDCBP2-201ENST00000339987 MS4A4AQ96JQ5 239 aa20.82■□□□□ 0.92
SDCBP2-201ENST00000339987 NCOA5Q9HCD5 579 aaKnown RBP20.82■□□□□ 0.92
SDCBP2-201ENST00000339987 FAM155AB1AL88 458 aaPredicted RBP20.81■□□□□ 0.92
SDCBP2-201ENST00000339987 PLA2G6O60733 806 aa20.81■□□□□ 0.92
SDCBP2-201ENST00000339987 SMARCA1P28370 1054 aa20.81■□□□□ 0.92
SDCBP2-201ENST00000339987 CUL4AQ13619 759 aa20.81■□□□□ 0.92
SDCBP2-201ENST00000339987 STAG2Q8N3U4 1231 aa20.81■□□□□ 0.92
SDCBP2-201ENST00000339987 NUP88Q99567 741 aaPredicted RBP20.81■□□□□ 0.92
SDCBP2-201ENST00000339987 FRMPD2Q68DX3 1309 aaPredicted RBP20.81■□□□□ 0.92
SDCBP2-201ENST00000339987 KLRF2D3W0D1 207 aa20.8■□□□□ 0.92
SDCBP2-201ENST00000339987 GOLGA8HP0CJ92 632 aa20.8■□□□□ 0.92
SDCBP2-201ENST00000339987 ADD1P35611 737 aaKnown RBP20.8■□□□□ 0.92
SDCBP2-201ENST00000339987 BTNL9Q6UXG8 535 aa20.8■□□□□ 0.92
SDCBP2-201ENST00000339987 GADL1Q6ZQY3 521 aa20.8■□□□□ 0.92
SDCBP2-201ENST00000339987 KCTD1Q719H9 257 aa20.8■□□□□ 0.92
SDCBP2-201ENST00000339987 CCDC83Q8IWF9 413 aa20.8■□□□□ 0.92
SDCBP2-201ENST00000339987 RPAP3Q9H6T3 665 aaPredicted RBP20.8■□□□□ 0.92
SDCBP2-201ENST00000339987 GPCPD1Q9NPB8 672 aa20.8■□□□□ 0.92
SDCBP2-201ENST00000339987 TESPA1A2RU30 521 aaPredicted RBP20.79■□□□□ 0.92
SDCBP2-201ENST00000339987 MANSC4A6NHS7 340 aaPredicted RBP20.79■□□□□ 0.92
SDCBP2-201ENST00000339987 TMEM232C9JQI7 657 aa20.79■□□□□ 0.92
SDCBP2-201ENST00000339987 PLEKHA8P1O95397 391 aa20.79■□□□□ 0.92
SDCBP2-201ENST00000339987 MKRN3Q13064 507 aaKnown RBP20.79■□□□□ 0.92
SDCBP2-201ENST00000339987 NTRK3Q16288 839 aa20.79■□□□□ 0.92
SDCBP2-201ENST00000339987 DEFB115Q30KQ5 88 aa20.79■□□□□ 0.92
SDCBP2-201ENST00000339987 CPLX2Q6PUV4 134 aaKnown RBP20.79■□□□□ 0.92
SDCBP2-201ENST00000339987 FAM160B2Q86V87 743 aa20.79■□□□□ 0.92
SDCBP2-201ENST00000339987 LLPHQ9BRT6 129 aaKnown RBP20.79■□□□□ 0.92
SDCBP2-201ENST00000339987 FEM1BQ9UK73 627 aa20.79■□□□□ 0.92
SDCBP2-201ENST00000339987 AGTPBP1Q9UPW5 1226 aa20.79■□□□□ 0.92
SDCBP2-201ENST00000339987 CCL15-CCL14A0A0B4J2E2 113 aa20.78■□□□□ 0.92
SDCBP2-201ENST00000339987 USP17L15C9J2P7 530 aa20.78■□□□□ 0.92
SDCBP2-201ENST00000339987 USP17L13C9JLJ4 530 aa20.78■□□□□ 0.92
SDCBP2-201ENST00000339987 USP17L11C9JVI0 530 aa20.78■□□□□ 0.92
SDCBP2-201ENST00000339987 USP17L18D6R9N7 530 aa20.78■□□□□ 0.92
SDCBP2-201ENST00000339987 USP17L22D6RA61 530 aa20.78■□□□□ 0.92
SDCBP2-201ENST00000339987 USP17L17D6RBQ6 530 aa20.78■□□□□ 0.92
SDCBP2-201ENST00000339987 USP17L19D6RCP7 530 aa20.78■□□□□ 0.92
SDCBP2-201ENST00000339987 USP17L20D6RJB6 530 aa20.78■□□□□ 0.92
SDCBP2-201ENST00000339987 CPLX1O14810 134 aa20.78■□□□□ 0.92
SDCBP2-201ENST00000339987 CDKL5O76039 1030 aa20.78■□□□□ 0.92
SDCBP2-201ENST00000339987 IFNAR1P17181 557 aa20.78■□□□□ 0.92
SDCBP2-201ENST00000339987 HOXA7P31268 230 aaPredicted RBP20.78■□□□□ 0.92
SDCBP2-201ENST00000339987 STAT2P52630 851 aa20.78■□□□□ 0.92
SDCBP2-201ENST00000339987 USP17L24Q0WX57 530 aa20.78■□□□□ 0.92
SDCBP2-201ENST00000339987 FUT2Q10981 343 aa20.78■□□□□ 0.92
SDCBP2-201ENST00000339987 CCL15Q16663 113 aa20.78■□□□□ 0.92
SDCBP2-201ENST00000339987 TTBK2Q6IQ55 1244 aa20.78■□□□□ 0.92
SDCBP2-201ENST00000339987 CHURC1Q8WUH1 139 aa20.78■□□□□ 0.92
SDCBP2-201ENST00000339987 SPZ1Q9BXG8 430 aa20.78■□□□□ 0.92
SDCBP2-201ENST00000339987 ISY1Q9ULR0 285 aaKnown RBP20.78■□□□□ 0.92
SDCBP2-201ENST00000339987 PABPC4Q13310 644 aaKnown RBP eCLIP20.78■□□□□ 0.92
SDCBP2-201ENST00000339987 TREML2Q5T2D2 321 aa20.78■□□□□ 0.92
SDCBP2-201ENST00000339987 GPAT2Q6NUI2 795 aa20.78■□□□□ 0.92
SDCBP2-201ENST00000339987 CATSPERGQ6ZRH7 1159 aa20.78■□□□□ 0.92
SDCBP2-201ENST00000339987 SRBD1Q8N5C6 995 aaKnown RBP20.78■□□□□ 0.92
SDCBP2-201ENST00000339987 BRI3BPQ8WY22 251 aa20.78■□□□□ 0.92
SDCBP2-201ENST00000339987 TANGO6Q9C0B7 1094 aa20.78■□□□□ 0.92
SDCBP2-201ENST00000339987 CTDNEP1O95476 244 aa20.77■□□□□ 0.91
SDCBP2-201ENST00000339987 SLC35G1Q2M3R5 365 aa20.77■□□□□ 0.91
SDCBP2-201ENST00000339987 CYP4F22Q6NT55 531 aa20.77■□□□□ 0.91
SDCBP2-201ENST00000339987 NSUN7Q8NE18 718 aaKnown RBP20.77■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms