RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 KBTBD13C9JR72 458 aa29.3■■■□□ 2.28
CDKN3-202ENST00000335183 RTP1P59025 263 aa29.3■■■□□ 2.28
CDKN3-202ENST00000335183 PRAMEF19Q5SWL8 479 aa29.3■■■□□ 2.28
CDKN3-202ENST00000335183 CTR9Q6PD62 1173 aa29.3■■■□□ 2.28
CDKN3-202ENST00000335183 ABRAQ8N0Z2 381 aa29.3■■■□□ 2.28
CDKN3-202ENST00000335183 PRKAG2Q9UGJ0 569 aa29.3■■■□□ 2.28
CDKN3-202ENST00000335183 SMCHD1A6NHR9 2005 aa29.3■■■□□ 2.28
CDKN3-202ENST00000335183 LTBP2Q14767 1821 aa29.29■■■□□ 2.28
CDKN3-202ENST00000335183 SEPT4O43236 478 aa29.29■■■□□ 2.28
CDKN3-202ENST00000335183 FCER1AP12319 257 aa29.29■■■□□ 2.28
CDKN3-202ENST00000335183 TMEM132BQ14DG7 1078 aa29.29■■■□□ 2.28
CDKN3-202ENST00000335183 MAML3Q96JK9 1138 aa29.29■■■□□ 2.28
CDKN3-202ENST00000335183 KANSL2Q9H9L4 492 aa29.29■■■□□ 2.28
CDKN3-202ENST00000335183 ATP11BQ9Y2G3 1177 aa29.29■■■□□ 2.28
CDKN3-202ENST00000335183 SLC25A27O95847 323 aa29.28■■■□□ 2.28
CDKN3-202ENST00000335183 GOPCQ9HD26 462 aa29.28■■■□□ 2.28
CDKN3-202ENST00000335183 FBXO28Q9NVF7 368 aa29.28■■■□□ 2.28
CDKN3-202ENST00000335183 C20orf194Q5TEA3 1177 aa29.27■■■□□ 2.28
CDKN3-202ENST00000335183 ARPP21Q9UBL0 812 aaPredicted RBP29.27■■■□□ 2.28
CDKN3-202ENST00000335183 GREB1LQ9C091 1923 aaPredicted RBP29.27■■■□□ 2.28
CDKN3-202ENST00000335183 STK11IPQ8N1F8 1099 aa29.26■■■□□ 2.27
CDKN3-202ENST00000335183 MMP19Q99542 508 aa29.26■■■□□ 2.27
CDKN3-202ENST00000335183 FAM83BQ5T0W9 1011 aa29.25■■■□□ 2.27
CDKN3-202ENST00000335183 SLC39A5Q6ZMH5 540 aa29.25■■■□□ 2.27
CDKN3-202ENST00000335183 MYH4Q9Y623 1939 aa29.25■■■□□ 2.27
CDKN3-202ENST00000335183 PGK2P07205 417 aa29.24■■■□□ 2.27
CDKN3-202ENST00000335183 ECHDC1Q9NTX5 307 aa29.24■■■□□ 2.27
CDKN3-202ENST00000335183 MTMR10Q9NXD2 777 aa29.24■■■□□ 2.27
CDKN3-202ENST00000335183 PPP1R9AQ9ULJ8 1098 aa29.24■■■□□ 2.27
CDKN3-202ENST00000335183 ADAMTS5Q9UNA0 930 aa29.24■■■□□ 2.27
CDKN3-202ENST00000335183 FAM47AQ5JRC9 791 aa29.23■■■□□ 2.27
CDKN3-202ENST00000335183 RIOX2Q8IUF8 465 aa29.23■■■□□ 2.27
CDKN3-202ENST00000335183 STRBPQ96SI9 672 aaKnown RBP29.23■■■□□ 2.27
CDKN3-202ENST00000335183 PRDM5Q9NQX1 630 aaPredicted RBP29.23■■■□□ 2.27
CDKN3-202ENST00000335183 VWA5AO00534 786 aa29.22■■■□□ 2.27
CDKN3-202ENST00000335183 DLL1O00548 723 aa29.22■■■□□ 2.27
CDKN3-202ENST00000335183 STAT3P40763 770 aa29.22■■■□□ 2.27
CDKN3-202ENST00000335183 KCTD2Q14681 263 aa29.22■■■□□ 2.27
CDKN3-202ENST00000335183 LRRC41Q15345 812 aa29.22■■■□□ 2.27
CDKN3-202ENST00000335183 FERMT2Q96AC1 680 aa29.22■■■□□ 2.27
CDKN3-202ENST00000335183 MINDY4BA8MYZ0 360 aa29.21■■■□□ 2.27
CDKN3-202ENST00000335183 ADCYAP1R1P41586 468 aa29.21■■■□□ 2.27
CDKN3-202ENST00000335183 TRIM60Q495X7 471 aa29.21■■■□□ 2.27
CDKN3-202ENST00000335183 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.21■■■□□ 2.27
CDKN3-202ENST00000335183 MKNK2Q9HBH9 465 aa29.21■■■□□ 2.27
CDKN3-202ENST00000335183 STXBP5LQ9Y2K9 1186 aa29.21■■■□□ 2.27
CDKN3-202ENST00000335183 DNAH12Q6ZR08 3092 aa29.2■■■□□ 2.27
CDKN3-202ENST00000335183 ZNF214Q9UL59 606 aaPredicted RBP29.2■■■□□ 2.26
CDKN3-202ENST00000335183 GSG1L2A8MUP6 293 aa29.19■■■□□ 2.26
CDKN3-202ENST00000335183 RASA1P20936 1047 aa29.19■■■□□ 2.26
CDKN3-202ENST00000335183 SBK1Q52WX2 424 aa29.19■■■□□ 2.26
CDKN3-202ENST00000335183 TSHZ3Q63HK5 1081 aa29.19■■■□□ 2.26
CDKN3-202ENST00000335183 KBTBD3Q8NAB2 608 aa29.19■■■□□ 2.26
CDKN3-202ENST00000335183 GPATCH3Q96I76 525 aa29.19■■■□□ 2.26
CDKN3-202ENST00000335183 NUP88Q99567 741 aaPredicted RBP29.19■■■□□ 2.26
CDKN3-202ENST00000335183 TINF2Q9BSI4 451 aa29.19■■■□□ 2.26
CDKN3-202ENST00000335183 XPNPEP3Q9NQH7 507 aa29.19■■■□□ 2.26
CDKN3-202ENST00000335183 RARBP10826 455 aa29.18■■■□□ 2.26
CDKN3-202ENST00000335183 COPB2P35606 906 aa29.18■■■□□ 2.26
CDKN3-202ENST00000335183 REPS2Q8NFH8 660 aa29.18■■■□□ 2.26
CDKN3-202ENST00000335183 APPBP2Q92624 585 aa29.18■■■□□ 2.26
CDKN3-202ENST00000335183 OSBP2Q969R2 916 aa29.18■■■□□ 2.26
CDKN3-202ENST00000335183 NRBP1Q9UHY1 535 aa29.18■■■□□ 2.26
CDKN3-202ENST00000335183 COL6A3P12111 3177 aa29.18■■■□□ 2.26
CDKN3-202ENST00000335183 SNX17Q15036 470 aa29.17■■■□□ 2.26
CDKN3-202ENST00000335183 ZNF792Q3KQV3 632 aa29.17■■■□□ 2.26
CDKN3-202ENST00000335183 SLF1Q9BQI6 1058 aa29.17■■■□□ 2.26
CDKN3-202ENST00000335183 DIS3Q9Y2L1 958 aaKnown RBP29.17■■■□□ 2.26
CDKN3-202ENST00000335183 TAL1P17542 331 aaPredicted RBP29.16■■■□□ 2.26
CDKN3-202ENST00000335183 GIMAP6Q6P9H5 292 aa29.16■■■□□ 2.26
CDKN3-202ENST00000335183 NYAP2Q9P242 653 aa29.16■■■□□ 2.26
CDKN3-202ENST00000335183 ROBO3Q96MS0 1386 aa29.15■■■□□ 2.26
CDKN3-202ENST00000335183 F5H6K3 240 aa29.15■■■□□ 2.26
CDKN3-202ENST00000335183 RNF113AO15541 343 aaKnown RBP29.15■■■□□ 2.26
CDKN3-202ENST00000335183 SLC4A3P48751 1232 aa29.15■■■□□ 2.26
CDKN3-202ENST00000335183 TDO2P48775 406 aa29.15■■■□□ 2.26
CDKN3-202ENST00000335183 KLRC3Q07444 240 aa29.15■■■□□ 2.26
CDKN3-202ENST00000335183 SNRNP48Q6IEG0 339 aaKnown RBP29.15■■■□□ 2.26
CDKN3-202ENST00000335183 BADQ92934 168 aa29.15■■■□□ 2.26
CDKN3-202ENST00000335183 PDLIM7Q9NR12 457 aa29.15■■■□□ 2.26
CDKN3-202ENST00000335183 GPAA1O43292 621 aa29.14■■■□□ 2.26
CDKN3-202ENST00000335183 NDUFB10O96000 172 aa29.14■■■□□ 2.26
CDKN3-202ENST00000335183 PGK1P00558 417 aa29.14■■■□□ 2.26
CDKN3-202ENST00000335183 APPP05067 770 aa29.14■■■□□ 2.26
CDKN3-202ENST00000335183 RNF180Q86T96 592 aa29.14■■■□□ 2.26
CDKN3-202ENST00000335183 FAM161BQ96MY7 647 aa29.14■■■□□ 2.26
CDKN3-202ENST00000335183 TEX13BQ9BXU2 312 aa29.14■■■□□ 2.26
CDKN3-202ENST00000335183 DCTPP1Q9H773 170 aa29.14■■■□□ 2.26
CDKN3-202ENST00000335183 EPB41L4AQ9HCS5 686 aaPredicted RBP29.14■■■□□ 2.26
CDKN3-202ENST00000335183 CLIP2Q9UDT6 1046 aa29.14■■■□□ 2.26
CDKN3-202ENST00000335183 PHF24Q9UPV7 400 aa29.14■■■□□ 2.26
CDKN3-202ENST00000335183 AKR1A1P14550 325 aa29.13■■■□□ 2.25
CDKN3-202ENST00000335183 SHHQ15465 462 aa29.13■■■□□ 2.25
CDKN3-202ENST00000335183 SH3RF1Q7Z6J0 888 aa29.13■■■□□ 2.25
CDKN3-202ENST00000335183 CNPY2Q9Y2B0 182 aa29.13■■■□□ 2.25
CDKN3-202ENST00000335183 POTEB2H3BUK9 544 aa29.12■■■□□ 2.25
CDKN3-202ENST00000335183 M0R2C6 588 aa29.12■■■□□ 2.25
CDKN3-202ENST00000335183 PRDM1O75626 825 aa29.12■■■□□ 2.25
CDKN3-202ENST00000335183 ZFYP08048 801 aaPredicted RBP29.12■■■□□ 2.25
CDKN3-202ENST00000335183 ZNF865P0CJ78 1059 aaPredicted RBP29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms