RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 EPN1Q9Y6I3 576 aaPredicted RBP26.63■■□□□ 1.85
TSKU-201ENST00000333090 SMIM22K7EJ46 135 aa26.62■■□□□ 1.85
TSKU-201ENST00000333090 PDE8AO60658 829 aa26.62■■□□□ 1.85
TSKU-201ENST00000333090 TRIM14Q14142 442 aa26.62■■□□□ 1.85
TSKU-201ENST00000333090 TTC38Q5R3I4 469 aa26.62■■□□□ 1.85
TSKU-201ENST00000333090 WDR93Q6P2C0 686 aa26.62■■□□□ 1.85
TSKU-201ENST00000333090 NELFBQ8WX92 580 aa26.62■■□□□ 1.85
TSKU-201ENST00000333090 MED4Q9NPJ6 270 aa26.62■■□□□ 1.85
TSKU-201ENST00000333090 TIAM2Q8IVF5 1701 aa26.62■■□□□ 1.85
TSKU-201ENST00000333090 NDUFA10O95299 355 aa26.62■■□□□ 1.85
TSKU-201ENST00000333090 PLEKHA8P1O95397 391 aa26.62■■□□□ 1.85
TSKU-201ENST00000333090 SDR42E1Q8WUS8 393 aa26.62■■□□□ 1.85
TSKU-201ENST00000333090 MTA3Q9BTC8 594 aa26.62■■□□□ 1.85
TSKU-201ENST00000333090 REXO2Q9Y3B8 237 aaKnown RBP26.62■■□□□ 1.85
TSKU-201ENST00000333090 BRMS1Q9HCU9 246 aa26.61■■□□□ 1.85
TSKU-201ENST00000333090 MROH5Q6ZUA9 1318 aa26.61■■□□□ 1.85
TSKU-201ENST00000333090 SEC23AQ15436 765 aa26.61■■□□□ 1.85
TSKU-201ENST00000333090 ESR2Q92731 530 aa26.61■■□□□ 1.85
TSKU-201ENST00000333090 PNPLA7Q6ZV29 1317 aa26.61■■□□□ 1.85
TSKU-201ENST00000333090 RTL9Q8NET4 1388 aa26.61■■□□□ 1.85
TSKU-201ENST00000333090 PAPPAQ13219 1627 aa26.61■■□□□ 1.85
TSKU-201ENST00000333090 MYH6P13533 1939 aa26.61■■□□□ 1.85
TSKU-201ENST00000333090 LRP2BPQ9P2M1 347 aa26.6■■□□□ 1.85
TSKU-201ENST00000333090 PES1O00541 588 aaKnown RBP26.6■■□□□ 1.85
TSKU-201ENST00000333090 RPS6KA5O75582 802 aa26.6■■□□□ 1.85
TSKU-201ENST00000333090 E2F4Q16254 413 aa26.6■■□□□ 1.85
TSKU-201ENST00000333090 MTRQ99707 1265 aa26.6■■□□□ 1.85
TSKU-201ENST00000333090 TFR2Q9UP52 801 aa26.6■■□□□ 1.85
TSKU-201ENST00000333090 RNF40O75150 1001 aa26.59■■□□□ 1.85
TSKU-201ENST00000333090 TRAPPC11Q7Z392 1133 aa26.59■■□□□ 1.85
TSKU-201ENST00000333090 ZBTB1Q9Y2K1 713 aa26.59■■□□□ 1.85
TSKU-201ENST00000333090 BCAMP50895 628 aa26.59■■□□□ 1.85
TSKU-201ENST00000333090 GOLGA6L1Q8N7Z2 621 aa26.59■■□□□ 1.85
TSKU-201ENST00000333090 ENAHQ8N8S7 591 aaPredicted RBP26.59■■□□□ 1.85
TSKU-201ENST00000333090 TTC26A0AVF1 554 aa26.59■■□□□ 1.85
TSKU-201ENST00000333090 PRPF3O43395 683 aaKnown RBP26.59■■□□□ 1.85
TSKU-201ENST00000333090 SRGAP2O75044 1071 aa26.59■■□□□ 1.85
TSKU-201ENST00000333090 ATP2C1P98194 919 aaPredicted RBP26.59■■□□□ 1.85
TSKU-201ENST00000333090 FUT2Q10981 343 aa26.59■■□□□ 1.85
TSKU-201ENST00000333090 LRRC31Q6UY01 552 aa26.59■■□□□ 1.85
TSKU-201ENST00000333090 GDAQ9Y2T3 454 aa26.59■■□□□ 1.85
TSKU-201ENST00000333090 BCL9LQ86UU0 1499 aa26.58■■□□□ 1.85
TSKU-201ENST00000333090 PPP2R5BQ15173 497 aa26.58■■□□□ 1.85
TSKU-201ENST00000333090 USP14P54578 494 aa26.58■■□□□ 1.84
TSKU-201ENST00000333090 PDXDC2PQ6P474 469 aa26.58■■□□□ 1.84
TSKU-201ENST00000333090 CAPZA3Q96KX2 299 aa26.58■■□□□ 1.84
TSKU-201ENST00000333090 GDAP1L1Q96MZ0 367 aa26.58■■□□□ 1.84
TSKU-201ENST00000333090 MMS19Q96T76 1030 aa26.58■■□□□ 1.84
TSKU-201ENST00000333090 GTPBP6O43824 516 aaPredicted RBP26.57■■□□□ 1.84
TSKU-201ENST00000333090 ATP1A1P05023 1023 aaKnown RBP26.57■■□□□ 1.84
TSKU-201ENST00000333090 IFIT1BQ5T764 474 aaKnown RBP26.57■■□□□ 1.84
TSKU-201ENST00000333090 CATIPQ7Z7H3 387 aa26.57■■□□□ 1.84
TSKU-201ENST00000333090 PLEKHA4Q9H4M7 779 aa26.57■■□□□ 1.84
TSKU-201ENST00000333090 ZNF658Q5TYW1 1059 aaPredicted RBP26.57■■□□□ 1.84
TSKU-201ENST00000333090 OR8K1Q8NGG5 319 aa26.57■■□□□ 1.84
TSKU-201ENST00000333090 HAUS4Q9H6D7 363 aa26.57■■□□□ 1.84
TSKU-201ENST00000333090 MKRN1Q9UHC7 482 aaKnown RBP26.57■■□□□ 1.84
TSKU-201ENST00000333090 SAR1BQ9Y6B6 198 aa26.57■■□□□ 1.84
TSKU-201ENST00000333090 PSMD14O00487 310 aa26.56■■□□□ 1.84
TSKU-201ENST00000333090 MCM7P33993 719 aa26.56■■□□□ 1.84
TSKU-201ENST00000333090 CCDC122Q5T0U0 273 aa26.56■■□□□ 1.84
TSKU-201ENST00000333090 ZSCAN10Q96SZ4 725 aaPredicted RBP26.56■■□□□ 1.84
TSKU-201ENST00000333090 TOGARAM1Q9Y4F4 1720 aa26.56■■□□□ 1.84
TSKU-201ENST00000333090 CYP7A1P22680 504 aa26.56■■□□□ 1.84
TSKU-201ENST00000333090 PRCPP42785 496 aa26.56■■□□□ 1.84
TSKU-201ENST00000333090 NPY5RQ15761 445 aa26.56■■□□□ 1.84
TSKU-201ENST00000333090 TNFRSF25Q93038 417 aa26.56■■□□□ 1.84
TSKU-201ENST00000333090 IQSEC3Q9UPP2 1182 aaPredicted RBP26.56■■□□□ 1.84
TSKU-201ENST00000333090 LUC7L2Q9Y383 392 aaKnown RBP26.56■■□□□ 1.84
TSKU-201ENST00000333090 TRIM49BA6NDI0 452 aa26.55■■□□□ 1.84
TSKU-201ENST00000333090 ZMYND10O75800 440 aa26.55■■□□□ 1.84
TSKU-201ENST00000333090 SYF2O95926 243 aaKnown RBP26.55■■□□□ 1.84
TSKU-201ENST00000333090 PIK3AP1Q6ZUJ8 805 aa26.55■■□□□ 1.84
TSKU-201ENST00000333090 ANKRD65E5RJM6 399 aa26.55■■□□□ 1.84
TSKU-201ENST00000333090 RPN1P04843 607 aaKnown RBP26.55■■□□□ 1.84
TSKU-201ENST00000333090 ADGRA1Q86SQ6 560 aa26.55■■□□□ 1.84
TSKU-201ENST00000333090 AFAP1L1Q8TED9 768 aa26.55■■□□□ 1.84
TSKU-201ENST00000333090 VIPAS39Q9H9C1 493 aa26.55■■□□□ 1.84
TSKU-201ENST00000333090 BAZ2BQ9UIF8 2168 aaKnown RBP26.55■■□□□ 1.84
TSKU-201ENST00000333090 MYH3P11055 1940 aa26.55■■□□□ 1.84
TSKU-201ENST00000333090 SHANK3Q9BYB0 1731 aa26.55■■□□□ 1.84
TSKU-201ENST00000333090 PARP1P09874 1014 aaKnown RBP26.54■■□□□ 1.84
TSKU-201ENST00000333090 MAP9Q49MG5 647 aa26.54■■□□□ 1.84
TSKU-201ENST00000333090 RIN2Q8WYP3 895 aaPredicted RBP26.54■■□□□ 1.84
TSKU-201ENST00000333090 TSR1Q2NL82 804 aaKnown RBP26.54■■□□□ 1.84
TSKU-201ENST00000333090 PLCD3Q8N3E9 789 aa26.54■■□□□ 1.84
TSKU-201ENST00000333090 CTCFLQ8NI51 663 aaPredicted RBP26.54■■□□□ 1.84
TSKU-201ENST00000333090 EIF3CLB5ME19 914 aaKnown RBP26.53■■□□□ 1.84
TSKU-201ENST00000333090 HERVK_113P62684 666 aa26.53■■□□□ 1.84
TSKU-201ENST00000333090 IL17AQ16552 155 aa26.53■■□□□ 1.84
TSKU-201ENST00000333090 EIF3CQ99613 913 aaKnown RBP26.53■■□□□ 1.84
TSKU-201ENST00000333090 RMND1Q9NWS8 449 aa26.53■■□□□ 1.84
TSKU-201ENST00000333090 ABCF2Q9UG63 623 aa26.53■■□□□ 1.84
TSKU-201ENST00000333090 HPCAL4Q9UM19 191 aa26.53■■□□□ 1.84
TSKU-201ENST00000333090 CYP2D7A0A087X1C5 515 aa26.53■■□□□ 1.84
TSKU-201ENST00000333090 AARSP49588 968 aaKnown RBP eCLIP26.53■■□□□ 1.84
TSKU-201ENST00000333090 IRF2BP1Q8IU81 584 aa26.53■■□□□ 1.84
TSKU-201ENST00000333090 SKIDA1Q1XH10 827 aa26.52■■□□□ 1.84
TSKU-201ENST00000333090 MB21D1Q8N884 522 aa26.52■■□□□ 1.84
TSKU-201ENST00000333090 IPO4Q8TEX9 1081 aaKnown RBP26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms