RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 CDAN1Q8IWY9 1227 aa11.01□□□□□ -0.65
C11orf54-201ENST00000331239 STK11IPQ8N1F8 1099 aa11.01□□□□□ -0.65
C11orf54-201ENST00000331239 NKX2-3Q8TAU0 364 aa11.01□□□□□ -0.65
C11orf54-201ENST00000331239 ZKSCAN3Q9BRR0 538 aa11.01□□□□□ -0.65
C11orf54-201ENST00000331239 RNF26Q9BY78 433 aaPredicted RBP11.01□□□□□ -0.65
C11orf54-201ENST00000331239 GBA2Q9HCG7 927 aaPredicted RBP11.01□□□□□ -0.65
C11orf54-201ENST00000331239 KCNH4Q9UQ05 1017 aa11.01□□□□□ -0.65
C11orf54-201ENST00000331239 CPLX1O14810 134 aa11□□□□□ -0.65
C11orf54-201ENST00000331239 WDR46O15213 610 aaKnown RBP11□□□□□ -0.65
C11orf54-201ENST00000331239 GDF11O95390 407 aa11□□□□□ -0.65
C11orf54-201ENST00000331239 BACE1P56817 501 aa11□□□□□ -0.65
C11orf54-201ENST00000331239 MAP1SQ66K74 1059 aaPredicted RBP11□□□□□ -0.65
C11orf54-201ENST00000331239 FAM160B2Q86V87 743 aa11□□□□□ -0.65
C11orf54-201ENST00000331239 GPT2Q8TD30 523 aa11□□□□□ -0.65
C11orf54-201ENST00000331239 ANP32BQ92688 251 aaKnown RBP11□□□□□ -0.65
C11orf54-201ENST00000331239 TCEANC2Q96MN5 208 aa11□□□□□ -0.65
C11orf54-201ENST00000331239 LRRC2Q9BYS8 371 aa11□□□□□ -0.65
C11orf54-201ENST00000331239 AFG3L2Q9Y4W6 797 aa11□□□□□ -0.65
C11orf54-201ENST00000331239 SNCAIPQ9Y6H5 919 aa11□□□□□ -0.65
C11orf54-201ENST00000331239 MYPNQ86TC9 1320 aa11□□□□□ -0.65
C11orf54-201ENST00000331239 ESPNB1AK53 854 aa11□□□□□ -0.65
C11orf54-201ENST00000331239 PRPF3O43395 683 aaKnown RBP11□□□□□ -0.65
C11orf54-201ENST00000331239 NMT2O60551 498 aa11□□□□□ -0.65
C11orf54-201ENST00000331239 MBD3O95983 291 aa11□□□□□ -0.65
C11orf54-201ENST00000331239 PDHBP11177 359 aa11□□□□□ -0.65
C11orf54-201ENST00000331239 ZNF543Q08ER8 600 aa11□□□□□ -0.65
C11orf54-201ENST00000331239 SCRN1Q12765 414 aa11□□□□□ -0.65
C11orf54-201ENST00000331239 TRIM22Q8IYM9 498 aa11□□□□□ -0.65
C11orf54-201ENST00000331239 CHURC1Q8WUH1 139 aa11□□□□□ -0.65
C11orf54-201ENST00000331239 FAM196BA6NMK8 535 aa10.99□□□□□ -0.65
C11orf54-201ENST00000331239 F5H6K3 240 aa10.99□□□□□ -0.65
C11orf54-201ENST00000331239 ZBTB48P10074 688 aaPredicted RBP10.99□□□□□ -0.65
C11orf54-201ENST00000331239 INPP5BP32019 993 aa10.99□□□□□ -0.65
C11orf54-201ENST00000331239 KLRC3Q07444 240 aa10.99□□□□□ -0.65
C11orf54-201ENST00000331239 COL9A3Q14050 684 aaPredicted RBP10.99□□□□□ -0.65
C11orf54-201ENST00000331239 NTRK3Q16288 839 aa10.99□□□□□ -0.65
C11orf54-201ENST00000331239 SLFN13Q68D06 897 aa10.99□□□□□ -0.65
C11orf54-201ENST00000331239 TMTC3Q6ZXV5 915 aa10.99□□□□□ -0.65
C11orf54-201ENST00000331239 PROCA1Q8NCQ7 364 aaPredicted RBP10.99□□□□□ -0.65
C11orf54-201ENST00000331239 FAM217BQ9NTX9 383 aaPredicted RBP10.99□□□□□ -0.65
C11orf54-201ENST00000331239 FEM1BQ9UK73 627 aa10.99□□□□□ -0.65
C11orf54-201ENST00000331239 SLC45A1Q9Y2W3 748 aa10.99□□□□□ -0.65
C11orf54-201ENST00000331239 LOC285556D6RIA3 1793 aa10.99□□□□□ -0.65
C11orf54-201ENST00000331239 FMNL1O95466 1100 aaPredicted RBP10.99□□□□□ -0.65
C11orf54-201ENST00000331239 VGLL4Q14135 290 aa10.99□□□□□ -0.65
C11orf54-201ENST00000331239 FOXD4L5Q5VV16 416 aaPredicted RBP10.99□□□□□ -0.65
C11orf54-201ENST00000331239 FASTKD5Q7L8L6 764 aaKnown RBP10.99□□□□□ -0.65
C11orf54-201ENST00000331239 FOXD4L4Q8WXT5 416 aaPredicted RBP10.99□□□□□ -0.65
C11orf54-201ENST00000331239 PPP1R9BQ96SB3 815 aa10.99□□□□□ -0.65
C11orf54-201ENST00000331239 RIOX1Q9H6W3 641 aa10.99□□□□□ -0.65
C11orf54-201ENST00000331239 ZCCHC17Q9NP64 241 aaKnown RBP10.99□□□□□ -0.65
C11orf54-201ENST00000331239 GPHNQ9NQX3 736 aaPredicted RBP10.99□□□□□ -0.65
C11orf54-201ENST00000331239 SH3GLB2Q9NR46 395 aa10.99□□□□□ -0.65
C11orf54-201ENST00000331239 MAD2L2Q9UI95 211 aa10.99□□□□□ -0.65
C11orf54-201ENST00000331239 SMC3Q9UQE7 1217 aa10.99□□□□□ -0.65
C11orf54-201ENST00000331239 BMP3P12645 472 aa10.98□□□□□ -0.65
C11orf54-201ENST00000331239 JAG1P78504 1218 aa10.98□□□□□ -0.65
C11orf54-201ENST00000331239 REM2Q8IYK8 340 aaPredicted RBP10.98□□□□□ -0.65
C11orf54-201ENST00000331239 GTF3C2Q8WUA4 911 aaPredicted RBP10.98□□□□□ -0.65
C11orf54-201ENST00000331239 SLC10A4Q96EP9 437 aa10.98□□□□□ -0.65
C11orf54-201ENST00000331239 CHAMP1Q96JM3 812 aa10.98□□□□□ -0.65
C11orf54-201ENST00000331239 PTPRFP10586 1907 aa10.98□□□□□ -0.65
C11orf54-201ENST00000331239 DEXIO95424 95 aa10.98□□□□□ -0.65
C11orf54-201ENST00000331239 SLC1A4P43007 532 aa10.98□□□□□ -0.65
C11orf54-201ENST00000331239 SSRP1Q08945 709 aaKnown RBP10.98□□□□□ -0.65
C11orf54-201ENST00000331239 FUT2Q10981 343 aa10.98□□□□□ -0.65
C11orf54-201ENST00000331239 PABPC4Q13310 644 aaKnown RBP eCLIP10.98□□□□□ -0.65
C11orf54-201ENST00000331239 TTLL12Q14166 644 aaPredicted RBP10.98□□□□□ -0.65
C11orf54-201ENST00000331239 MICU3Q86XE3 530 aa10.98□□□□□ -0.65
C11orf54-201ENST00000331239 NSUN7Q8NE18 718 aaKnown RBP10.98□□□□□ -0.65
C11orf54-201ENST00000331239 MTMR8Q96EF0 704 aa10.98□□□□□ -0.65
C11orf54-201ENST00000331239 GLT8D2Q9H1C3 349 aa10.98□□□□□ -0.65
C11orf54-201ENST00000331239 SENP2Q9HC62 589 aa10.98□□□□□ -0.65
C11orf54-201ENST00000331239 TMOD4Q9NZQ9 345 aa10.98□□□□□ -0.65
C11orf54-201ENST00000331239 MYH6P13533 1939 aa10.98□□□□□ -0.65
C11orf54-201ENST00000331239 A0A0G2JLL6 359 aaPredicted RBP10.97□□□□□ -0.65
C11orf54-201ENST00000331239 CELF2O95319 508 aaKnown RBP10.97□□□□□ -0.65
C11orf54-201ENST00000331239 NDUFB10O96000 172 aa10.97□□□□□ -0.65
C11orf54-201ENST00000331239 POTEIP0CG38 1075 aa10.97□□□□□ -0.65
C11orf54-201ENST00000331239 POTEJP0CG39 1038 aa10.97□□□□□ -0.65
C11orf54-201ENST00000331239 YY1P25490 414 aa10.97□□□□□ -0.65
C11orf54-201ENST00000331239 AKAP17AQ02040 695 aaKnown RBP10.97□□□□□ -0.65
C11orf54-201ENST00000331239 PRAMEF18Q5VWM3 479 aa10.97□□□□□ -0.65
C11orf54-201ENST00000331239 GALNT17Q6IS24 598 aa10.97□□□□□ -0.65
C11orf54-201ENST00000331239 PRRT2Q7Z6L0 340 aaPredicted RBP10.97□□□□□ -0.65
C11orf54-201ENST00000331239 SAMD3Q8N6K7 520 aa10.97□□□□□ -0.65
C11orf54-201ENST00000331239 NUP133Q8WUM0 1156 aa10.97□□□□□ -0.65
C11orf54-201ENST00000331239 CNKSR2Q8WXI2 1034 aa10.97□□□□□ -0.65
C11orf54-201ENST00000331239 ZKSCAN4Q969J2 545 aaPredicted RBP10.97□□□□□ -0.65
C11orf54-201ENST00000331239 ZHX2Q9Y6X8 837 aa10.97□□□□□ -0.65
C11orf54-201ENST00000331239 WDR33Q9C0J8 1336 aaKnown RBP10.97□□□□□ -0.65
C11orf54-201ENST00000331239 A0A1W2PRG0 241 aa10.97□□□□□ -0.65
C11orf54-201ENST00000331239 KLRF2D3W0D1 207 aa10.97□□□□□ -0.65
C11orf54-201ENST00000331239 XBP1P17861 261 aa10.97□□□□□ -0.65
C11orf54-201ENST00000331239 HOXA7P31268 230 aaPredicted RBP10.97□□□□□ -0.65
C11orf54-201ENST00000331239 INHBEP58166 350 aa10.97□□□□□ -0.65
C11orf54-201ENST00000331239 NBPF11Q86T75 865 aa10.97□□□□□ -0.65
C11orf54-201ENST00000331239 CCDC83Q8IWF9 413 aa10.97□□□□□ -0.65
C11orf54-201ENST00000331239 FEZ1Q99689 392 aa10.97□□□□□ -0.65
C11orf54-201ENST00000331239 LARGE1O95461 756 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms