RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 CYP2C19P33261 490 aa17.07■□□□□ 0.32
VARS2-201ENST00000321897 GRIN1Q05586 938 aa17.07■□□□□ 0.32
VARS2-201ENST00000321897 MFSD14BQ5SR56 506 aa17.07■□□□□ 0.32
VARS2-201ENST00000321897 RBM26Q5T8P6 1007 aaKnown RBP17.07■□□□□ 0.32
VARS2-201ENST00000321897 E4F1Q66K89 784 aaPredicted RBP17.07■□□□□ 0.32
VARS2-201ENST00000321897 LRRN4CLQ8ND94 238 aa17.07■□□□□ 0.32
VARS2-201ENST00000321897 MED23Q9ULK4 1368 aa17.07■□□□□ 0.32
VARS2-201ENST00000321897 TRAF5O00463 557 aa17.06■□□□□ 0.32
VARS2-201ENST00000321897 HGSO14964 777 aaPredicted RBP17.06■□□□□ 0.32
VARS2-201ENST00000321897 CASP14P31944 242 aa17.06■□□□□ 0.32
VARS2-201ENST00000321897 IL6STP40189 918 aaPredicted RBP17.06■□□□□ 0.32
VARS2-201ENST00000321897 AMPD3Q01432 767 aa17.06■□□□□ 0.32
VARS2-201ENST00000321897 NAA25Q14CX7 972 aa17.06■□□□□ 0.32
VARS2-201ENST00000321897 USH1GQ495M9 461 aa17.06■□□□□ 0.32
VARS2-201ENST00000321897 CC2D1AQ6P1N0 951 aaPredicted RBP17.06■□□□□ 0.32
VARS2-201ENST00000321897 MYCBPQ99417 103 aaPredicted RBP17.06■□□□□ 0.32
VARS2-201ENST00000321897 NOC4LQ9BVI4 516 aaKnown RBP17.06■□□□□ 0.32
VARS2-201ENST00000321897 RMND1Q9NWS8 449 aa17.06■□□□□ 0.32
VARS2-201ENST00000321897 LOC102724159A0A0B4J2E5 919 aa17.06■□□□□ 0.32
VARS2-201ENST00000321897 A0A1W2PQ27 194 aa17.06■□□□□ 0.32
VARS2-201ENST00000321897 A0A1W2PQ64 194 aa17.06■□□□□ 0.32
VARS2-201ENST00000321897 A0A1W2PQD8 194 aa17.06■□□□□ 0.32
VARS2-201ENST00000321897 FRMD3A2A2Y4 597 aa17.06■□□□□ 0.32
VARS2-201ENST00000321897 WTIPA6NIX2 430 aaPredicted RBP17.06■□□□□ 0.32
VARS2-201ENST00000321897 ANTXR2P58335 489 aa17.06■□□□□ 0.32
VARS2-201ENST00000321897 SP4Q02446 784 aa17.06■□□□□ 0.32
VARS2-201ENST00000321897 PWP2Q15269 919 aaKnown RBP17.06■□□□□ 0.32
VARS2-201ENST00000321897 BMP15O95972 392 aa17.06■□□□□ 0.32
VARS2-201ENST00000321897 CDC25BP30305 580 aa17.06■□□□□ 0.32
VARS2-201ENST00000321897 EXOSC10Q01780 885 aaKnown RBP17.06■□□□□ 0.32
VARS2-201ENST00000321897 KRT79Q5XKE5 535 aa17.06■□□□□ 0.32
VARS2-201ENST00000321897 SLC35F6Q8N357 371 aa17.06■□□□□ 0.32
VARS2-201ENST00000321897 RABGGTAQ92696 567 aa17.06■□□□□ 0.32
VARS2-201ENST00000321897 ISCA1Q9BUE6 129 aa17.06■□□□□ 0.32
VARS2-201ENST00000321897 MAN1B1Q9UKM7 699 aa17.06■□□□□ 0.32
VARS2-201ENST00000321897 SOWAHDA6NJG2 315 aa17.05■□□□□ 0.32
VARS2-201ENST00000321897 CACNB1Q02641 598 aaPredicted RBP17.05■□□□□ 0.32
VARS2-201ENST00000321897 BRD3Q15059 726 aa17.05■□□□□ 0.32
VARS2-201ENST00000321897 ARMCX5Q6P1M9 558 aa17.05■□□□□ 0.32
VARS2-201ENST00000321897 SMARCC2Q8TAQ2 1214 aa17.05■□□□□ 0.32
VARS2-201ENST00000321897 GOLGA6BA6NDN3 693 aa17.05■□□□□ 0.32
VARS2-201ENST00000321897 SMIM23A6NLE4 172 aa17.05■□□□□ 0.32
VARS2-201ENST00000321897 GNAQP50148 359 aa17.05■□□□□ 0.32
VARS2-201ENST00000321897 CCZ1BP86790 482 aa17.05■□□□□ 0.32
VARS2-201ENST00000321897 CCZ1P86791 482 aaPredicted RBP17.05■□□□□ 0.32
VARS2-201ENST00000321897 SHC4Q6S5L8 630 aa17.05■□□□□ 0.32
VARS2-201ENST00000321897 DYDC1Q8WWB3 177 aa17.05■□□□□ 0.32
VARS2-201ENST00000321897 VEZTQ9HBM0 779 aa17.05■□□□□ 0.32
VARS2-201ENST00000321897 ABCB6Q9NP58 842 aa17.05■□□□□ 0.32
VARS2-201ENST00000321897 ADGRB2O60241 1585 aa17.05■□□□□ 0.32
VARS2-201ENST00000321897 MMP1P03956 469 aa17.05■□□□□ 0.32
VARS2-201ENST00000321897 SPAG1Q07617 926 aa17.05■□□□□ 0.32
VARS2-201ENST00000321897 USP17L2Q6R6M4 530 aa17.05■□□□□ 0.32
VARS2-201ENST00000321897 BANK1Q8NDB2 785 aa17.05■□□□□ 0.32
VARS2-201ENST00000321897 NYXQ9GZU5 481 aa17.05■□□□□ 0.32
VARS2-201ENST00000321897 SLC39A2Q9NP94 309 aa17.05■□□□□ 0.32
VARS2-201ENST00000321897 MYO5BQ9ULV0 1848 aa17.05■□□□□ 0.32
VARS2-201ENST00000321897 KLRF2D3W0D1 207 aa17.04■□□□□ 0.32
VARS2-201ENST00000321897 SMIM22K7EJ46 135 aa17.04■□□□□ 0.32
VARS2-201ENST00000321897 HLA-DOAP06340 250 aa17.04■□□□□ 0.32
VARS2-201ENST00000321897 KIF5AQ12840 1032 aa17.04■□□□□ 0.32
VARS2-201ENST00000321897 TMEM132AQ24JP5 1023 aa17.04■□□□□ 0.32
VARS2-201ENST00000321897 DCAF17Q5H9S7 520 aaPredicted RBP17.04■□□□□ 0.32
VARS2-201ENST00000321897 KCTD16Q68DU8 428 aa17.04■□□□□ 0.32
VARS2-201ENST00000321897 RIPOR2Q9Y4F9 1068 aa17.04■□□□□ 0.32
VARS2-201ENST00000321897 SMCO2A6NFE2 343 aa17.04■□□□□ 0.32
VARS2-201ENST00000321897 CYP19A1P11511 503 aaPredicted RBP17.04■□□□□ 0.32
VARS2-201ENST00000321897 ACRBPQ8NEB7 543 aa17.04■□□□□ 0.32
VARS2-201ENST00000321897 RBM28Q9NW13 759 aaKnown RBP17.04■□□□□ 0.32
VARS2-201ENST00000321897 UBN2Q6ZU65 1347 aa17.04■□□□□ 0.32
VARS2-201ENST00000321897 PP2D1A8MPX8 630 aa17.04■□□□□ 0.32
VARS2-201ENST00000321897 SCG2P13521 617 aa17.04■□□□□ 0.32
VARS2-201ENST00000321897 GNGT1P63211 74 aa17.04■□□□□ 0.32
VARS2-201ENST00000321897 CKAP4Q07065 602 aaKnown RBP17.04■□□□□ 0.32
VARS2-201ENST00000321897 ICE2Q659A1 982 aa17.04■□□□□ 0.32
VARS2-201ENST00000321897 EYA3Q99504 573 aa17.04■□□□□ 0.32
VARS2-201ENST00000321897 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.04■□□□□ 0.32
VARS2-201ENST00000321897 GSG1L2A8MUP6 293 aa17.03■□□□□ 0.32
VARS2-201ENST00000321897 IFNAR1P17181 557 aa17.03■□□□□ 0.32
VARS2-201ENST00000321897 CNGA4Q8IV77 575 aa17.03■□□□□ 0.32
VARS2-201ENST00000321897 WDR24Q96S15 920 aa17.03■□□□□ 0.32
VARS2-201ENST00000321897 LUC7LQ9NQ29 371 aaKnown RBP17.03■□□□□ 0.32
VARS2-201ENST00000321897 TMOD2Q9NZR1 351 aa17.03■□□□□ 0.32
VARS2-201ENST00000321897 KRT86O43790 486 aa17.03■□□□□ 0.32
VARS2-201ENST00000321897 CYLC1P35663 651 aaPredicted RBP17.03■□□□□ 0.32
VARS2-201ENST00000321897 LY9Q9HBG7 655 aa17.03■□□□□ 0.32
VARS2-201ENST00000321897 USP42Q9H9J4 1324 aaKnown RBP17.03■□□□□ 0.32
VARS2-201ENST00000321897 RNF40O75150 1001 aa17.03■□□□□ 0.32
VARS2-201ENST00000321897 SLC16A2P36021 539 aa17.03■□□□□ 0.32
VARS2-201ENST00000321897 GSTO1P78417 241 aa17.03■□□□□ 0.32
VARS2-201ENST00000321897 ANKRD2Q9GZV1 360 aa17.03■□□□□ 0.32
VARS2-201ENST00000321897 GDAQ9Y2T3 454 aa17.03■□□□□ 0.32
VARS2-201ENST00000321897 FMNL1O95466 1100 aaPredicted RBP17.02■□□□□ 0.32
VARS2-201ENST00000321897 KIAA0825Q8IV33 1275 aa17.02■□□□□ 0.32
VARS2-201ENST00000321897 BLIDQ8IZY5 108 aa17.02■□□□□ 0.32
VARS2-201ENST00000321897 SNX29Q8TEQ0 813 aa17.02■□□□□ 0.32
VARS2-201ENST00000321897 EXOC4Q96A65 974 aa17.02■□□□□ 0.32
VARS2-201ENST00000321897 EIF3CLB5ME19 914 aaKnown RBP17.02■□□□□ 0.32
VARS2-201ENST00000321897 MECOMQ03112 1051 aa17.02■□□□□ 0.32
VARS2-201ENST00000321897 RAPGEF1Q13905 1077 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms