RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 IL17RAQ96F46 866 aa18.44■□□□□ 0.54
PACS1-201ENST00000320580 ST3GAL1Q11201 340 aa18.43■□□□□ 0.54
PACS1-201ENST00000320580 CCNI2Q6ZMN8 369 aaPredicted RBP18.43■□□□□ 0.54
PACS1-201ENST00000320580 NUP58Q9BVL2 599 aa18.43■□□□□ 0.54
PACS1-201ENST00000320580 HSPD1P10809 573 aaKnown RBP18.43■□□□□ 0.54
PACS1-201ENST00000320580 IFNAR2P48551 515 aa18.43■□□□□ 0.54
PACS1-201ENST00000320580 IFI16Q16666 785 aaKnown RBP18.43■□□□□ 0.54
PACS1-201ENST00000320580 LRRC23Q53EV4 343 aaPredicted RBP18.43■□□□□ 0.54
PACS1-201ENST00000320580 PPFIBP2Q8ND30 876 aa18.43■□□□□ 0.54
PACS1-201ENST00000320580 XAGE3Q8WTP9 111 aa18.43■□□□□ 0.54
PACS1-201ENST00000320580 STMN4Q9H169 189 aaPredicted RBP18.43■□□□□ 0.54
PACS1-201ENST00000320580 VWDEQ8N2E2 1590 aa18.43■□□□□ 0.54
PACS1-201ENST00000320580 CCDC194A0A1B0GVG4 234 aa18.43■□□□□ 0.54
PACS1-201ENST00000320580 RANBP1P43487 201 aa18.43■□□□□ 0.54
PACS1-201ENST00000320580 COPS6Q7L5N1 327 aa18.43■□□□□ 0.54
PACS1-201ENST00000320580 MGARPQ8TDB4 240 aa18.43■□□□□ 0.54
PACS1-201ENST00000320580 KLHL29Q96CT2 875 aa18.43■□□□□ 0.54
PACS1-201ENST00000320580 EPN3Q9H201 632 aa18.43■□□□□ 0.54
PACS1-201ENST00000320580 RAB21Q9UL25 225 aa18.43■□□□□ 0.54
PACS1-201ENST00000320580 AGLP35573 1532 aa18.43■□□□□ 0.54
PACS1-201ENST00000320580 KRT13P13646 458 aa18.42■□□□□ 0.54
PACS1-201ENST00000320580 LSP1P33241 339 aa18.42■□□□□ 0.54
PACS1-201ENST00000320580 NOSTRINQ8IVI9 506 aa18.42■□□□□ 0.54
PACS1-201ENST00000320580 FAM207AQ9NSI2 230 aaPredicted RBP18.42■□□□□ 0.54
PACS1-201ENST00000320580 RANBP6O60518 1105 aaKnown RBP18.42■□□□□ 0.54
PACS1-201ENST00000320580 CDC25AP30304 524 aa18.42■□□□□ 0.54
PACS1-201ENST00000320580 MCM7P33993 719 aa18.42■□□□□ 0.54
PACS1-201ENST00000320580 HOOK3Q86VS8 718 aa18.42■□□□□ 0.54
PACS1-201ENST00000320580 CCDC13Q8IYE1 715 aa18.42■□□□□ 0.54
PACS1-201ENST00000320580 ZKSCAN3Q9BRR0 538 aa18.42■□□□□ 0.54
PACS1-201ENST00000320580 ABHD10Q9NUJ1 306 aa18.42■□□□□ 0.54
PACS1-201ENST00000320580 NOVA2Q9UNW9 492 aaKnown RBP18.42■□□□□ 0.54
PACS1-201ENST00000320580 GMNCA6NCL1 334 aa18.42■□□□□ 0.54
PACS1-201ENST00000320580 HMGB1P1B2RPK0 211 aaPredicted RBP18.42■□□□□ 0.54
PACS1-201ENST00000320580 MTMR3Q13615 1198 aa18.42■□□□□ 0.54
PACS1-201ENST00000320580 ESYT3A0FGR9 886 aa18.41■□□□□ 0.54
PACS1-201ENST00000320580 GPTP24298 496 aa18.41■□□□□ 0.54
PACS1-201ENST00000320580 MUM1Q2TAK8 710 aa18.41■□□□□ 0.54
PACS1-201ENST00000320580 CCDC26Q8TAB7 109 aa18.41■□□□□ 0.54
PACS1-201ENST00000320580 USP5P45974 858 aa18.41■□□□□ 0.54
PACS1-201ENST00000320580 GBP5Q96PP8 586 aa18.41■□□□□ 0.54
PACS1-201ENST00000320580 BMP2KQ9NSY1 1161 aaPredicted RBP18.41■□□□□ 0.54
PACS1-201ENST00000320580 TCP11L1Q9NUJ3 509 aa18.41■□□□□ 0.54
PACS1-201ENST00000320580 CD2APQ9Y5K6 639 aa18.41■□□□□ 0.54
PACS1-201ENST00000320580 DEPDC5O75140 1603 aa18.41■□□□□ 0.54
PACS1-201ENST00000320580 A0A1W2PRG0 241 aa18.41■□□□□ 0.54
PACS1-201ENST00000320580 CETN3O15182 167 aa18.41■□□□□ 0.54
PACS1-201ENST00000320580 KRT14P02533 472 aa18.41■□□□□ 0.54
PACS1-201ENST00000320580 PTPROQ16827 1216 aa18.41■□□□□ 0.54
PACS1-201ENST00000320580 ANKRD13DQ6ZTN6 518 aa18.41■□□□□ 0.54
PACS1-201ENST00000320580 FNBP4Q8N3X1 1017 aaPredicted RBP18.41■□□□□ 0.54
PACS1-201ENST00000320580 KCNH5Q8NCM2 988 aa18.41■□□□□ 0.54
PACS1-201ENST00000320580 TRIM10Q9UDY6 481 aa18.41■□□□□ 0.54
PACS1-201ENST00000320580 ZNF185O15231 689 aa18.4■□□□□ 0.54
PACS1-201ENST00000320580 NAA35Q5VZE5 725 aa18.4■□□□□ 0.54
PACS1-201ENST00000320580 CYB5D1Q6P9G0 228 aa18.4■□□□□ 0.54
PACS1-201ENST00000320580 ALKQ9UM73 1620 aa18.4■□□□□ 0.54
PACS1-201ENST00000320580 TARSL2A2RTX5 802 aaKnown RBP18.4■□□□□ 0.54
PACS1-201ENST00000320580 PSEN1P49768 467 aa18.4■□□□□ 0.54
PACS1-201ENST00000320580 SOGA3Q5TF21 947 aa18.4■□□□□ 0.54
PACS1-201ENST00000320580 ZKSCAN4Q969J2 545 aaPredicted RBP18.4■□□□□ 0.54
PACS1-201ENST00000320580 DDX21Q9NR30 783 aaKnown RBP eCLIP18.4■□□□□ 0.54
PACS1-201ENST00000320580 LRWD1Q9UFC0 647 aa18.4■□□□□ 0.54
PACS1-201ENST00000320580 CPSF1Q10570 1443 aaKnown RBP18.4■□□□□ 0.54
PACS1-201ENST00000320580 PDHBP11177 359 aa18.4■□□□□ 0.54
PACS1-201ENST00000320580 TOM1L2Q6ZVM7 507 aa18.4■□□□□ 0.54
PACS1-201ENST00000320580 SMTNP53814 917 aa18.4■□□□□ 0.54
PACS1-201ENST00000320580 SESN3P58005 492 aa18.4■□□□□ 0.54
PACS1-201ENST00000320580 NCAPHQ15003 741 aa18.4■□□□□ 0.54
PACS1-201ENST00000320580 RASGRP2Q7LDG7 609 aa18.4■□□□□ 0.54
PACS1-201ENST00000320580 SGSM3Q96HU1 749 aa18.4■□□□□ 0.54
PACS1-201ENST00000320580 BATF3Q9NR55 127 aa18.4■□□□□ 0.54
PACS1-201ENST00000320580 BICDL2A1A5D9 508 aa18.39■□□□□ 0.53
PACS1-201ENST00000320580 KRT2P35908 639 aa18.39■□□□□ 0.53
PACS1-201ENST00000320580 KRT31Q15323 416 aa18.39■□□□□ 0.53
PACS1-201ENST00000320580 RASIP1Q5U651 963 aa18.39■□□□□ 0.53
PACS1-201ENST00000320580 RRAGAQ7L523 313 aa18.39■□□□□ 0.53
PACS1-201ENST00000320580 CATIPQ7Z7H3 387 aa18.39■□□□□ 0.53
PACS1-201ENST00000320580 PLAAQ9Y263 795 aa18.39■□□□□ 0.53
PACS1-201ENST00000320580 MOCS3O95396 460 aa18.39■□□□□ 0.53
PACS1-201ENST00000320580 MMP14P50281 582 aa18.39■□□□□ 0.53
PACS1-201ENST00000320580 RWDD2BP57060 319 aa18.39■□□□□ 0.53
PACS1-201ENST00000320580 FMR1Q06787 632 aaKnown RBP eCLIP18.39■□□□□ 0.53
PACS1-201ENST00000320580 WDR93Q6P2C0 686 aa18.39■□□□□ 0.53
PACS1-201ENST00000320580 LRRC1Q9BTT6 524 aa18.39■□□□□ 0.53
PACS1-201ENST00000320580 HDLBPQ00341 1268 aaKnown RBP18.39■□□□□ 0.53
PACS1-201ENST00000320580 ARMC9Q7Z3E5 817 aa18.39■□□□□ 0.53
PACS1-201ENST00000320580 UHMK1Q8TAS1 419 aaKnown RBP18.39■□□□□ 0.53
PACS1-201ENST00000320580 WDR66Q8TBY9 1149 aa18.39■□□□□ 0.53
PACS1-201ENST00000320580 KCNV2Q8TDN2 545 aa18.39■□□□□ 0.53
PACS1-201ENST00000320580 KIFC2Q96AC6 838 aa18.39■□□□□ 0.53
PACS1-201ENST00000320580 TSKSQ9UJT2 592 aa18.39■□□□□ 0.53
PACS1-201ENST00000320580 RGS16O15492 202 aaPredicted RBP18.38■□□□□ 0.53
PACS1-201ENST00000320580 PDE4BQ07343 736 aa18.38■□□□□ 0.53
PACS1-201ENST00000320580 CASP1P29466 404 aa18.38■□□□□ 0.53
PACS1-201ENST00000320580 PPARAQ07869 468 aa18.38■□□□□ 0.53
PACS1-201ENST00000320580 SLMAPQ14BN4 828 aa18.38■□□□□ 0.53
PACS1-201ENST00000320580 SHC4Q6S5L8 630 aa18.38■□□□□ 0.53
PACS1-201ENST00000320580 METTL16Q86W50 562 aaKnown RBP18.38■□□□□ 0.53
PACS1-201ENST00000320580 CSRNP2Q9H175 543 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms