RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 CLIP2Q9UDT6 1046 aa20.5■□□□□ 0.87
RAB39A-201ENST00000320578 MYH8P13535 1937 aa20.5■□□□□ 0.87
RAB39A-201ENST00000320578 CUTAO60888 179 aa20.5■□□□□ 0.87
RAB39A-201ENST00000320578 CCDC12Q8WUD4 166 aaPredicted RBP20.5■□□□□ 0.87
RAB39A-201ENST00000320578 GOLPH3LQ9H4A5 285 aa20.5■□□□□ 0.87
RAB39A-201ENST00000320578 NOL7Q9UMY1 257 aaKnown RBP20.5■□□□□ 0.87
RAB39A-201ENST00000320578 ZBTB12Q9Y330 459 aaPredicted RBP20.5■□□□□ 0.87
RAB39A-201ENST00000320578 ZNF280AP59817 542 aaPredicted RBP20.49■□□□□ 0.87
RAB39A-201ENST00000320578 TPRNQ4KMQ1 711 aa20.49■□□□□ 0.87
RAB39A-201ENST00000320578 GPATCH4Q5T3I0 446 aaKnown RBP20.49■□□□□ 0.87
RAB39A-201ENST00000320578 USP17L2Q6R6M4 530 aa20.49■□□□□ 0.87
RAB39A-201ENST00000320578 FMR1NBQ8N0W7 255 aaPredicted RBP20.49■□□□□ 0.87
RAB39A-201ENST00000320578 RRP36Q96EU6 259 aaKnown RBP20.49■□□□□ 0.87
RAB39A-201ENST00000320578 CABP5Q9NP86 173 aa20.49■□□□□ 0.87
RAB39A-201ENST00000320578 PPP1R1BQ9UD71 204 aaPredicted RBP20.49■□□□□ 0.87
RAB39A-201ENST00000320578 PCDHA4Q9UN74 947 aa20.49■□□□□ 0.87
RAB39A-201ENST00000320578 BCS1LQ9Y276 419 aa20.49■□□□□ 0.87
RAB39A-201ENST00000320578 USP17L5A8MUK1 530 aa20.48■□□□□ 0.87
RAB39A-201ENST00000320578 MYO1BO43795 1136 aa20.48■□□□□ 0.87
RAB39A-201ENST00000320578 TBC1D12O60347 775 aa20.48■□□□□ 0.87
RAB39A-201ENST00000320578 MPHOSPH10O00566 681 aaKnown RBP20.48■□□□□ 0.87
RAB39A-201ENST00000320578 KINO60870 393 aaKnown RBP20.48■□□□□ 0.87
RAB39A-201ENST00000320578 CCDC192P0DO97 292 aa20.48■□□□□ 0.87
RAB39A-201ENST00000320578 ZNF543Q08ER8 600 aa20.48■□□□□ 0.87
RAB39A-201ENST00000320578 UVSSAQ2YD98 709 aa20.48■□□□□ 0.87
RAB39A-201ENST00000320578 ZNF579Q8NAF0 562 aaKnown RBP20.48■□□□□ 0.87
RAB39A-201ENST00000320578 DPF2Q92785 391 aa20.48■□□□□ 0.87
RAB39A-201ENST00000320578 CSRNP1Q96S65 589 aa20.48■□□□□ 0.87
RAB39A-201ENST00000320578 TRIM75PA6NK02 468 aa20.47■□□□□ 0.87
RAB39A-201ENST00000320578 STXBP3O00186 592 aa20.47■□□□□ 0.87
RAB39A-201ENST00000320578 BLIDQ8IZY5 108 aa20.47■□□□□ 0.87
RAB39A-201ENST00000320578 KRI1Q8N9T8 703 aaKnown RBP20.47■□□□□ 0.87
RAB39A-201ENST00000320578 TIGD1Q96MW7 591 aa20.47■□□□□ 0.87
RAB39A-201ENST00000320578 M0R2N6 131 aa20.46■□□□□ 0.87
RAB39A-201ENST00000320578 FZD9O00144 591 aa20.46■□□□□ 0.87
RAB39A-201ENST00000320578 GOLGA8HP0CJ92 632 aa20.46■□□□□ 0.87
RAB39A-201ENST00000320578 VEGFAP15692 232 aaPredicted RBP20.46■□□□□ 0.87
RAB39A-201ENST00000320578 PTPREP23469 700 aa20.46■□□□□ 0.87
RAB39A-201ENST00000320578 ABCB5Q2M3G0 1257 aa20.46■□□□□ 0.87
RAB39A-201ENST00000320578 WWC2Q6AWC2 1192 aa20.46■□□□□ 0.87
RAB39A-201ENST00000320578 ZMYND12Q9H0C1 365 aa20.46■□□□□ 0.87
RAB39A-201ENST00000320578 SEC63Q9UGP8 760 aaKnown RBP20.46■□□□□ 0.87
RAB39A-201ENST00000320578 HPSEQ9Y251 543 aa20.46■□□□□ 0.87
RAB39A-201ENST00000320578 CNTNAP1P78357 1384 aa20.46■□□□□ 0.87
RAB39A-201ENST00000320578 ESYT2A0FGR8 921 aa20.46■□□□□ 0.87
RAB39A-201ENST00000320578 RESP18Q5W5W9 173 aa20.46■□□□□ 0.87
RAB39A-201ENST00000320578 LRRC47Q8N1G4 583 aaKnown RBP20.46■□□□□ 0.87
RAB39A-201ENST00000320578 DCAF4Q8WV16 495 aa20.46■□□□□ 0.87
RAB39A-201ENST00000320578 PSDA5PKW4 1024 aaPredicted RBP20.45■□□□□ 0.86
RAB39A-201ENST00000320578 TCP10L2B9ZVM9 353 aa20.45■□□□□ 0.86
RAB39A-201ENST00000320578 MARCKSP29966 332 aaPredicted RBP20.45■□□□□ 0.86
RAB39A-201ENST00000320578 MAP3K10Q02779 954 aa20.45■□□□□ 0.86
RAB39A-201ENST00000320578 RBM26Q5T8P6 1007 aaKnown RBP20.45■□□□□ 0.86
RAB39A-201ENST00000320578 MYOZ2Q9NPC6 264 aa20.45■□□□□ 0.86
RAB39A-201ENST00000320578 PCDHB6Q9Y5E3 794 aa20.45■□□□□ 0.86
RAB39A-201ENST00000320578 SRPRBQ9Y5M8 271 aaKnown RBP20.45■□□□□ 0.86
RAB39A-201ENST00000320578 CAVIN2O95810 425 aa20.44■□□□□ 0.86
RAB39A-201ENST00000320578 NDUFA8P51970 172 aa20.44■□□□□ 0.86
RAB39A-201ENST00000320578 CAMK4Q16566 473 aa20.44■□□□□ 0.86
RAB39A-201ENST00000320578 ELOA2Q8IYF1 753 aaPredicted RBP20.44■□□□□ 0.86
RAB39A-201ENST00000320578 GMCL1P1Q8NEA9 526 aa20.44■□□□□ 0.86
RAB39A-201ENST00000320578 ANP32BQ92688 251 aaKnown RBP20.44■□□□□ 0.86
RAB39A-201ENST00000320578 FBXO2Q9UK22 296 aaPredicted RBP20.44■□□□□ 0.86
RAB39A-201ENST00000320578 ARFGEF1Q9Y6D6 1849 aa20.44■□□□□ 0.86
RAB39A-201ENST00000320578 A0A1B0GVL5 298 aa20.43■□□□□ 0.86
RAB39A-201ENST00000320578 CLRN2A0PK11 232 aa20.43■□□□□ 0.86
RAB39A-201ENST00000320578 WNT10BO00744 389 aa20.43■□□□□ 0.86
RAB39A-201ENST00000320578 EEF2P13639 858 aaKnown RBP20.43■□□□□ 0.86
RAB39A-201ENST00000320578 GNA11P29992 359 aa20.43■□□□□ 0.86
RAB39A-201ENST00000320578 EIF6P56537 245 aaKnown RBP20.43■□□□□ 0.86
RAB39A-201ENST00000320578 EARS2Q5JPH6 523 aaKnown RBP20.43■□□□□ 0.86
RAB39A-201ENST00000320578 TYW1BQ6NUM6 668 aa20.43■□□□□ 0.86
RAB39A-201ENST00000320578 HEATR3Q7Z4Q2 680 aa20.43■□□□□ 0.86
RAB39A-201ENST00000320578 SIAH1Q8IUQ4 282 aa20.43■□□□□ 0.86
RAB39A-201ENST00000320578 GPKOWQ92917 476 aaPredicted RBP eCLIP20.43■□□□□ 0.86
RAB39A-201ENST00000320578 MTMR8Q96EF0 704 aa20.43■□□□□ 0.86
RAB39A-201ENST00000320578 PANK2Q9BZ23 570 aa20.43■□□□□ 0.86
RAB39A-201ENST00000320578 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.43■□□□□ 0.86
RAB39A-201ENST00000320578 PGAP2Q9UHJ9 254 aa20.43■□□□□ 0.86
RAB39A-201ENST00000320578 MTMR7Q9Y216 660 aa20.43■□□□□ 0.86
RAB39A-201ENST00000320578 PFKFB1P16118 471 aa20.43■□□□□ 0.86
RAB39A-201ENST00000320578 TNNI2P48788 182 aa20.43■□□□□ 0.86
RAB39A-201ENST00000320578 ICA1Q05084 483 aa20.43■□□□□ 0.86
RAB39A-201ENST00000320578 PPP1R18Q6NYC8 613 aa20.43■□□□□ 0.86
RAB39A-201ENST00000320578 SHC4Q6S5L8 630 aa20.43■□□□□ 0.86
RAB39A-201ENST00000320578 PIBF1Q8WXW3 757 aa20.43■□□□□ 0.86
RAB39A-201ENST00000320578 SPON1Q9HCB6 807 aa20.43■□□□□ 0.86
RAB39A-201ENST00000320578 FAM196BA6NMK8 535 aa20.42■□□□□ 0.86
RAB39A-201ENST00000320578 TYRO3Q06418 890 aa20.42■□□□□ 0.86
RAB39A-201ENST00000320578 SEPT2Q15019 361 aa20.42■□□□□ 0.86
RAB39A-201ENST00000320578 TTC38Q5R3I4 469 aa20.42■□□□□ 0.86
RAB39A-201ENST00000320578 CLEC10AQ8IUN9 316 aa20.42■□□□□ 0.86
RAB39A-201ENST00000320578 FERMT2Q96AC1 680 aa20.42■□□□□ 0.86
RAB39A-201ENST00000320578 GMCL1Q96IK5 515 aa20.42■□□□□ 0.86
RAB39A-201ENST00000320578 PIGSQ96S52 555 aa20.42■□□□□ 0.86
RAB39A-201ENST00000320578 C6orf50Q9HD87 102 aa20.42■□□□□ 0.86
RAB39A-201ENST00000320578 PNMA6FA0A0J9YX94 578 aa20.41■□□□□ 0.86
RAB39A-201ENST00000320578 ZNF202O95125 648 aa20.41■□□□□ 0.86
RAB39A-201ENST00000320578 SASS6Q6UVJ0 657 aa20.41■□□□□ 0.86
RAB39A-201ENST00000320578 RASGRP2Q7LDG7 609 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms