RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 NOSTRINQ8IVI9 506 aa16.25■□□□□ 0.19
VRK3-201ENST00000316763 PRMT6Q96LA8 375 aaPredicted RBP16.25■□□□□ 0.19
VRK3-201ENST00000316763 HPSEQ9Y251 543 aa16.25■□□□□ 0.19
VRK3-201ENST00000316763 GTF2F1P35269 517 aaKnown RBP eCLIP16.24■□□□□ 0.19
VRK3-201ENST00000316763 NFIAQ12857 509 aa16.24■□□□□ 0.19
VRK3-201ENST00000316763 DHX8Q14562 1220 aaKnown RBP16.24■□□□□ 0.19
VRK3-201ENST00000316763 DLGAP5Q15398 846 aa16.24■□□□□ 0.19
VRK3-201ENST00000316763 RESP18Q5W5W9 173 aa16.24■□□□□ 0.19
VRK3-201ENST00000316763 ZNF654Q8IZM8 581 aa16.24■□□□□ 0.19
VRK3-201ENST00000316763 CRACR2BQ8N4Y2 399 aaPredicted RBP16.24■□□□□ 0.19
VRK3-201ENST00000316763 ENAHQ8N8S7 591 aaPredicted RBP16.24■□□□□ 0.19
VRK3-201ENST00000316763 FANCBQ8NB91 859 aa16.24■□□□□ 0.19
VRK3-201ENST00000316763 MTMR14Q8NCE2 650 aa16.24■□□□□ 0.19
VRK3-201ENST00000316763 CACTINQ8WUQ7 758 aaKnown RBP16.24■□□□□ 0.19
VRK3-201ENST00000316763 OSBPL5Q9H0X9 879 aaPredicted RBP16.24■□□□□ 0.19
VRK3-201ENST00000316763 FOXP1Q9H334 677 aaPredicted RBP16.24■□□□□ 0.19
VRK3-201ENST00000316763 ZNF287Q9HBT7 754 aa16.24■□□□□ 0.19
VRK3-201ENST00000316763 FAM13BQ9NYF5 915 aa16.24■□□□□ 0.19
VRK3-201ENST00000316763 TNKSO95271 1327 aa16.24■□□□□ 0.19
VRK3-201ENST00000316763 MYH6P13533 1939 aa16.24■□□□□ 0.19
VRK3-201ENST00000316763 A0A087WWV3 80 aa16.23■□□□□ 0.19
VRK3-201ENST00000316763 LMOD1P29536 600 aaPredicted RBP16.23■□□□□ 0.19
VRK3-201ENST00000316763 GSDMDP57764 484 aa16.23■□□□□ 0.19
VRK3-201ENST00000316763 GABPAQ06546 454 aa16.23■□□□□ 0.19
VRK3-201ENST00000316763 PICALMQ13492 652 aa16.23■□□□□ 0.19
VRK3-201ENST00000316763 DPCR1Q3MIW9 517 aa16.23■□□□□ 0.19
VRK3-201ENST00000316763 CCDC144BQ3MJ40 725 aa16.23■□□□□ 0.19
VRK3-201ENST00000316763 TBC1D10BQ4KMP7 808 aaPredicted RBP16.23■□□□□ 0.19
VRK3-201ENST00000316763 LRRC8AQ8IWT6 810 aa16.23■□□□□ 0.19
VRK3-201ENST00000316763 KRI1Q8N9T8 703 aaKnown RBP16.23■□□□□ 0.19
VRK3-201ENST00000316763 HOOK1Q9UJC3 728 aaKnown RBP16.23■□□□□ 0.19
VRK3-201ENST00000316763 SCN4AP35499 1836 aa16.23■□□□□ 0.19
VRK3-201ENST00000316763 WDR90Q96KV7 1748 aa16.23■□□□□ 0.19
VRK3-201ENST00000316763 SPDYE2BA6NHP3 402 aa16.23■□□□□ 0.19
VRK3-201ENST00000316763 POTECB2RU33 542 aa16.23■□□□□ 0.19
VRK3-201ENST00000316763 SPDYE6P0CI01 402 aa16.23■□□□□ 0.19
VRK3-201ENST00000316763 XBP1P17861 261 aa16.23■□□□□ 0.19
VRK3-201ENST00000316763 CDK8P49336 464 aa16.23■□□□□ 0.19
VRK3-201ENST00000316763 RBM10P98175 930 aaKnown RBP16.23■□□□□ 0.19
VRK3-201ENST00000316763 AKAP17AQ02040 695 aaKnown RBP16.23■□□□□ 0.19
VRK3-201ENST00000316763 RILPL1Q5EBL4 403 aa16.23■□□□□ 0.19
VRK3-201ENST00000316763 SHC4Q6S5L8 630 aa16.23■□□□□ 0.19
VRK3-201ENST00000316763 SLC44A5Q8NCS7 719 aa16.23■□□□□ 0.19
VRK3-201ENST00000316763 NUP133Q8WUM0 1156 aa16.23■□□□□ 0.19
VRK3-201ENST00000316763 ZBED3Q96IU2 234 aaPredicted RBP16.23■□□□□ 0.19
VRK3-201ENST00000316763 MKNK2Q9HBH9 465 aa16.23■□□□□ 0.19
VRK3-201ENST00000316763 IMPACTQ9P2X3 320 aa16.23■□□□□ 0.19
VRK3-201ENST00000316763 WNT10BO00744 389 aa16.22■□□□□ 0.19
VRK3-201ENST00000316763 RASA1P20936 1047 aa16.22■□□□□ 0.19
VRK3-201ENST00000316763 NBPF9Q3BBW0 867 aa16.22■□□□□ 0.19
VRK3-201ENST00000316763 FAM47AQ5JRC9 791 aa16.22■□□□□ 0.19
VRK3-201ENST00000316763 DIS3L2Q8IYB7 885 aaKnown RBP16.22■□□□□ 0.19
VRK3-201ENST00000316763 TCP11L1Q9NUJ3 509 aa16.22■□□□□ 0.19
VRK3-201ENST00000316763 FAM198AQ9UFP1 575 aa16.22■□□□□ 0.19
VRK3-201ENST00000316763 HACL1Q9UJ83 578 aa16.22■□□□□ 0.19
VRK3-201ENST00000316763 TUBE1Q9UJT0 475 aa16.22■□□□□ 0.19
VRK3-201ENST00000316763 CEP131Q9UPN4 1083 aa16.22■□□□□ 0.19
VRK3-201ENST00000316763 TSPY2A6NKD2 308 aa16.21■□□□□ 0.19
VRK3-201ENST00000316763 BIN1O00499 593 aa16.21■□□□□ 0.19
VRK3-201ENST00000316763 IKBKBO14920 756 aa16.21■□□□□ 0.19
VRK3-201ENST00000316763 KIF4BQ2VIQ3 1234 aa16.21■□□□□ 0.19
VRK3-201ENST00000316763 NBPF11Q86T75 865 aa16.21■□□□□ 0.19
VRK3-201ENST00000316763 ELOA2Q8IYF1 753 aaPredicted RBP16.21■□□□□ 0.19
VRK3-201ENST00000316763 TRPM4Q8TD43 1214 aa16.21■□□□□ 0.19
VRK3-201ENST00000316763 TDRD3Q9H7E2 651 aaKnown RBP16.21■□□□□ 0.19
VRK3-201ENST00000316763 BTBD18B2RXH4 712 aa16.21■□□□□ 0.19
VRK3-201ENST00000316763 GUCY1A2P33402 732 aa16.21■□□□□ 0.19
VRK3-201ENST00000316763 HIRAP54198 1017 aaPredicted RBP16.21■□□□□ 0.19
VRK3-201ENST00000316763 TFAP4Q01664 338 aa16.21■□□□□ 0.19
VRK3-201ENST00000316763 ZNF444Q8N0Y2 327 aaPredicted RBP16.21■□□□□ 0.19
VRK3-201ENST00000316763 ANKS1AQ92625 1134 aa16.21■□□□□ 0.19
VRK3-201ENST00000316763 RNF26Q9BY78 433 aaPredicted RBP16.21■□□□□ 0.19
VRK3-201ENST00000316763 EHD4Q9H223 541 aa16.21■□□□□ 0.19
VRK3-201ENST00000316763 DHX36Q9H2U1 1008 aaKnown RBP16.21■□□□□ 0.19
VRK3-201ENST00000316763 IL17RBQ9NRM6 502 aa16.21■□□□□ 0.19
VRK3-201ENST00000316763 ADARB2Q9NS39 739 aaKnown RBP16.21■□□□□ 0.19
VRK3-201ENST00000316763 KCNH3Q9ULD8 1083 aa16.21■□□□□ 0.19
VRK3-201ENST00000316763 MYH1P12882 1939 aa16.21■□□□□ 0.18
VRK3-201ENST00000316763 NMT2O60551 498 aa16.2■□□□□ 0.18
VRK3-201ENST00000316763 CALM1P0DP23 149 aa16.2■□□□□ 0.18
VRK3-201ENST00000316763 CALM2P0DP24 149 aa16.2■□□□□ 0.18
VRK3-201ENST00000316763 CALM3P0DP25 149 aa16.2■□□□□ 0.18
VRK3-201ENST00000316763 CACNB3P54284 484 aa16.2■□□□□ 0.18
VRK3-201ENST00000316763 TPD52L1Q16890 204 aaPredicted RBP16.2■□□□□ 0.18
VRK3-201ENST00000316763 IFIT1BQ5T764 474 aaKnown RBP16.2■□□□□ 0.18
VRK3-201ENST00000316763 RCSD1Q6JBY9 416 aa16.2■□□□□ 0.18
VRK3-201ENST00000316763 FILIP1Q7Z7B0 1213 aa16.2■□□□□ 0.18
VRK3-201ENST00000316763 CATIPQ7Z7H3 387 aa16.2■□□□□ 0.18
VRK3-201ENST00000316763 ZFPM1Q8IX07 1006 aa16.2■□□□□ 0.18
VRK3-201ENST00000316763 CNNM3Q8NE01 707 aa16.2■□□□□ 0.18
VRK3-201ENST00000316763 RRAGCQ9HB90 399 aa16.2■□□□□ 0.18
VRK3-201ENST00000316763 RBM28Q9NW13 759 aaKnown RBP16.2■□□□□ 0.18
VRK3-201ENST00000316763 ENTPD3O75355 529 aa16.19■□□□□ 0.18
VRK3-201ENST00000316763 SMC2O95347 1197 aa16.19■□□□□ 0.18
VRK3-201ENST00000316763 EPHX2P34913 555 aa16.19■□□□□ 0.18
VRK3-201ENST00000316763 CCDC178Q5BJE1 867 aa16.19■□□□□ 0.18
VRK3-201ENST00000316763 DGKHQ86XP1 1220 aa16.19■□□□□ 0.18
VRK3-201ENST00000316763 ZNF526Q8TF50 670 aaPredicted RBP16.19■□□□□ 0.18
VRK3-201ENST00000316763 CLIC6Q96NY7 704 aa16.19■□□□□ 0.18
VRK3-201ENST00000316763 SERPINB13Q9UIV8 391 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms