RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 hCG_1642624A0A1W2PR95 340 aa12.37□□□□□ -0.43
CASP3-201ENST00000308394 PRPF40AO75400 957 aaKnown RBP12.37□□□□□ -0.43
CASP3-201ENST00000308394 DEXIO95424 95 aa12.37□□□□□ -0.43
CASP3-201ENST00000308394 DNM1Q05193 864 aaKnown RBP12.37□□□□□ -0.43
CASP3-201ENST00000308394 TAF3Q5VWG9 929 aa12.37□□□□□ -0.43
CASP3-201ENST00000308394 STAG2Q8N3U4 1231 aa12.37□□□□□ -0.43
CASP3-201ENST00000308394 SRBD1Q8N5C6 995 aaKnown RBP12.37□□□□□ -0.43
CASP3-201ENST00000308394 PIBF1Q8WXW3 757 aa12.37□□□□□ -0.43
CASP3-201ENST00000308394 GDPD2Q9HCC8 539 aa12.37□□□□□ -0.43
CASP3-201ENST00000308394 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.37□□□□□ -0.438e-7■■■■■ 145.9
CASP3-201ENST00000308394 V9GY48 417 aaPredicted RBP12.37□□□□□ -0.43
CASP3-201ENST00000308394 COL2A1P02458 1487 aaPredicted RBP12.37□□□□□ -0.43
CASP3-201ENST00000308394 IGKV6D-41A0A0C4DH26 115 aa12.36□□□□□ -0.43
CASP3-201ENST00000308394 GOLGA8HP0CJ92 632 aa12.36□□□□□ -0.43
CASP3-201ENST00000308394 EPS15P42566 896 aa12.36□□□□□ -0.43
CASP3-201ENST00000308394 BANK1Q8NDB2 785 aa12.36□□□□□ -0.43
CASP3-201ENST00000308394 ATL2Q8NHH9 583 aa12.36□□□□□ -0.43
CASP3-201ENST00000308394 MAP3K14Q99558 947 aa12.36□□□□□ -0.43
CASP3-201ENST00000308394 RNF26Q9BY78 433 aaPredicted RBP12.36□□□□□ -0.43
CASP3-201ENST00000308394 ZSCAN16Q9H4T2 348 aaPredicted RBP12.36□□□□□ -0.43
CASP3-201ENST00000308394 YY1AP1Q9H869 796 aa12.36□□□□□ -0.43
CASP3-201ENST00000308394 CABP5Q9NP86 173 aa12.36□□□□□ -0.43
CASP3-201ENST00000308394 GRM4Q14833 912 aa12.36□□□□□ -0.43
CASP3-201ENST00000308394 SEPT2Q15019 361 aa12.36□□□□□ -0.43
CASP3-201ENST00000308394 RASGRP2Q7LDG7 609 aa12.36□□□□□ -0.43
CASP3-201ENST00000308394 MAD2L2Q9UI95 211 aa12.36□□□□□ -0.43
CASP3-201ENST00000308394 CNPY2Q9Y2B0 182 aa12.36□□□□□ -0.43
CASP3-201ENST00000308394 MYH8P13535 1937 aa12.36□□□□□ -0.43
CASP3-201ENST00000308394 GOLGA6CA6NDK9 693 aa12.35□□□□□ -0.43
CASP3-201ENST00000308394 GOLGA6BA6NDN3 693 aa12.35□□□□□ -0.43
CASP3-201ENST00000308394 GH2P01242 217 aa12.35□□□□□ -0.43
CASP3-201ENST00000308394 PARP1P09874 1014 aaKnown RBP12.35□□□□□ -0.43
CASP3-201ENST00000308394 GOLGA6DP0CG33 693 aa12.35□□□□□ -0.43
CASP3-201ENST00000308394 NOVP48745 357 aa12.35□□□□□ -0.43
CASP3-201ENST00000308394 GNAQP50148 359 aa12.35□□□□□ -0.43
CASP3-201ENST00000308394 USP17L2Q6R6M4 530 aa12.35□□□□□ -0.43
CASP3-201ENST00000308394 TMEM179Q6ZVK1 233 aa12.35□□□□□ -0.43
CASP3-201ENST00000308394 RNF217Q8TC41 542 aa12.35□□□□□ -0.43
CASP3-201ENST00000308394 TRPM4Q8TD43 1214 aa12.35□□□□□ -0.43
CASP3-201ENST00000308394 KANSL2Q9H9L4 492 aa12.35□□□□□ -0.43
CASP3-201ENST00000308394 GOLGA6AQ9NYA3 693 aa12.35□□□□□ -0.43
CASP3-201ENST00000308394 SIPA1L1O43166 1804 aa12.35□□□□□ -0.43
CASP3-201ENST00000308394 PRPF3O43395 683 aaKnown RBP12.35□□□□□ -0.43
CASP3-201ENST00000308394 SCP2P22307 547 aa12.35□□□□□ -0.43
CASP3-201ENST00000308394 LMOD1P29536 600 aaPredicted RBP12.35□□□□□ -0.43
CASP3-201ENST00000308394 FUT2Q10981 343 aa12.35□□□□□ -0.43
CASP3-201ENST00000308394 RESTQ13127 1097 aa12.35□□□□□ -0.43
CASP3-201ENST00000308394 ANGEL2Q5VTE6 544 aaKnown RBP12.35□□□□□ -0.43
CASP3-201ENST00000308394 KRT40Q6A162 431 aa12.35□□□□□ -0.43
CASP3-201ENST00000308394 SDR16C5Q8N3Y7 309 aa12.35□□□□□ -0.43
CASP3-201ENST00000308394 DEFB129Q9H1M3 183 aa12.35□□□□□ -0.43
CASP3-201ENST00000308394 SBF1O95248 1867 aa12.35□□□□□ -0.43
CASP3-201ENST00000308394 USP17L5A8MUK1 530 aa12.34□□□□□ -0.43
CASP3-201ENST00000308394 FIBPO43427 364 aa12.34□□□□□ -0.43
CASP3-201ENST00000308394 EEF2P13639 858 aaKnown RBP12.34□□□□□ -0.43
CASP3-201ENST00000308394 ICA1Q05084 483 aa12.34□□□□□ -0.43
CASP3-201ENST00000308394 GNL2Q13823 731 aaKnown RBP12.34□□□□□ -0.43
CASP3-201ENST00000308394 RRP1BQ14684 758 aaKnown RBP12.34□□□□□ -0.43
CASP3-201ENST00000308394 DPY19L2Q6NUT2 758 aa12.34□□□□□ -0.43
CASP3-201ENST00000308394 CNTNAP5Q8WYK1 1306 aa12.34□□□□□ -0.43
CASP3-201ENST00000308394 DICER1Q9UPY3 1922 aaKnown RBP12.34□□□□□ -0.43
CASP3-201ENST00000308394 KLRF2D3W0D1 207 aa12.34□□□□□ -0.43
CASP3-201ENST00000308394 TRAK2O60296 914 aa12.34□□□□□ -0.43
CASP3-201ENST00000308394 TFIP11Q9UBB9 837 aaKnown RBP12.34□□□□□ -0.43
CASP3-201ENST00000308394 ISY1Q9ULR0 285 aaKnown RBP12.34□□□□□ -0.43
CASP3-201ENST00000308394 FRMPD2Q68DX3 1309 aaPredicted RBP12.34□□□□□ -0.43
CASP3-201ENST00000308394 PALM3A6NDB9 673 aaPredicted RBP12.34□□□□□ -0.43
CASP3-201ENST00000308394 TBC1D12O60347 775 aa12.34□□□□□ -0.43
CASP3-201ENST00000308394 PDHBP11177 359 aa12.34□□□□□ -0.43
CASP3-201ENST00000308394 XBP1P17861 261 aa12.34□□□□□ -0.43
CASP3-201ENST00000308394 KRT85P78386 507 aa12.34□□□□□ -0.43
CASP3-201ENST00000308394 JAG1P78504 1218 aa12.34□□□□□ -0.43
CASP3-201ENST00000308394 LMBRD1Q9NUN5 540 aa12.34□□□□□ -0.43
CASP3-201ENST00000308394 PGAP2Q9UHJ9 254 aa12.34□□□□□ -0.43
CASP3-201ENST00000308394 PKN1Q16512 942 aa12.33□□□□□ -0.44
CASP3-201ENST00000308394 USP48Q86UV5 1035 aa12.33□□□□□ -0.44
CASP3-201ENST00000308394 CPVLQ9H3G5 476 aa12.33□□□□□ -0.44
CASP3-201ENST00000308394 GGA3Q9NZ52 723 aa12.33□□□□□ -0.44
CASP3-201ENST00000308394 NYAP2Q9P242 653 aa12.33□□□□□ -0.44
CASP3-201ENST00000308394 KCNJ14Q9UNX9 436 aa12.33□□□□□ -0.44
CASP3-201ENST00000308394 GRIN3BO60391 1043 aa12.33□□□□□ -0.44
CASP3-201ENST00000308394 HIRAP54198 1017 aaPredicted RBP12.33□□□□□ -0.44
CASP3-201ENST00000308394 SAFBQ15424 915 aaKnown RBP eCLIP12.33□□□□□ -0.44
CASP3-201ENST00000308394 GET4Q7L5D6 327 aaPredicted RBP12.33□□□□□ -0.44
CASP3-201ENST00000308394 APOBEC3FQ8IUX4 373 aaKnown RBP12.33□□□□□ -0.44
CASP3-201ENST00000308394 TEPSINQ96N21 525 aa12.33□□□□□ -0.44
CASP3-201ENST00000308394 LZTS2Q9BRK4 669 aa12.33□□□□□ -0.44
CASP3-201ENST00000308394 VAT1LQ9HCJ6 419 aa12.33□□□□□ -0.44
CASP3-201ENST00000308394 VPS54Q9P1Q0 977 aa12.33□□□□□ -0.44
CASP3-201ENST00000308394 CEBPZQ03701 1054 aaKnown RBP12.32□□□□□ -0.44
CASP3-201ENST00000308394 PRAMEF18Q5VWM3 479 aa12.32□□□□□ -0.44
CASP3-201ENST00000308394 UBA5Q9GZZ9 404 aa12.32□□□□□ -0.44
CASP3-201ENST00000308394 GPCPD1Q9NPB8 672 aa12.32□□□□□ -0.44
CASP3-201ENST00000308394 DDX49Q9Y6V7 483 aaKnown RBP12.32□□□□□ -0.44
CASP3-201ENST00000308394 PEX14O75381 377 aa12.32□□□□□ -0.44
CASP3-201ENST00000308394 KIF23Q02241 960 aaPredicted RBP12.32□□□□□ -0.44
CASP3-201ENST00000308394 DMTNQ08495 405 aa12.32□□□□□ -0.44
CASP3-201ENST00000308394 NBPF12Q5TAG4 269 aaPredicted RBP12.32□□□□□ -0.44
CASP3-201ENST00000308394 MKL1Q969V6 931 aa12.32□□□□□ -0.44
CASP3-201ENST00000308394 ADARB2Q9NS39 739 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms