RNA–Protein interactions for RNA: ENST00000301480.4

ZNF560-201, Transcript of zinc finger protein 560, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF560, Length 2,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560-201ENST00000301480 SYNE4Q8N205 404 aa5.3□□□□□ -1.56
ZNF560-201ENST00000301480 ARL6IP6Q8N6S5 226 aa5.3□□□□□ -1.56
ZNF560-201ENST00000301480 MIGA1Q8NAN2 632 aa5.3□□□□□ -1.56
ZNF560-201ENST00000301480 WDR66Q8TBY9 1149 aa5.3□□□□□ -1.56
ZNF560-201ENST00000301480 RMDN2Q96LZ7 410 aa5.3□□□□□ -1.56
ZNF560-201ENST00000301480 DNAJC25Q9H1X3 360 aa5.3□□□□□ -1.56
ZNF560-201ENST00000301480 SENP2Q9HC62 589 aa5.3□□□□□ -1.56
ZNF560-201ENST00000301480 TRPV5Q9NQA5 729 aa5.3□□□□□ -1.56
ZNF560-201ENST00000301480 BARX2Q9UMQ3 279 aaPredicted RBP5.3□□□□□ -1.56
ZNF560-201ENST00000301480 RABGAP1Q9Y3P9 1069 aa5.3□□□□□ -1.56
ZNF560-201ENST00000301480 COL11A2P13942 1736 aaPredicted RBP5.3□□□□□ -1.56
ZNF560-201ENST00000301480 KCNQ3O43525 872 aa5.29□□□□□ -1.56
ZNF560-201ENST00000301480 VAMP4O75379 141 aa5.29□□□□□ -1.56
ZNF560-201ENST00000301480 FRAT2O75474 233 aaPredicted RBP5.29□□□□□ -1.56
ZNF560-201ENST00000301480 CYP1A2P05177 515 aa5.29□□□□□ -1.56
ZNF560-201ENST00000301480 CTCFP49711 727 aaPredicted RBP5.29□□□□□ -1.56
ZNF560-201ENST00000301480 KIF11P52732 1056 aa5.29□□□□□ -1.56
ZNF560-201ENST00000301480 HSD17B7P56937 341 aa5.29□□□□□ -1.56
ZNF560-201ENST00000301480 PDIA5Q14554 519 aa5.29□□□□□ -1.56
ZNF560-201ENST00000301480 ANKRD18AQ8IVF6 992 aa5.29□□□□□ -1.56
ZNF560-201ENST00000301480 SP8Q8IXZ3 490 aa5.29□□□□□ -1.56
ZNF560-201ENST00000301480 ANKRD20A12PQ8NF67 263 aa5.29□□□□□ -1.56
ZNF560-201ENST00000301480 LILRB1Q8NHL6 650 aaPredicted RBP5.29□□□□□ -1.56
ZNF560-201ENST00000301480 GSDMBQ8TAX9 411 aa5.29□□□□□ -1.56
ZNF560-201ENST00000301480 TBC1D5Q92609 795 aa5.29□□□□□ -1.56
ZNF560-201ENST00000301480 AIDAQ96BJ3 306 aa5.29□□□□□ -1.56
ZNF560-201ENST00000301480 UTP14AQ9BVJ6 771 aaKnown RBP5.29□□□□□ -1.56
ZNF560-201ENST00000301480 ATP6V0A2Q9Y487 856 aa5.29□□□□□ -1.56
ZNF560-201ENST00000301480 ZNF609O15014 1411 aa5.29□□□□□ -1.56
ZNF560-201ENST00000301480 TBX3O15119 743 aa5.29□□□□□ -1.56
ZNF560-201ENST00000301480 AKR1B10O60218 316 aa5.29□□□□□ -1.56
ZNF560-201ENST00000301480 LILRB3O75022 631 aa5.29□□□□□ -1.56
ZNF560-201ENST00000301480 PYGLP06737 847 aa5.29□□□□□ -1.56
ZNF560-201ENST00000301480 EPHX2P34913 555 aa5.29□□□□□ -1.56
ZNF560-201ENST00000301480 MAGEA10P43363 369 aaPredicted RBP5.29□□□□□ -1.56
ZNF560-201ENST00000301480 COX10Q12887 443 aa5.29□□□□□ -1.56
ZNF560-201ENST00000301480 KRT72Q14CN4 511 aa5.29□□□□□ -1.56
ZNF560-201ENST00000301480 E2F4Q16254 413 aa5.29□□□□□ -1.56
ZNF560-201ENST00000301480 CFAP58Q5T655 872 aa5.29□□□□□ -1.56
ZNF560-201ENST00000301480 PDXDC2PQ6P474 469 aa5.29□□□□□ -1.56
ZNF560-201ENST00000301480 C16orf54Q6UWD8 224 aa5.29□□□□□ -1.56
ZNF560-201ENST00000301480 ARMC9Q7Z3E5 817 aa5.29□□□□□ -1.56
ZNF560-201ENST00000301480 CCDC65Q8IXS2 484 aa5.29□□□□□ -1.56
ZNF560-201ENST00000301480 GIMAP8Q8ND71 665 aaPredicted RBP5.29□□□□□ -1.56
ZNF560-201ENST00000301480 PBXIP1Q96AQ6 731 aa5.29□□□□□ -1.56
ZNF560-201ENST00000301480 SH3GL3Q99963 347 aa5.29□□□□□ -1.56
ZNF560-201ENST00000301480 UPF2Q9HAU5 1272 aaKnown RBP5.29□□□□□ -1.56
ZNF560-201ENST00000301480 DDX21Q9NR30 783 aaKnown RBP eCLIP5.29□□□□□ -1.56
ZNF560-201ENST00000301480 DIAPH3Q9NSV4 1193 aa5.29□□□□□ -1.56
ZNF560-201ENST00000301480 PGAP2Q9UHJ9 254 aa5.29□□□□□ -1.56
ZNF560-201ENST00000301480 ZBED9Q6R2W3 1325 aa5.28□□□□□ -1.56
ZNF560-201ENST00000301480 MYBBP1AQ9BQG0 1328 aaKnown RBP5.28□□□□□ -1.56
ZNF560-201ENST00000301480 ADAMTSL1Q8N6G6 1762 aa5.28□□□□□ -1.56
ZNF560-201ENST00000301480 A6NCN8 305 aa5.28□□□□□ -1.56
ZNF560-201ENST00000301480 TTLL13PA6NNM8 815 aa5.28□□□□□ -1.56
ZNF560-201ENST00000301480 FAM25EA8MYX2 175 aa5.28□□□□□ -1.56
ZNF560-201ENST00000301480 PPEF1O14829 653 aaPredicted RBP5.28□□□□□ -1.56
ZNF560-201ENST00000301480 NTSR2O95665 410 aa5.28□□□□□ -1.56
ZNF560-201ENST00000301480 MYBPC3Q14896 1274 aa5.28□□□□□ -1.56
ZNF560-201ENST00000301480 TNIP1Q15025 636 aa5.28□□□□□ -1.56
ZNF560-201ENST00000301480 PTPN14Q15678 1187 aa5.28□□□□□ -1.56
ZNF560-201ENST00000301480 CCDC158Q5M9N0 1113 aa5.28□□□□□ -1.56
ZNF560-201ENST00000301480 NIM1KQ8IY84 436 aa5.28□□□□□ -1.56
ZNF560-201ENST00000301480 EFCAB13Q8IY85 973 aa5.28□□□□□ -1.56
ZNF560-201ENST00000301480 TSC1Q92574 1164 aa5.28□□□□□ -1.56
ZNF560-201ENST00000301480 CLIP3Q96DZ5 547 aa5.28□□□□□ -1.56
ZNF560-201ENST00000301480 ASIC4Q96FT7 647 aa5.28□□□□□ -1.56
ZNF560-201ENST00000301480 UIMC1Q96RL1 719 aa5.28□□□□□ -1.56
ZNF560-201ENST00000301480 ZNF304Q9HCX3 659 aa5.28□□□□□ -1.56
ZNF560-201ENST00000301480 TSPYL4Q9UJ04 414 aa5.28□□□□□ -1.56
ZNF560-201ENST00000301480 GTF3C4Q9UKN8 822 aa5.28□□□□□ -1.56
ZNF560-201ENST00000301480 ATP8A1Q9Y2Q0 1164 aa5.28□□□□□ -1.56
ZNF560-201ENST00000301480 AP1G2O75843 785 aa5.28□□□□□ -1.56
ZNF560-201ENST00000301480 ITGBL1O95965 494 aaPredicted RBP5.28□□□□□ -1.56
ZNF560-201ENST00000301480 MYL1P05976 194 aa5.28□□□□□ -1.56
ZNF560-201ENST00000301480 PDGFRBP09619 1106 aa5.28□□□□□ -1.56
ZNF560-201ENST00000301480 HSPA1AP0DMV8 641 aaKnown RBP5.28□□□□□ -1.56
ZNF560-201ENST00000301480 HSPA1BP0DMV9 641 aaKnown RBP5.28□□□□□ -1.56
ZNF560-201ENST00000301480 RPS12P25398 132 aaKnown RBP5.28□□□□□ -1.56
ZNF560-201ENST00000301480 TRAPPC10P48553 1259 aa5.28□□□□□ -1.56
ZNF560-201ENST00000301480 SNX16P57768 344 aa5.28□□□□□ -1.56
ZNF560-201ENST00000301480 UBXN2AP68543 259 aa5.28□□□□□ -1.56
ZNF560-201ENST00000301480 TCIRG1Q13488 830 aa5.28□□□□□ -1.56
ZNF560-201ENST00000301480 RAPGEF1Q13905 1077 aa5.28□□□□□ -1.56
ZNF560-201ENST00000301480 IQCB1Q15051 598 aa5.28□□□□□ -1.56
ZNF560-201ENST00000301480 KIAA1614Q5VZ46 1190 aa5.28□□□□□ -1.56
ZNF560-201ENST00000301480 OLFML1Q6UWY5 402 aa5.28□□□□□ -1.56
ZNF560-201ENST00000301480 TAS1R3Q7RTX0 852 aa5.28□□□□□ -1.56
ZNF560-201ENST00000301480 LRP10Q7Z4F1 713 aa5.28□□□□□ -1.56
ZNF560-201ENST00000301480 C1orf74Q96LT6 269 aa5.28□□□□□ -1.56
ZNF560-201ENST00000301480 IRX2Q9BZI1 471 aaPredicted RBP5.28□□□□□ -1.56
ZNF560-201ENST00000301480 ADARB2Q9NS39 739 aaKnown RBP5.28□□□□□ -1.56
ZNF560-201ENST00000301480 HYPKQ9NX55 129 aa5.28□□□□□ -1.56
ZNF560-201ENST00000301480 OGFRQ9NZT2 677 aa5.28□□□□□ -1.56
ZNF560-201ENST00000301480 SLX4Q8IY92 1834 aa5.27□□□□□ -1.57
ZNF560-201ENST00000301480 DDNO94850 711 aaPredicted RBP5.27□□□□□ -1.57
ZNF560-201ENST00000301480 VIL1P09327 827 aaKnown RBP5.27□□□□□ -1.57
ZNF560-201ENST00000301480 PLCG2P16885 1265 aa5.27□□□□□ -1.57
ZNF560-201ENST00000301480 GNAT2P19087 354 aa5.27□□□□□ -1.57
ZNF560-201ENST00000301480 TMPOP42166 694 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms