RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 SAAL1Q96ER3 474 aa16.31■□□□□ 0.2
SCN3B-201ENST00000299333 ENC1O14682 589 aa16.31■□□□□ 0.2
SCN3B-201ENST00000299333 MORC3Q14149 939 aa16.31■□□□□ 0.2
SCN3B-201ENST00000299333 ANKRD20A4Q4UJ75 823 aa16.31■□□□□ 0.2
SCN3B-201ENST00000299333 ANKRD20A8PQ5CZ79 823 aa16.31■□□□□ 0.2
SCN3B-201ENST00000299333 ANKRD20A2Q5SQ80 823 aa16.31■□□□□ 0.2
SCN3B-201ENST00000299333 ANKRD20A1Q5TYW2 823 aa16.31■□□□□ 0.2
SCN3B-201ENST00000299333 JAG2Q9Y219 1238 aa16.31■□□□□ 0.2
SCN3B-201ENST00000299333 CABP7Q86V35 215 aa16.31■□□□□ 0.2
SCN3B-201ENST00000299333 CCDC117Q8IWD4 279 aaPredicted RBP16.31■□□□□ 0.2
SCN3B-201ENST00000299333 MYCT1Q8N699 235 aa16.31■□□□□ 0.2
SCN3B-201ENST00000299333 VTI1AQ96AJ9 217 aa16.31■□□□□ 0.2
SCN3B-201ENST00000299333 CDC23Q9UJX2 597 aa16.31■□□□□ 0.2
SCN3B-201ENST00000299333 EXOC7Q9UPT5 735 aa16.31■□□□□ 0.2
SCN3B-201ENST00000299333 PPME1Q9Y570 386 aa16.31■□□□□ 0.2
SCN3B-201ENST00000299333 IL9RQ01113 521 aa16.3■□□□□ 0.2
SCN3B-201ENST00000299333 TAB3Q8N5C8 712 aaPredicted RBP16.3■□□□□ 0.2
SCN3B-201ENST00000299333 WDR70Q9NW82 654 aa16.3■□□□□ 0.2
SCN3B-201ENST00000299333 SGSM2O43147 1006 aa16.3■□□□□ 0.2
SCN3B-201ENST00000299333 ZRANB2O95218 330 aaKnown RBP eCLIP16.3■□□□□ 0.2
SCN3B-201ENST00000299333 CD19P15391 556 aa16.3■□□□□ 0.2
SCN3B-201ENST00000299333 NAA35Q5VZE5 725 aa16.3■□□□□ 0.2
SCN3B-201ENST00000299333 ARMCX6Q7L4S7 300 aa16.3■□□□□ 0.2
SCN3B-201ENST00000299333 PIP4K2CQ8TBX8 421 aa16.3■□□□□ 0.2
SCN3B-201ENST00000299333 IQCDQ96DY2 449 aa16.3■□□□□ 0.2
SCN3B-201ENST00000299333 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.3■□□□□ 0.2
SCN3B-201ENST00000299333 PSDA5PKW4 1024 aaPredicted RBP16.3■□□□□ 0.2
SCN3B-201ENST00000299333 ARHGEF35A5YM69 484 aa16.3■□□□□ 0.2
SCN3B-201ENST00000299333 SYF2O95926 243 aaKnown RBP16.3■□□□□ 0.2
SCN3B-201ENST00000299333 FANCLQ9NW38 375 aa16.3■□□□□ 0.2
SCN3B-201ENST00000299333 EXOC5O00471 708 aa16.3■□□□□ 0.2
SCN3B-201ENST00000299333 ADALQ6DHV7 355 aa16.3■□□□□ 0.2
SCN3B-201ENST00000299333 MRPL44Q9H9J2 332 aaKnown RBP16.3■□□□□ 0.2
SCN3B-201ENST00000299333 STRN3Q13033 797 aa16.3■□□□□ 0.2
SCN3B-201ENST00000299333 HIBCHQ6NVY1 386 aaPredicted RBP16.3■□□□□ 0.2
SCN3B-201ENST00000299333 ZNF804AQ7Z570 1209 aa16.3■□□□□ 0.2
SCN3B-201ENST00000299333 SCYL1Q96KG9 808 aa16.3■□□□□ 0.2
SCN3B-201ENST00000299333 CD2APQ9Y5K6 639 aa16.3■□□□□ 0.2
SCN3B-201ENST00000299333 SLC35F6Q8N357 371 aa16.29■□□□□ 0.2
SCN3B-201ENST00000299333 MAP3K7O43318 606 aa16.29■□□□□ 0.2
SCN3B-201ENST00000299333 KIF1CO43896 1103 aaKnown RBP16.29■□□□□ 0.2
SCN3B-201ENST00000299333 PPP2R5EQ16537 467 aa16.29■□□□□ 0.2
SCN3B-201ENST00000299333 PPWD1Q96BP3 646 aaKnown RBP16.29■□□□□ 0.2
SCN3B-201ENST00000299333 BAG5Q9UL15 447 aa16.29■□□□□ 0.2
SCN3B-201ENST00000299333 POC1B-GALNT4F8VUJ3 575 aa16.29■□□□□ 0.2
SCN3B-201ENST00000299333 TTC4O95801 387 aa16.29■□□□□ 0.2
SCN3B-201ENST00000299333 STAT1P42224 750 aa16.29■□□□□ 0.2
SCN3B-201ENST00000299333 ZNF827Q17R98 1081 aa16.29■□□□□ 0.2
SCN3B-201ENST00000299333 IFT122Q9HBG6 1241 aa16.29■□□□□ 0.2
SCN3B-201ENST00000299333 SAP30BPQ9UHR5 308 aaKnown RBP16.29■□□□□ 0.2
SCN3B-201ENST00000299333 SKIP12755 728 aa16.29■□□□□ 0.2
SCN3B-201ENST00000299333 ATF2P15336 505 aa16.29■□□□□ 0.2
SCN3B-201ENST00000299333 LONP1P36776 959 aaKnown RBP16.29■□□□□ 0.2
SCN3B-201ENST00000299333 RDH13Q8NBN7 331 aa16.29■□□□□ 0.2
SCN3B-201ENST00000299333 TYW1Q9NV66 732 aaKnown RBP16.29■□□□□ 0.2
SCN3B-201ENST00000299333 RAB20Q9NX57 234 aa16.29■□□□□ 0.2
SCN3B-201ENST00000299333 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.29■□□□□ 0.2
SCN3B-201ENST00000299333 ANKRD65E5RJM6 399 aa16.28■□□□□ 0.2
SCN3B-201ENST00000299333 AEBP2Q6ZN18 517 aaPredicted RBP16.28■□□□□ 0.2
SCN3B-201ENST00000299333 EXOC4Q96A65 974 aa16.28■□□□□ 0.2
SCN3B-201ENST00000299333 ARMT1Q9H993 441 aa16.28■□□□□ 0.2
SCN3B-201ENST00000299333 RAPGEF3O95398 923 aa16.28■□□□□ 0.2
SCN3B-201ENST00000299333 GSTA1P08263 222 aa16.28■□□□□ 0.2
SCN3B-201ENST00000299333 GSTA2P09210 222 aa16.28■□□□□ 0.2
SCN3B-201ENST00000299333 EEF1GP26641 437 aaKnown RBP16.28■□□□□ 0.2
SCN3B-201ENST00000299333 CCDC125Q86Z20 511 aa16.28■□□□□ 0.2
SCN3B-201ENST00000299333 TEX2Q8IWB9 1127 aa16.28■□□□□ 0.2
SCN3B-201ENST00000299333 ZBBXA8MT70 800 aa16.28■□□□□ 0.2
SCN3B-201ENST00000299333 PSMD2Q13200 908 aa16.28■□□□□ 0.2
SCN3B-201ENST00000299333 ANKRD13CQ8N6S4 541 aa16.28■□□□□ 0.2
SCN3B-201ENST00000299333 ZNF280CQ8ND82 737 aa16.28■□□□□ 0.2
SCN3B-201ENST00000299333 GOLGA8FQ08AF8 430 aa16.28■□□□□ 0.2
SCN3B-201ENST00000299333 GOLGA8DPQ0D2H9 430 aa16.28■□□□□ 0.2
SCN3B-201ENST00000299333 C14orf93Q9H972 538 aaKnown RBP16.28■□□□□ 0.2
SCN3B-201ENST00000299333 EHHADHQ08426 723 aa16.28■□□□□ 0.2
SCN3B-201ENST00000299333 ME3Q16798 604 aa16.28■□□□□ 0.2
SCN3B-201ENST00000299333 RMDN2Q96LZ7 410 aa16.28■□□□□ 0.2
SCN3B-201ENST00000299333 DNM3Q9UQ16 869 aa16.28■□□□□ 0.2
SCN3B-201ENST00000299333 PCDHB13Q9Y5F0 798 aa16.28■□□□□ 0.2
SCN3B-201ENST00000299333 CTNND1O60716 968 aaKnown RBP16.27■□□□□ 0.2
SCN3B-201ENST00000299333 RFC4P35249 363 aa16.27■□□□□ 0.2
SCN3B-201ENST00000299333 PKP1Q13835 747 aa16.27■□□□□ 0.2
SCN3B-201ENST00000299333 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.27■□□□□ 0.2
SCN3B-201ENST00000299333 INTUQ9ULD6 942 aa16.27■□□□□ 0.2
SCN3B-201ENST00000299333 PTPN22Q9Y2R2 807 aa16.27■□□□□ 0.2
SCN3B-201ENST00000299333 EPN1Q9Y6I3 576 aaPredicted RBP16.27■□□□□ 0.2
SCN3B-201ENST00000299333 hCG_1642624A0A1W2PR95 340 aa16.27■□□□□ 0.2
SCN3B-201ENST00000299333 ATF7P17544 494 aaPredicted RBP16.27■□□□□ 0.2
SCN3B-201ENST00000299333 SAT1P21673 171 aa16.27■□□□□ 0.2
SCN3B-201ENST00000299333 ST5P78524 1137 aa16.27■□□□□ 0.2
SCN3B-201ENST00000299333 NONOQ15233 471 aaKnown RBP eCLIP16.27■□□□□ 0.2
SCN3B-201ENST00000299333 POGZQ7Z3K3 1410 aa16.27■□□□□ 0.2
SCN3B-201ENST00000299333 SH3GL3Q99963 347 aa16.27■□□□□ 0.2
SCN3B-201ENST00000299333 NCAPGQ9BPX3 1015 aa16.27■□□□□ 0.2
SCN3B-201ENST00000299333 EIF2AK4Q9P2K8 1649 aaKnown RBP16.27■□□□□ 0.19
SCN3B-201ENST00000299333 CLCN6P51797 869 aa16.27■□□□□ 0.19
SCN3B-201ENST00000299333 EPHB4P54760 987 aa16.27■□□□□ 0.19
SCN3B-201ENST00000299333 TMTC3Q6ZXV5 915 aa16.27■□□□□ 0.19
SCN3B-201ENST00000299333 CEP70Q8NHQ1 597 aa16.27■□□□□ 0.19
SCN3B-201ENST00000299333 EIF2AQ9BY44 585 aaKnown RBP16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms