RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 USH1GQ495M9 461 aa6.12□□□□□ -1.43
CPSF2-201ENST00000298875 TTC38Q5R3I4 469 aa6.12□□□□□ -1.43
CPSF2-201ENST00000298875 RIMS2Q9UQ26 1411 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 SLC12A2P55011 1212 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 LRMPQ12912 555 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 POSTNQ15063 836 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 KMT5BQ4FZB7 885 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 FAM71BQ8TC56 605 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 ARHGEF10LQ9HCE6 1279 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 DDX41Q9UJV9 622 aaKnown RBP6.11□□□□□ -1.43
CPSF2-201ENST00000298875 AMFRQ9UKV5 643 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.11□□□□□ -1.43
CPSF2-201ENST00000298875 ARHGAP6O43182 974 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 ADCY7P51828 1080 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 ADKP55263 362 aaKnown RBP6.11□□□□□ -1.43
CPSF2-201ENST00000298875 LGSNQ5TDP6 509 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 GRK7Q8WTQ7 553 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 LSM14BQ9BX40 385 aaKnown RBP6.11□□□□□ -1.43
CPSF2-201ENST00000298875 XAB2Q9HCS7 855 aaKnown RBP6.11□□□□□ -1.43
CPSF2-201ENST00000298875 RRAGDQ9NQL2 400 aaPredicted RBP6.11□□□□□ -1.43
CPSF2-201ENST00000298875 CASP2P42575 452 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 BLVRAP53004 296 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 NELFCDQ8IXH7 590 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 ADGBQ8N7X0 1667 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 INPP1P49441 399 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 RPS6KA2Q15349 733 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 MAN1A2O60476 641 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 PRPF6O94906 941 aaKnown RBP6.11□□□□□ -1.43
CPSF2-201ENST00000298875 ABCB4P21439 1286 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 AKAP4Q5JQC9 854 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 TRMT44Q8IYL2 757 aaKnown RBP6.11□□□□□ -1.43
CPSF2-201ENST00000298875 ZNF280CQ8ND82 737 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 MICAL1Q8TDZ2 1067 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 STK24Q9Y6E0 443 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 PARP3Q9Y6F1 533 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 GLI2P10070 1586 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 KCNJ18B7U540 433 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 KCNJ12Q14500 433 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 MCTP2Q6DN12 878 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 DENND2AQ9ULE3 1009 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 KCNK3O14649 394 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 IRS4O14654 1257 aaPredicted RBP6.11□□□□□ -1.43
CPSF2-201ENST00000298875 MX2P20592 715 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 ADCY8P40145 1251 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 ZSCAN26Q16670 478 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 SNX29Q8TEQ0 813 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 SNX14Q9Y5W7 946 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 MAIP1Q8WWC4 291 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 YY1AP1Q9H869 796 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 KLHL14Q9P2G3 628 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 EXOC3O60645 756 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 ZYXQ15942 572 aaKnown RBP6.11□□□□□ -1.43
CPSF2-201ENST00000298875 PALM2Q8IXS6 379 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 MAML3Q96JK9 1138 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.11□□□□□ -1.43
CPSF2-201ENST00000298875 SYCP2Q9BX26 1530 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 CTDSPL2Q05D32 466 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 PTPROQ16827 1216 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 CAPN12Q6ZSI9 719 aa6.11□□□□□ -1.43
CPSF2-201ENST00000298875 FAM207AQ9NSI2 230 aaPredicted RBP6.11□□□□□ -1.43
CPSF2-201ENST00000298875 NSFL1CQ9UNZ2 370 aaKnown RBP6.11□□□□□ -1.43
CPSF2-201ENST00000298875 THAP12O43422 761 aa6.1□□□□□ -1.43
CPSF2-201ENST00000298875 BUB1O43683 1085 aa6.1□□□□□ -1.43
CPSF2-201ENST00000298875 STAG1Q8WVM7 1258 aa6.1□□□□□ -1.43
CPSF2-201ENST00000298875 SDCCAG3Q96C92 435 aa6.1□□□□□ -1.43
CPSF2-201ENST00000298875 DCTPP1Q9H773 170 aa6.1□□□□□ -1.43
CPSF2-201ENST00000298875 PAIP2BQ9ULR5 123 aaKnown RBP6.1□□□□□ -1.43
CPSF2-201ENST00000298875 ZFYVE9O95405 1425 aa6.1□□□□□ -1.43
CPSF2-201ENST00000298875 KIF11P52732 1056 aa6.1□□□□□ -1.43
CPSF2-201ENST00000298875 CDC37L1Q7L3B6 337 aa6.1□□□□□ -1.43
CPSF2-201ENST00000298875 RRAGAQ7L523 313 aa6.1□□□□□ -1.43
CPSF2-201ENST00000298875 PHKBQ93100 1093 aa6.1□□□□□ -1.43
CPSF2-201ENST00000298875 ACTR5Q9H9F9 607 aaPredicted RBP6.1□□□□□ -1.43
CPSF2-201ENST00000298875 RIC8AQ9NPQ8 531 aa6.1□□□□□ -1.43
CPSF2-201ENST00000298875 SAR1BQ9Y6B6 198 aa6.1□□□□□ -1.43
CPSF2-201ENST00000298875 KAT6BQ8WYB5 2073 aa6.1□□□□□ -1.43
CPSF2-201ENST00000298875 KRIT1O00522 736 aa6.1□□□□□ -1.43
CPSF2-201ENST00000298875 CUTAO60888 179 aa6.1□□□□□ -1.43
CPSF2-201ENST00000298875 CCDC93Q567U6 631 aa6.1□□□□□ -1.43
CPSF2-201ENST00000298875 MAGEA1P43355 309 aa6.1□□□□□ -1.43
CPSF2-201ENST00000298875 IL1RL1Q01638 556 aa6.1□□□□□ -1.43
CPSF2-201ENST00000298875 PLCB4Q15147 1175 aa6.1□□□□□ -1.43
CPSF2-201ENST00000298875 SLFNL1Q499Z3 407 aa6.1□□□□□ -1.43
CPSF2-201ENST00000298875 NFATC2IPQ8NCF5 419 aa6.1□□□□□ -1.43
CPSF2-201ENST00000298875 TMOD4Q9NZQ9 345 aa6.1□□□□□ -1.43
CPSF2-201ENST00000298875 NOD1Q9Y239 953 aa6.1□□□□□ -1.43
CPSF2-201ENST00000298875 SEC24BO95487 1268 aa6.1□□□□□ -1.43
CPSF2-201ENST00000298875 NBPF20Q3BBV1 942 aa6.1□□□□□ -1.43
CPSF2-201ENST00000298875 TRIM60Q495X7 471 aa6.1□□□□□ -1.43
CPSF2-201ENST00000298875 TRIM50Q86XT4 487 aa6.1□□□□□ -1.43
CPSF2-201ENST00000298875 NRBF2Q96F24 287 aa6.1□□□□□ -1.43
CPSF2-201ENST00000298875 TXLNGQ9NUQ3 528 aa6.1□□□□□ -1.43
CPSF2-201ENST00000298875 LRWD1Q9UFC0 647 aa6.1□□□□□ -1.43
CPSF2-201ENST00000298875 GINS2Q9Y248 185 aa6.1□□□□□ -1.43
CPSF2-201ENST00000298875 PEX19P40855 299 aa6.1□□□□□ -1.43
CPSF2-201ENST00000298875 CYP2J2P51589 502 aa6.1□□□□□ -1.43
CPSF2-201ENST00000298875 ITKQ08881 620 aa6.1□□□□□ -1.43
CPSF2-201ENST00000298875 JADE1Q6IE81 842 aa6.1□□□□□ -1.43
CPSF2-201ENST00000298875 V9GY48 417 aaPredicted RBP6.1□□□□□ -1.43
CPSF2-201ENST00000298875 KDM2BQ8NHM5 1336 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms