RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 ADORA1P30542 326 aa13.3□□□□□ -0.28
SYNGAP1-201ENST00000293748 AFMP43652 599 aa13.3□□□□□ -0.28
SYNGAP1-201ENST00000293748 SCNN1DP51172 638 aa13.3□□□□□ -0.28
SYNGAP1-201ENST00000293748 GBP6Q6ZN66 633 aa13.3□□□□□ -0.28
SYNGAP1-201ENST00000293748 BRAPQ7Z569 592 aa13.3□□□□□ -0.28
SYNGAP1-201ENST00000293748 CNGA4Q8IV77 575 aa13.3□□□□□ -0.28
SYNGAP1-201ENST00000293748 CCDC144CPQ8IYA2 1237 aa13.3□□□□□ -0.28
SYNGAP1-201ENST00000293748 LMBR1Q8WVP7 490 aa13.3□□□□□ -0.28
SYNGAP1-201ENST00000293748 L3MBTL3Q96JM7 780 aaPredicted RBP13.3□□□□□ -0.28
SYNGAP1-201ENST00000293748 KRT23Q9C075 422 aa13.3□□□□□ -0.28
SYNGAP1-201ENST00000293748 TAF1DQ9H5J8 278 aaPredicted RBP13.3□□□□□ -0.28
SYNGAP1-201ENST00000293748 MYOZ2Q9NPC6 264 aa13.3□□□□□ -0.28
SYNGAP1-201ENST00000293748 MPHOSPH10O00566 681 aaKnown RBP13.3□□□□□ -0.28
SYNGAP1-201ENST00000293748 PPP2R3AQ06190 1150 aa13.3□□□□□ -0.28
SYNGAP1-201ENST00000293748 WTAPQ15007 396 aa13.3□□□□□ -0.28
SYNGAP1-201ENST00000293748 KRT26Q7Z3Y9 468 aa13.3□□□□□ -0.28
SYNGAP1-201ENST00000293748 CUL5Q93034 780 aa13.3□□□□□ -0.28
SYNGAP1-201ENST00000293748 IKBKGQ9Y6K9 419 aa13.3□□□□□ -0.28
SYNGAP1-201ENST00000293748 STAT6P42226 847 aa13.3□□□□□ -0.28
SYNGAP1-201ENST00000293748 ZNF569Q5MCW4 686 aa13.3□□□□□ -0.28
SYNGAP1-201ENST00000293748 C2orf69Q8N8R5 385 aa13.3□□□□□ -0.28
SYNGAP1-201ENST00000293748 RBM46Q8TBY0 533 aaKnown RBP13.3□□□□□ -0.28
SYNGAP1-201ENST00000293748 GTF3C6Q969F1 213 aa13.3□□□□□ -0.28
SYNGAP1-201ENST00000293748 CNNM2Q9H8M5 875 aa13.3□□□□□ -0.28
SYNGAP1-201ENST00000293748 PRC1O43663 620 aa13.3□□□□□ -0.28
SYNGAP1-201ENST00000293748 PHACTR2O75167 634 aa13.3□□□□□ -0.28
SYNGAP1-201ENST00000293748 FGFR2P21802 821 aa13.3□□□□□ -0.28
SYNGAP1-201ENST00000293748 U2AF2P26368 475 aaKnown RBP eCLIP13.3□□□□□ -0.28
SYNGAP1-201ENST00000293748 MYL5Q02045 173 aa13.3□□□□□ -0.28
SYNGAP1-201ENST00000293748 PDE4BQ07343 736 aa13.3□□□□□ -0.28
SYNGAP1-201ENST00000293748 HSP90AA4PQ58FG1 418 aa13.3□□□□□ -0.28
SYNGAP1-201ENST00000293748 TRIM75PA6NK02 468 aa13.29□□□□□ -0.28
SYNGAP1-201ENST00000293748 RIOK3O14730 519 aaKnown RBP13.29□□□□□ -0.28
SYNGAP1-201ENST00000293748 DCAF15Q66K64 600 aa13.29□□□□□ -0.28
SYNGAP1-201ENST00000293748 CPLX4Q7Z7G2 160 aa13.29□□□□□ -0.28
SYNGAP1-201ENST00000293748 PLEKHM2Q8IWE5 1019 aa13.29□□□□□ -0.28
SYNGAP1-201ENST00000293748 CRNKL1Q9BZJ0 848 aaKnown RBP13.29□□□□□ -0.28
SYNGAP1-201ENST00000293748 ACTN2P35609 894 aa13.29□□□□□ -0.28
SYNGAP1-201ENST00000293748 FSTL1Q12841 308 aa13.29□□□□□ -0.28
SYNGAP1-201ENST00000293748 B4GALNT4Q76KP1 1039 aa13.29□□□□□ -0.28
SYNGAP1-201ENST00000293748 EAF2Q96CJ1 260 aaPredicted RBP13.29□□□□□ -0.28
SYNGAP1-201ENST00000293748 DRC1Q96MC2 740 aa13.29□□□□□ -0.28
SYNGAP1-201ENST00000293748 RAD50Q92878 1312 aa13.29□□□□□ -0.28
SYNGAP1-201ENST00000293748 PPFIA3O75145 1194 aa13.29□□□□□ -0.28
SYNGAP1-201ENST00000293748 MARCKSP29966 332 aaPredicted RBP13.29□□□□□ -0.28
SYNGAP1-201ENST00000293748 KARSQ15046 597 aaKnown RBP13.29□□□□□ -0.28
SYNGAP1-201ENST00000293748 DACT2Q5SW24 774 aa13.29□□□□□ -0.28
SYNGAP1-201ENST00000293748 PPP4R3AQ6IN85 833 aa13.29□□□□□ -0.28
SYNGAP1-201ENST00000293748 ARMC9Q7Z3E5 817 aa13.29□□□□□ -0.28
SYNGAP1-201ENST00000293748 EHMT1Q9H9B1 1298 aa13.29□□□□□ -0.28
SYNGAP1-201ENST00000293748 PAG1Q9NWQ8 432 aa13.29□□□□□ -0.28
SYNGAP1-201ENST00000293748 ABT1Q9ULW3 272 aaKnown RBP13.29□□□□□ -0.28
SYNGAP1-201ENST00000293748 CRKP46108 304 aa13.29□□□□□ -0.28
SYNGAP1-201ENST00000293748 CFAP58Q5T655 872 aa13.29□□□□□ -0.28
SYNGAP1-201ENST00000293748 CRACR2BQ8N4Y2 399 aaPredicted RBP13.29□□□□□ -0.28
SYNGAP1-201ENST00000293748 KAT14Q9H8E8 782 aa13.29□□□□□ -0.28
SYNGAP1-201ENST00000293748 LZTFL1Q9NQ48 299 aa13.29□□□□□ -0.28
SYNGAP1-201ENST00000293748 PUF60Q9UHX1 559 aaKnown RBP13.29□□□□□ -0.28
SYNGAP1-201ENST00000293748 SERPINA10Q9UK55 444 aa13.29□□□□□ -0.28
SYNGAP1-201ENST00000293748 A0A1B0GUA9 196 aa13.28□□□□□ -0.28
SYNGAP1-201ENST00000293748 ZEB2O60315 1214 aa13.28□□□□□ -0.28
SYNGAP1-201ENST00000293748 RTN1Q16799 776 aa13.28□□□□□ -0.28
SYNGAP1-201ENST00000293748 RAB11FIP4Q86YS3 637 aa13.28□□□□□ -0.28
SYNGAP1-201ENST00000293748 LRRC2Q9BYS8 371 aa13.28□□□□□ -0.28
SYNGAP1-201ENST00000293748 TNRC6CQ9HCJ0 1690 aaKnown RBP13.28□□□□□ -0.28
SYNGAP1-201ENST00000293748 RHOXF2BP0C7M4 288 aa13.28□□□□□ -0.28
SYNGAP1-201ENST00000293748 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.28□□□□□ -0.28
SYNGAP1-201ENST00000293748 TBC1D5Q92609 795 aa13.28□□□□□ -0.28
SYNGAP1-201ENST00000293748 BAG1Q99933 345 aaPredicted RBP13.28□□□□□ -0.28
SYNGAP1-201ENST00000293748 RHOXF2Q9BQY4 288 aa13.28□□□□□ -0.28
SYNGAP1-201ENST00000293748 SLX4Q8IY92 1834 aa13.28□□□□□ -0.28
SYNGAP1-201ENST00000293748 PDS5AQ29RF7 1337 aaKnown RBP13.28□□□□□ -0.28
SYNGAP1-201ENST00000293748 TSPY2A6NKD2 308 aa13.28□□□□□ -0.28
SYNGAP1-201ENST00000293748 FAM160A1Q05DH4 1040 aa13.28□□□□□ -0.28
SYNGAP1-201ENST00000293748 RSRC1Q96IZ7 334 aaKnown RBP13.28□□□□□ -0.28
SYNGAP1-201ENST00000293748 BEGAINQ9BUH8 593 aa13.28□□□□□ -0.28
SYNGAP1-201ENST00000293748 GUCA1BQ9UMX6 200 aa13.28□□□□□ -0.28
SYNGAP1-201ENST00000293748 ATP5JP18859 108 aa13.27□□□□□ -0.28
SYNGAP1-201ENST00000293748 CHMLP26374 656 aa13.27□□□□□ -0.28
SYNGAP1-201ENST00000293748 RASGRF1Q13972 1273 aa13.27□□□□□ -0.28
SYNGAP1-201ENST00000293748 TXNRD3Q86VQ6 643 aa13.27□□□□□ -0.28
SYNGAP1-201ENST00000293748 LUC7L2Q9Y383 392 aaKnown RBP13.27□□□□□ -0.28
SYNGAP1-201ENST00000293748 KLRK1P26718 216 aa13.27□□□□□ -0.28
SYNGAP1-201ENST00000293748 TNNC1P63316 161 aa13.27□□□□□ -0.28
SYNGAP1-201ENST00000293748 KRBA2Q6ZNG9 492 aa13.27□□□□□ -0.28
SYNGAP1-201ENST00000293748 PPP1R14CQ8TAE6 165 aa13.27□□□□□ -0.28
SYNGAP1-201ENST00000293748 USP40Q9NVE5 1235 aa13.27□□□□□ -0.28
SYNGAP1-201ENST00000293748 ARID4AP29374 1257 aaPredicted RBP13.27□□□□□ -0.29
SYNGAP1-201ENST00000293748 SCARF1Q14162 830 aa13.27□□□□□ -0.29
SYNGAP1-201ENST00000293748 GGA3Q9NZ52 723 aa13.27□□□□□ -0.29
SYNGAP1-201ENST00000293748 DBNLQ9UJU6 430 aaKnown RBP13.27□□□□□ -0.29
SYNGAP1-201ENST00000293748 GNAQP50148 359 aa13.27□□□□□ -0.29
SYNGAP1-201ENST00000293748 SAMD7Q7Z3H4 446 aa13.27□□□□□ -0.29
SYNGAP1-201ENST00000293748 TEX11Q8IYF3 940 aa13.27□□□□□ -0.29
SYNGAP1-201ENST00000293748 VGLL2Q8N8G2 317 aa13.27□□□□□ -0.29
SYNGAP1-201ENST00000293748 KRI1Q8N9T8 703 aaKnown RBP13.27□□□□□ -0.29
SYNGAP1-201ENST00000293748 ESR2Q92731 530 aa13.27□□□□□ -0.29
SYNGAP1-201ENST00000293748 ZNF512BQ96KM6 892 aaPredicted RBP13.27□□□□□ -0.29
SYNGAP1-201ENST00000293748 IQCGQ9H095 443 aaKnown RBP13.27□□□□□ -0.29
SYNGAP1-201ENST00000293748 TBCAO75347 108 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms