RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 EXOC5O00471 708 aa17.47■□□□□ 0.39
USP43-201ENST00000285199 FTCDO95954 541 aa17.47■□□□□ 0.39
USP43-201ENST00000285199 CLTAP09496 248 aa17.47■□□□□ 0.39
USP43-201ENST00000285199 KLHL30Q0D2K2 578 aa17.47■□□□□ 0.39
USP43-201ENST00000285199 LRRC41Q15345 812 aa17.47■□□□□ 0.39
USP43-201ENST00000285199 CCDC51Q96ER9 411 aa17.47■□□□□ 0.39
USP43-201ENST00000285199 SENP2Q9HC62 589 aa17.47■□□□□ 0.39
USP43-201ENST00000285199 STK38LQ9Y2H1 464 aa17.47■□□□□ 0.39
USP43-201ENST00000285199 FAM205CA6NFA0 338 aa17.46■□□□□ 0.39
USP43-201ENST00000285199 BACH1O14867 736 aa17.46■□□□□ 0.39
USP43-201ENST00000285199 ERCC5P28715 1186 aaPredicted RBP17.46■□□□□ 0.39
USP43-201ENST00000285199 IFNAR2P48551 515 aa17.46■□□□□ 0.39
USP43-201ENST00000285199 PAK2Q13177 524 aa17.46■□□□□ 0.39
USP43-201ENST00000285199 PPP1R7Q15435 360 aa17.46■□□□□ 0.39
USP43-201ENST00000285199 NOA1Q8NC60 698 aaKnown RBP17.46■□□□□ 0.39
USP43-201ENST00000285199 LOC102724159A0A0B4J2E5 919 aa17.46■□□□□ 0.39
USP43-201ENST00000285199 CALM1P0DP23 149 aa17.46■□□□□ 0.39
USP43-201ENST00000285199 CALM2P0DP24 149 aa17.46■□□□□ 0.39
USP43-201ENST00000285199 CALM3P0DP25 149 aa17.46■□□□□ 0.39
USP43-201ENST00000285199 PWP2Q15269 919 aaKnown RBP17.46■□□□□ 0.39
USP43-201ENST00000285199 HERC4Q5GLZ8 1057 aaPredicted RBP17.46■□□□□ 0.39
USP43-201ENST00000285199 CABP7Q86V35 215 aa17.46■□□□□ 0.39
USP43-201ENST00000285199 GPCPD1Q9NPB8 672 aa17.46■□□□□ 0.39
USP43-201ENST00000285199 ABCC3O15438 1527 aa17.46■□□□□ 0.39
USP43-201ENST00000285199 TBC1D8O95759 1140 aa17.46■□□□□ 0.38
USP43-201ENST00000285199 MMP1P03956 469 aa17.46■□□□□ 0.38
USP43-201ENST00000285199 ABCB4P21439 1286 aa17.46■□□□□ 0.38
USP43-201ENST00000285199 ARID4AP29374 1257 aaPredicted RBP17.46■□□□□ 0.38
USP43-201ENST00000285199 SLC9C1Q4G0N8 1177 aa17.46■□□□□ 0.38
USP43-201ENST00000285199 SRLQ86TD4 932 aa17.46■□□□□ 0.38
USP43-201ENST00000285199 TRIML1Q8N9V2 468 aa17.46■□□□□ 0.38
USP43-201ENST00000285199 PAGE5Q96GU1 130 aa17.46■□□□□ 0.38
USP43-201ENST00000285199 ZNF287Q9HBT7 754 aa17.46■□□□□ 0.38
USP43-201ENST00000285199 C6orf50Q9HD87 102 aa17.46■□□□□ 0.38
USP43-201ENST00000285199 SAMD15Q9P1V8 674 aa17.46■□□□□ 0.38
USP43-201ENST00000285199 TULP4Q9NRJ4 1543 aa17.45■□□□□ 0.38
USP43-201ENST00000285199 NEBLO76041 1014 aa17.45■□□□□ 0.38
USP43-201ENST00000285199 TFAP4Q01664 338 aa17.45■□□□□ 0.38
USP43-201ENST00000285199 TCIRG1Q13488 830 aa17.45■□□□□ 0.38
USP43-201ENST00000285199 RAD9BQ6WBX8 426 aa17.45■□□□□ 0.38
USP43-201ENST00000285199 ENGASEQ8NFI3 743 aa17.45■□□□□ 0.38
USP43-201ENST00000285199 TSGA10Q9BZW7 698 aa17.45■□□□□ 0.38
USP43-201ENST00000285199 ARHGEF40Q8TER5 1519 aa17.45■□□□□ 0.38
USP43-201ENST00000285199 ERCC6L2Q5T890 1561 aa17.45■□□□□ 0.38
USP43-201ENST00000285199 SH2B2O14492 632 aaPredicted RBP17.45■□□□□ 0.38
USP43-201ENST00000285199 ECM2O94769 699 aaPredicted RBP17.45■□□□□ 0.38
USP43-201ENST00000285199 ATP6V1AP38606 617 aa17.45■□□□□ 0.38
USP43-201ENST00000285199 FBF1Q8TES7 1133 aa17.45■□□□□ 0.38
USP43-201ENST00000285199 SMCR8Q8TEV9 937 aaPredicted RBP17.45■□□□□ 0.38
USP43-201ENST00000285199 LPIN2Q92539 896 aa17.45■□□□□ 0.38
USP43-201ENST00000285199 ZNF185O15231 689 aa17.45■□□□□ 0.38
USP43-201ENST00000285199 PPFIA4O75335 1185 aa17.45■□□□□ 0.38
USP43-201ENST00000285199 RESP18Q5W5W9 173 aa17.45■□□□□ 0.38
USP43-201ENST00000285199 TRIM58Q8NG06 486 aa17.45■□□□□ 0.38
USP43-201ENST00000285199 USP6P35125 1406 aa17.44■□□□□ 0.38
USP43-201ENST00000285199 MAGEA9P43362 315 aa17.44■□□□□ 0.38
USP43-201ENST00000285199 DNM2P50570 870 aa17.44■□□□□ 0.38
USP43-201ENST00000285199 ADCY1Q08828 1119 aa17.44■□□□□ 0.38
USP43-201ENST00000285199 CUL4BQ13620 913 aa17.44■□□□□ 0.38
USP43-201ENST00000285199 GSDMAQ96QA5 445 aa17.44■□□□□ 0.38
USP43-201ENST00000285199 TAOK3Q9H2K8 898 aa17.44■□□□□ 0.38
USP43-201ENST00000285199 PIH1D3Q9NQM4 214 aaKnown RBP17.44■□□□□ 0.38
USP43-201ENST00000285199 ZNF446Q9NWS9 450 aa17.44■□□□□ 0.38
USP43-201ENST00000285199 FAM169AQ9Y6X4 670 aa17.44■□□□□ 0.38
USP43-201ENST00000285199 SH3TC1Q8TE82 1336 aa17.44■□□□□ 0.38
USP43-201ENST00000285199 SALL3Q9BXA9 1300 aa17.44■□□□□ 0.38
USP43-201ENST00000285199 RPS6KA1Q15418 735 aa17.44■□□□□ 0.38
USP43-201ENST00000285199 KRT26Q7Z3Y9 468 aa17.44■□□□□ 0.38
USP43-201ENST00000285199 MICAL1Q8TDZ2 1067 aa17.44■□□□□ 0.38
USP43-201ENST00000285199 TEX13AQ9BXU3 409 aaPredicted RBP17.44■□□□□ 0.38
USP43-201ENST00000285199 MYO5CQ9NQX4 1742 aa17.44■□□□□ 0.38
USP43-201ENST00000285199 PREX2Q70Z35 1606 aa17.44■□□□□ 0.38
USP43-201ENST00000285199 ABCA6Q8N139 1617 aa17.44■□□□□ 0.38
USP43-201ENST00000285199 A0A087WUV0 522 aaPredicted RBP17.44■□□□□ 0.38
USP43-201ENST00000285199 TBCAO75347 108 aaKnown RBP17.44■□□□□ 0.38
USP43-201ENST00000285199 HEXIM1O94992 359 aaKnown RBP17.44■□□□□ 0.38
USP43-201ENST00000285199 FXR1P51114 621 aaKnown RBP eCLIP17.44■□□□□ 0.38
USP43-201ENST00000285199 TMEM132AQ24JP5 1023 aa17.44■□□□□ 0.38
USP43-201ENST00000285199 SNX29Q8TEQ0 813 aa17.44■□□□□ 0.38
USP43-201ENST00000285199 BIN2Q9UBW5 565 aaPredicted RBP17.44■□□□□ 0.38
USP43-201ENST00000285199 H7C1D1 291 aa17.43■□□□□ 0.38
USP43-201ENST00000285199 POLR2FP61218 127 aaKnown RBP17.43■□□□□ 0.38
USP43-201ENST00000285199 CCDC6Q16204 474 aa17.43■□□□□ 0.38
USP43-201ENST00000285199 IFI16Q16666 785 aaKnown RBP17.43■□□□□ 0.38
USP43-201ENST00000285199 FBXW10Q5XX13 1052 aa17.43■□□□□ 0.38
USP43-201ENST00000285199 MROH7-TTC4A0A0A0MT08 1334 aa17.43■□□□□ 0.38
USP43-201ENST00000285199 ARHGAP25P42331 645 aa17.43■□□□□ 0.38
USP43-201ENST00000285199 BANK1Q8NDB2 785 aa17.43■□□□□ 0.38
USP43-201ENST00000285199 CNOT6LQ96LI5 555 aaKnown RBP17.43■□□□□ 0.38
USP43-201ENST00000285199 SMARCAL1Q9NZC9 954 aa17.43■□□□□ 0.38
USP43-201ENST00000285199 ZNF652Q9Y2D9 606 aa17.43■□□□□ 0.38
USP43-201ENST00000285199 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.43■□□□□ 0.38
USP43-201ENST00000285199 BAG3O95817 575 aa17.43■□□□□ 0.38
USP43-201ENST00000285199 MAP3K9P80192 1104 aa17.43■□□□□ 0.38
USP43-201ENST00000285199 ACTN3Q08043 901 aaPredicted RBP17.43■□□□□ 0.38
USP43-201ENST00000285199 NNTQ13423 1086 aa17.43■□□□□ 0.38
USP43-201ENST00000285199 TC2NQ8N9U0 490 aa17.43■□□□□ 0.38
USP43-201ENST00000285199 RDH13Q8NBN7 331 aa17.43■□□□□ 0.38
USP43-201ENST00000285199 NFU1Q9UMS0 254 aa17.43■□□□□ 0.38
USP43-201ENST00000285199 HYOU1Q9Y4L1 999 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms