RNA–Protein interactions for RNA: ENST00000273156.11

SEC22C-202, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,608 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-202ENST00000273156 FLT3LGP49771 235 aa20.82■□□□□ 0.92
SEC22C-202ENST00000273156 HERVK_113P62684 666 aa20.82■□□□□ 0.92
SEC22C-202ENST00000273156 NKX2-3Q8TAU0 364 aa20.82■□□□□ 0.92
SEC22C-202ENST00000273156 PXYLP1Q8TE99 480 aa20.82■□□□□ 0.92
SEC22C-202ENST00000273156 ZNF274Q96GC6 653 aaPredicted RBP20.82■□□□□ 0.92
SEC22C-202ENST00000273156 CCDC17Q96LX7 622 aa20.82■□□□□ 0.92
SEC22C-202ENST00000273156 SMC3Q9UQE7 1217 aa20.82■□□□□ 0.92
SEC22C-202ENST00000273156 NEDD4P46934 1319 aa20.82■□□□□ 0.92
SEC22C-202ENST00000273156 PTPRFP10586 1907 aa20.82■□□□□ 0.92
SEC22C-202ENST00000273156 USP17L15C9J2P7 530 aa20.82■□□□□ 0.92
SEC22C-202ENST00000273156 USP17L13C9JLJ4 530 aa20.82■□□□□ 0.92
SEC22C-202ENST00000273156 USP17L11C9JVI0 530 aa20.82■□□□□ 0.92
SEC22C-202ENST00000273156 USP17L18D6R9N7 530 aa20.82■□□□□ 0.92
SEC22C-202ENST00000273156 USP17L22D6RA61 530 aa20.82■□□□□ 0.92
SEC22C-202ENST00000273156 USP17L17D6RBQ6 530 aa20.82■□□□□ 0.92
SEC22C-202ENST00000273156 USP17L19D6RCP7 530 aa20.82■□□□□ 0.92
SEC22C-202ENST00000273156 USP17L20D6RJB6 530 aa20.82■□□□□ 0.92
SEC22C-202ENST00000273156 MPHOSPH10O00566 681 aaKnown RBP20.82■□□□□ 0.92
SEC22C-202ENST00000273156 ANTXR2P58335 489 aa20.82■□□□□ 0.92
SEC22C-202ENST00000273156 USP17L24Q0WX57 530 aa20.82■□□□□ 0.92
SEC22C-202ENST00000273156 TMEM179Q6ZVK1 233 aa20.82■□□□□ 0.92
SEC22C-202ENST00000273156 NECAB1Q8N987 351 aa20.82■□□□□ 0.92
SEC22C-202ENST00000273156 GPRC5AQ8NFJ5 357 aa20.82■□□□□ 0.92
SEC22C-202ENST00000273156 P2RX7Q99572 595 aaKnown RBP20.82■□□□□ 0.92
SEC22C-202ENST00000273156 CENPFP49454 3210 aa20.81■□□□□ 0.92
SEC22C-202ENST00000273156 LOC285556D6RIA3 1793 aa20.81■□□□□ 0.92
SEC22C-202ENST00000273156 ADCY3O60266 1144 aa20.81■□□□□ 0.92
SEC22C-202ENST00000273156 CAPN2P17655 700 aa20.81■□□□□ 0.92
SEC22C-202ENST00000273156 EVCP57679 992 aa20.81■□□□□ 0.92
SEC22C-202ENST00000273156 APOBRQ0VD83 1088 aa20.81■□□□□ 0.92
SEC22C-202ENST00000273156 C12orf60Q5U649 245 aa20.81■□□□□ 0.92
SEC22C-202ENST00000273156 PDE4DIPQ5VU43 2346 aa20.81■□□□□ 0.92
SEC22C-202ENST00000273156 CYB5R4Q7L1T6 521 aa20.81■□□□□ 0.92
SEC22C-202ENST00000273156 MTA3Q9BTC8 594 aa20.81■□□□□ 0.92
SEC22C-202ENST00000273156 KIAA0100Q14667 2235 aaKnown RBP20.8■□□□□ 0.92
SEC22C-202ENST00000273156 KDM4AO75164 1064 aa20.8■□□□□ 0.92
SEC22C-202ENST00000273156 EN2P19622 333 aaPredicted RBP20.8■□□□□ 0.92
SEC22C-202ENST00000273156 STK3Q13188 491 aa20.8■□□□□ 0.92
SEC22C-202ENST00000273156 SART3Q15020 963 aaKnown RBP20.8■□□□□ 0.92
SEC22C-202ENST00000273156 RRP12Q5JTH9 1297 aaKnown RBP20.8■□□□□ 0.92
SEC22C-202ENST00000273156 ESR2Q92731 530 aa20.8■□□□□ 0.92
SEC22C-202ENST00000273156 INCENPQ9NQS7 918 aa20.8■□□□□ 0.92
SEC22C-202ENST00000273156 ZSWIM5Q9P217 1185 aa20.8■□□□□ 0.92
SEC22C-202ENST00000273156 GABRQQ9UN88 632 aa20.8■□□□□ 0.92
SEC22C-202ENST00000273156 MYH1P12882 1939 aa20.8■□□□□ 0.92
SEC22C-202ENST00000273156 ATAD5Q96QE3 1844 aa20.8■□□□□ 0.92
SEC22C-202ENST00000273156 PFKFB2O60825 505 aa20.79■□□□□ 0.92
SEC22C-202ENST00000273156 FGRP09769 529 aa20.79■□□□□ 0.92
SEC22C-202ENST00000273156 NT5C2P49902 561 aa20.79■□□□□ 0.92
SEC22C-202ENST00000273156 CCAR1Q8IX12 1150 aaKnown RBP20.79■□□□□ 0.92
SEC22C-202ENST00000273156 GTF3C6Q969F1 213 aa20.79■□□□□ 0.92
SEC22C-202ENST00000273156 SH2D4AQ9H788 454 aa20.79■□□□□ 0.92
SEC22C-202ENST00000273156 TNRC18O15417 2968 aaPredicted RBP20.79■□□□□ 0.92
SEC22C-202ENST00000273156 CYP2D7A0A087X1C5 515 aa20.78■□□□□ 0.92
SEC22C-202ENST00000273156 MYCP01106 439 aaPredicted RBP20.78■□□□□ 0.92
SEC22C-202ENST00000273156 CYP2D6P10635 497 aa20.78■□□□□ 0.92
SEC22C-202ENST00000273156 MAPK4P31152 587 aa20.78■□□□□ 0.92
SEC22C-202ENST00000273156 PDE4BQ07343 736 aa20.78■□□□□ 0.92
SEC22C-202ENST00000273156 SEPT2Q15019 361 aa20.78■□□□□ 0.92
SEC22C-202ENST00000273156 PRPF38BQ5VTL8 546 aaKnown RBP20.78■□□□□ 0.92
SEC22C-202ENST00000273156 STK11IPQ8N1F8 1099 aa20.78■□□□□ 0.92
SEC22C-202ENST00000273156 NAP1L2Q9ULW6 460 aaPredicted RBP20.78■□□□□ 0.92
SEC22C-202ENST00000273156 TACC3Q9Y6A5 838 aa20.78■□□□□ 0.92
SEC22C-202ENST00000273156 ERICH2A1L162 156 aa20.78■□□□□ 0.92
SEC22C-202ENST00000273156 ZYXQ15942 572 aaKnown RBP20.78■□□□□ 0.92
SEC22C-202ENST00000273156 ACER1Q8TDN7 264 aa20.78■□□□□ 0.92
SEC22C-202ENST00000273156 RABGAP1Q9Y3P9 1069 aa20.78■□□□□ 0.92
SEC22C-202ENST00000273156 SH2B2O14492 632 aaPredicted RBP20.77■□□□□ 0.92
SEC22C-202ENST00000273156 IFIT3O14879 490 aaKnown RBP20.77■□□□□ 0.92
SEC22C-202ENST00000273156 GJB1P08034 283 aa20.77■□□□□ 0.92
SEC22C-202ENST00000273156 CCL5P13501 91 aa20.77■□□□□ 0.92
SEC22C-202ENST00000273156 VCAM1P19320 739 aa20.77■□□□□ 0.92
SEC22C-202ENST00000273156 PDIA3P30101 505 aaKnown RBP20.77■□□□□ 0.92
SEC22C-202ENST00000273156 GUCY1A2P33402 732 aa20.77■□□□□ 0.92
SEC22C-202ENST00000273156 CCNA1P78396 465 aa20.77■□□□□ 0.92
SEC22C-202ENST00000273156 ST3GAL1Q11201 340 aa20.77■□□□□ 0.92
SEC22C-202ENST00000273156 TMEM67Q5HYA8 995 aa20.77■□□□□ 0.92
SEC22C-202ENST00000273156 CATSPERGQ6ZRH7 1159 aa20.77■□□□□ 0.92
SEC22C-202ENST00000273156 C16orf86Q6ZW13 317 aa20.77■□□□□ 0.92
SEC22C-202ENST00000273156 TMTC2Q8N394 836 aa20.77■□□□□ 0.92
SEC22C-202ENST00000273156 IGDCC4Q8TDY8 1250 aa20.77■□□□□ 0.92
SEC22C-202ENST00000273156 SOCS4Q8WXH5 440 aa20.77■□□□□ 0.92
SEC22C-202ENST00000273156 RNF208Q9H0X6 261 aa20.77■□□□□ 0.92
SEC22C-202ENST00000273156 ARHGEF10LQ9HCE6 1279 aa20.77■□□□□ 0.92
SEC22C-202ENST00000273156 DDX60LQ5H9U9 1706 aaKnown RBP20.76■□□□□ 0.91
SEC22C-202ENST00000273156 ORC4O43929 436 aa20.76■□□□□ 0.91
SEC22C-202ENST00000273156 PDIA4P13667 645 aaKnown RBP20.76■□□□□ 0.91
SEC22C-202ENST00000273156 LIFRP42702 1097 aa20.76■□□□□ 0.91
SEC22C-202ENST00000273156 CDK8P49336 464 aa20.76■□□□□ 0.91
SEC22C-202ENST00000273156 NFKBIBQ15653 356 aa20.76■□□□□ 0.91
SEC22C-202ENST00000273156 LPAR1Q92633 364 aa20.76■□□□□ 0.91
SEC22C-202ENST00000273156 DYNLL2Q96FJ2 89 aa20.76■□□□□ 0.91
SEC22C-202ENST00000273156 LLPHQ9BRT6 129 aaKnown RBP20.76■□□□□ 0.91
SEC22C-202ENST00000273156 ZNF287Q9HBT7 754 aa20.76■□□□□ 0.91
SEC22C-202ENST00000273156 GPHNQ9NQX3 736 aaPredicted RBP20.76■□□□□ 0.91
SEC22C-202ENST00000273156 RBPJLQ9UBG7 517 aa20.76■□□□□ 0.91
SEC22C-202ENST00000273156 LAMA4Q16363 1823 aa20.76■□□□□ 0.91
SEC22C-202ENST00000273156 KLF18A0A0U1RQI7 1052 aa20.75■□□□□ 0.91
SEC22C-202ENST00000273156 GJB2P29033 226 aa20.75■□□□□ 0.91
SEC22C-202ENST00000273156 ERVK-9P63128 1117 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms