RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 ZBED3Q96IU2 234 aaPredicted RBP23.64■■□□□ 1.37
LYSMD2-201ENST00000267838 PPP6R2O75170 966 aa23.63■■□□□ 1.37
LYSMD2-201ENST00000267838 SNHG28P0DPA3 235 aa23.63■■□□□ 1.37
LYSMD2-201ENST00000267838 NLRP5P59047 1200 aa23.63■■□□□ 1.37
LYSMD2-201ENST00000267838 ASPRV1Q53RT3 343 aa23.63■■□□□ 1.37
LYSMD2-201ENST00000267838 FKBP1CQ5VVH2 108 aa23.63■■□□□ 1.37
LYSMD2-201ENST00000267838 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.63■■□□□ 1.37
LYSMD2-201ENST00000267838 CCDC73Q6ZRK6 1079 aa23.63■■□□□ 1.37
LYSMD2-201ENST00000267838 GOLPH3LQ9H4A5 285 aa23.63■■□□□ 1.37
LYSMD2-201ENST00000267838 CABP5Q9NP86 173 aa23.63■■□□□ 1.37
LYSMD2-201ENST00000267838 NOL7Q9UMY1 257 aaKnown RBP23.63■■□□□ 1.37
LYSMD2-201ENST00000267838 CNTNAP1P78357 1384 aa23.63■■□□□ 1.37
LYSMD2-201ENST00000267838 JMYQ8N9B5 988 aa23.63■■□□□ 1.37
LYSMD2-201ENST00000267838 FSIP1Q8NA03 581 aa23.63■■□□□ 1.37
LYSMD2-201ENST00000267838 GPKOWQ92917 476 aaPredicted RBP eCLIP23.63■■□□□ 1.37
LYSMD2-201ENST00000267838 CPVLQ9H3G5 476 aa23.63■■□□□ 1.37
LYSMD2-201ENST00000267838 CLSTN2Q9H4D0 955 aa23.63■■□□□ 1.37
LYSMD2-201ENST00000267838 VEZTQ9HBM0 779 aa23.63■■□□□ 1.37
LYSMD2-201ENST00000267838 GOLGB1Q14789 3259 aaKnown RBP23.62■■□□□ 1.37
LYSMD2-201ENST00000267838 MYO1BO43795 1136 aa23.62■■□□□ 1.37
LYSMD2-201ENST00000267838 MMP14P50281 582 aa23.62■■□□□ 1.37
LYSMD2-201ENST00000267838 ATP2B2Q01814 1243 aa23.62■■□□□ 1.37
LYSMD2-201ENST00000267838 MRPS27Q92552 414 aaKnown RBP23.62■■□□□ 1.37
LYSMD2-201ENST00000267838 TNFRSF25Q93038 417 aa23.62■■□□□ 1.37
LYSMD2-201ENST00000267838 KANSL2Q9H9L4 492 aa23.62■■□□□ 1.37
LYSMD2-201ENST00000267838 MYOZ2Q9NPC6 264 aa23.62■■□□□ 1.37
LYSMD2-201ENST00000267838 CCDC39Q9UFE4 941 aa23.62■■□□□ 1.37
LYSMD2-201ENST00000267838 HERC5Q9UII4 1024 aaKnown RBP23.62■■□□□ 1.37
LYSMD2-201ENST00000267838 FRMPD2Q68DX3 1309 aaPredicted RBP23.61■■□□□ 1.37
LYSMD2-201ENST00000267838 RPS12P25398 132 aaKnown RBP23.61■■□□□ 1.37
LYSMD2-201ENST00000267838 CALML3P27482 149 aa23.61■■□□□ 1.37
LYSMD2-201ENST00000267838 MARCKSP29966 332 aaPredicted RBP23.61■■□□□ 1.37
LYSMD2-201ENST00000267838 PRELPP51888 382 aa23.61■■□□□ 1.37
LYSMD2-201ENST00000267838 TMEM179Q6ZVK1 233 aa23.61■■□□□ 1.37
LYSMD2-201ENST00000267838 TNMDQ9H2S6 317 aa23.61■■□□□ 1.37
LYSMD2-201ENST00000267838 NYAP2Q9P242 653 aa23.61■■□□□ 1.37
LYSMD2-201ENST00000267838 FAM160A1Q05DH4 1040 aa23.6■■□□□ 1.37
LYSMD2-201ENST00000267838 CAMK4Q16566 473 aa23.6■■□□□ 1.37
LYSMD2-201ENST00000267838 ABCB5Q2M3G0 1257 aa23.6■■□□□ 1.37
LYSMD2-201ENST00000267838 SHROOM1Q2M3G4 852 aaPredicted RBP23.6■■□□□ 1.37
LYSMD2-201ENST00000267838 AXDND1Q5T1B0 1012 aaPredicted RBP23.6■■□□□ 1.37
LYSMD2-201ENST00000267838 WWC2Q6AWC2 1192 aa23.6■■□□□ 1.37
LYSMD2-201ENST00000267838 RRP36Q96EU6 259 aaKnown RBP23.6■■□□□ 1.37
LYSMD2-201ENST00000267838 SPON1Q9HCB6 807 aa23.6■■□□□ 1.37
LYSMD2-201ENST00000267838 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.6■■□□□ 1.37
LYSMD2-201ENST00000267838 SHTN1A0MZ66 631 aa23.6■■□□□ 1.37
LYSMD2-201ENST00000267838 WNT10BO00744 389 aa23.6■■□□□ 1.37
LYSMD2-201ENST00000267838 OFD1O75665 1012 aa23.6■■□□□ 1.37
LYSMD2-201ENST00000267838 GDF11O95390 407 aa23.6■■□□□ 1.37
LYSMD2-201ENST00000267838 SNW1Q13573 536 aaKnown RBP23.6■■□□□ 1.37
LYSMD2-201ENST00000267838 MAP3K11Q16584 847 aa23.6■■□□□ 1.37
LYSMD2-201ENST00000267838 EARS2Q5JPH6 523 aaKnown RBP23.6■■□□□ 1.37
LYSMD2-201ENST00000267838 HEATR3Q7Z4Q2 680 aa23.6■■□□□ 1.37
LYSMD2-201ENST00000267838 ENGASEQ8NFI3 743 aa23.6■■□□□ 1.37
LYSMD2-201ENST00000267838 CCDC148Q8NFR7 591 aa23.6■■□□□ 1.37
LYSMD2-201ENST00000267838 MKL1Q969V6 931 aa23.6■■□□□ 1.37
LYSMD2-201ENST00000267838 RIOX1Q9H6W3 641 aa23.6■■□□□ 1.37
LYSMD2-201ENST00000267838 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.6■■□□□ 1.37
LYSMD2-201ENST00000267838 BARHL2Q9NY43 387 aa23.6■■□□□ 1.37
LYSMD2-201ENST00000267838 FAM205CA6NFA0 338 aa23.59■■□□□ 1.37
LYSMD2-201ENST00000267838 FZD9O00144 591 aa23.59■■□□□ 1.37
LYSMD2-201ENST00000267838 ZNF500O60304 480 aaPredicted RBP23.59■■□□□ 1.37
LYSMD2-201ENST00000267838 EEF2P13639 858 aaKnown RBP23.59■■□□□ 1.37
LYSMD2-201ENST00000267838 ZNF280AP59817 542 aaPredicted RBP23.59■■□□□ 1.37
LYSMD2-201ENST00000267838 ZNF543Q08ER8 600 aa23.59■■□□□ 1.37
LYSMD2-201ENST00000267838 SEPT2Q15019 361 aa23.59■■□□□ 1.37
LYSMD2-201ENST00000267838 NBPF9Q3BBW0 867 aa23.59■■□□□ 1.37
LYSMD2-201ENST00000267838 FAM83AQ86UY5 434 aa23.59■■□□□ 1.37
LYSMD2-201ENST00000267838 FAM177A1Q8N128 213 aaPredicted RBP23.59■■□□□ 1.37
LYSMD2-201ENST00000267838 UBA5Q9GZZ9 404 aa23.59■■□□□ 1.37
LYSMD2-201ENST00000267838 PCDHB6Q9Y5E3 794 aa23.59■■□□□ 1.37
LYSMD2-201ENST00000267838 STXBP3O00186 592 aa23.58■■□□□ 1.37
LYSMD2-201ENST00000267838 TERF1P54274 439 aa23.58■■□□□ 1.37
LYSMD2-201ENST00000267838 RBM26Q5T8P6 1007 aaKnown RBP23.58■■□□□ 1.37
LYSMD2-201ENST00000267838 TYW1BQ6NUM6 668 aa23.58■■□□□ 1.37
LYSMD2-201ENST00000267838 SEC63Q9UGP8 760 aaKnown RBP23.58■■□□□ 1.37
LYSMD2-201ENST00000267838 PCDHA4Q9UN74 947 aa23.58■■□□□ 1.37
LYSMD2-201ENST00000267838 ICA1Q05084 483 aa23.57■■□□□ 1.36
LYSMD2-201ENST00000267838 HOMER1Q86YM7 354 aa23.57■■□□□ 1.36
LYSMD2-201ENST00000267838 BLIDQ8IZY5 108 aa23.57■■□□□ 1.36
LYSMD2-201ENST00000267838 FUCA2Q9BTY2 467 aa23.57■■□□□ 1.36
LYSMD2-201ENST00000267838 VAT1LQ9HCJ6 419 aa23.57■■□□□ 1.36
LYSMD2-201ENST00000267838 GPCPD1Q9NPB8 672 aa23.57■■□□□ 1.36
LYSMD2-201ENST00000267838 CEP131Q9UPN4 1083 aa23.57■■□□□ 1.36
LYSMD2-201ENST00000267838 A0A1B0GVL5 298 aa23.57■■□□□ 1.36
LYSMD2-201ENST00000267838 ATP2B1P20020 1258 aa23.57■■□□□ 1.36
LYSMD2-201ENST00000267838 CMA1P23946 247 aa23.57■■□□□ 1.36
LYSMD2-201ENST00000267838 UVSSAQ2YD98 709 aa23.57■■□□□ 1.36
LYSMD2-201ENST00000267838 GPATCH4Q5T3I0 446 aaKnown RBP23.57■■□□□ 1.36
LYSMD2-201ENST00000267838 GALNT17Q6IS24 598 aa23.57■■□□□ 1.36
LYSMD2-201ENST00000267838 RBM43Q6ZSC3 357 aaKnown RBP23.57■■□□□ 1.36
LYSMD2-201ENST00000267838 PIGSQ96S52 555 aa23.57■■□□□ 1.36
LYSMD2-201ENST00000267838 KINO60870 393 aaKnown RBP23.56■■□□□ 1.36
LYSMD2-201ENST00000267838 CUTAO60888 179 aa23.56■■□□□ 1.36
LYSMD2-201ENST00000267838 GMPSP49915 693 aaPredicted RBP23.56■■□□□ 1.36
LYSMD2-201ENST00000267838 RRP1BQ14684 758 aaKnown RBP23.56■■□□□ 1.36
LYSMD2-201ENST00000267838 NOM1Q5C9Z4 860 aaKnown RBP23.56■■□□□ 1.36
LYSMD2-201ENST00000267838 SIAH1Q8IUQ4 282 aa23.56■■□□□ 1.36
LYSMD2-201ENST00000267838 FMR1NBQ8N0W7 255 aaPredicted RBP23.56■■□□□ 1.36
LYSMD2-201ENST00000267838 DAGLBQ8NCG7 672 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms