RNA–Protein interactions for RNA: ENST00000265388.9

TNPO3-201, Transcript of transportin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNPO3, Length 4,153 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3-201ENST00000265388 ZHX3Q9H4I2 956 aa9.42□□□□□ -0.9
TNPO3-201ENST00000265388 MRPL44Q9H9J2 332 aaKnown RBP9.42□□□□□ -0.9
TNPO3-201ENST00000265388 MINPP1Q9UNW1 487 aa9.42□□□□□ -0.9
TNPO3-201ENST00000265388 TRPM3Q9HCF6 1732 aaPredicted RBP9.42□□□□□ -0.9
TNPO3-201ENST00000265388 BAZ2BQ9UIF8 2168 aaKnown RBP9.42□□□□□ -0.9
TNPO3-201ENST00000265388 KCPQ6ZWJ8 1503 aa9.42□□□□□ -0.9
TNPO3-201ENST00000265388 LDHCP07864 332 aa9.42□□□□□ -0.9
TNPO3-201ENST00000265388 TRIM14Q14142 442 aa9.42□□□□□ -0.9
TNPO3-201ENST00000265388 CCDC122Q5T0U0 273 aa9.42□□□□□ -0.9
TNPO3-201ENST00000265388 MAPKAPK5Q8IW41 473 aa9.42□□□□□ -0.9
TNPO3-201ENST00000265388 DRC1Q96MC2 740 aa9.42□□□□□ -0.9
TNPO3-201ENST00000265388 TRIM34Q9BYJ4 488 aa9.42□□□□□ -0.9
TNPO3-201ENST00000265388 PHACTR2O75167 634 aa9.42□□□□□ -0.9
TNPO3-201ENST00000265388 NTSR2O95665 410 aa9.42□□□□□ -0.9
TNPO3-201ENST00000265388 CYLC1P35663 651 aaPredicted RBP9.42□□□□□ -0.9
TNPO3-201ENST00000265388 PDE4DQ08499 809 aa9.42□□□□□ -0.9
TNPO3-201ENST00000265388 EARS2Q5JPH6 523 aaKnown RBP9.42□□□□□ -0.9
TNPO3-201ENST00000265388 SRBD1Q8N5C6 995 aaKnown RBP9.42□□□□□ -0.9
TNPO3-201ENST00000265388 CSGALNACT2Q8N6G5 542 aa9.42□□□□□ -0.9
TNPO3-201ENST00000265388 RGS22Q8NE09 1264 aa9.42□□□□□ -0.9
TNPO3-201ENST00000265388 TGFBRAP1Q8WUH2 860 aa9.42□□□□□ -0.9
TNPO3-201ENST00000265388 RABGGTAQ92696 567 aa9.42□□□□□ -0.9
TNPO3-201ENST00000265388 CCDC51Q96ER9 411 aa9.42□□□□□ -0.9
TNPO3-201ENST00000265388 DYNLL2Q96FJ2 89 aa9.42□□□□□ -0.9
TNPO3-201ENST00000265388 JADE2Q9NQC1 790 aa9.42□□□□□ -0.9
TNPO3-201ENST00000265388 INTS13Q9NVM9 706 aa9.42□□□□□ -0.9
TNPO3-201ENST00000265388 CWC15Q9P013 229 aaKnown RBP9.42□□□□□ -0.9
TNPO3-201ENST00000265388 A0A1B0GTH6 734 aa9.42□□□□□ -0.9
TNPO3-201ENST00000265388 BSDC1Q9NW68 430 aaPredicted RBP9.42□□□□□ -0.9
TNPO3-201ENST00000265388 VPS18Q9P253 973 aa9.42□□□□□ -0.9
TNPO3-201ENST00000265388 TACC3Q9Y6A5 838 aa9.42□□□□□ -0.9
TNPO3-201ENST00000265388 TNS2Q63HR2 1409 aa9.41□□□□□ -0.9
TNPO3-201ENST00000265388 FAM237AA0A1B0GTK4 181 aa9.41□□□□□ -0.9
TNPO3-201ENST00000265388 WTIPA6NIX2 430 aaPredicted RBP9.41□□□□□ -0.9
TNPO3-201ENST00000265388 PCP11498 1178 aaKnown RBP9.41□□□□□ -0.9
TNPO3-201ENST00000265388 CD44P16070 742 aaKnown RBP9.41□□□□□ -0.9
TNPO3-201ENST00000265388 TBC1D8BQ0IIM8 1120 aa9.41□□□□□ -0.9
TNPO3-201ENST00000265388 ITPK1Q13572 414 aa9.41□□□□□ -0.9
TNPO3-201ENST00000265388 NR1I3Q14994 352 aa9.41□□□□□ -0.9
TNPO3-201ENST00000265388 TRIM65Q6PJ69 517 aa9.41□□□□□ -0.9
TNPO3-201ENST00000265388 SRGAP1Q7Z6B7 1085 aa9.41□□□□□ -0.9
TNPO3-201ENST00000265388 ZFP91Q96JP5 570 aaPredicted RBP9.41□□□□□ -0.9
TNPO3-201ENST00000265388 FAM84BQ96KN1 310 aaPredicted RBP9.41□□□□□ -0.9
TNPO3-201ENST00000265388 ATP8A2Q9NTI2 1148 aa9.41□□□□□ -0.9
TNPO3-201ENST00000265388 CDC23Q9UJX2 597 aa9.41□□□□□ -0.9
TNPO3-201ENST00000265388 ADGRG1Q9Y653 693 aa9.41□□□□□ -0.9
TNPO3-201ENST00000265388 CCNT1O60563 726 aaKnown RBP9.41□□□□□ -0.9
TNPO3-201ENST00000265388 EPS15P42566 896 aa9.41□□□□□ -0.9
TNPO3-201ENST00000265388 DNA2P51530 1060 aa9.41□□□□□ -0.9
TNPO3-201ENST00000265388 GSTO1P78417 241 aa9.41□□□□□ -0.9
TNPO3-201ENST00000265388 AMPD3Q01432 767 aa9.41□□□□□ -0.9
TNPO3-201ENST00000265388 CCDC181Q5TID7 509 aa9.41□□□□□ -0.9
TNPO3-201ENST00000265388 INTS5Q6P9B9 1019 aaKnown RBP9.41□□□□□ -0.9
TNPO3-201ENST00000265388 RAD9BQ6WBX8 426 aa9.41□□□□□ -0.9
TNPO3-201ENST00000265388 FAM114A1Q8IWE2 563 aa9.41□□□□□ -0.9
TNPO3-201ENST00000265388 NEK11Q8NG66 645 aa9.41□□□□□ -0.9
TNPO3-201ENST00000265388 HSD3B7Q9H2F3 369 aa9.41□□□□□ -0.9
TNPO3-201ENST00000265388 DCP1AQ9NPI6 582 aaPredicted RBP9.41□□□□□ -0.9
TNPO3-201ENST00000265388 KCND1Q9NSA2 647 aa9.41□□□□□ -0.9
TNPO3-201ENST00000265388 MRFAP1Q9Y605 127 aa9.41□□□□□ -0.9
TNPO3-201ENST00000265388 SIPA1L3O60292 1781 aaPredicted RBP9.41□□□□□ -0.9
TNPO3-201ENST00000265388 ATRNO75882 1429 aa9.41□□□□□ -0.9
TNPO3-201ENST00000265388 KRT18P05783 430 aaKnown RBP9.41□□□□□ -0.9
TNPO3-201ENST00000265388 LONP1P36776 959 aaKnown RBP9.41□□□□□ -0.9
TNPO3-201ENST00000265388 TRAPPC10P48553 1259 aa9.41□□□□□ -0.9
TNPO3-201ENST00000265388 MDM2Q00987 491 aaPredicted RBP9.41□□□□□ -0.9
TNPO3-201ENST00000265388 SEC23AQ15436 765 aa9.41□□□□□ -0.9
TNPO3-201ENST00000265388 C6orf50Q9HD87 102 aa9.41□□□□□ -0.9
TNPO3-201ENST00000265388 BCL9O00512 1426 aa9.41□□□□□ -0.9
TNPO3-201ENST00000265388 A0A087X0B3 334 aa9.4□□□□□ -0.9
TNPO3-201ENST00000265388 TRIM49BA6NDI0 452 aa9.4□□□□□ -0.9
TNPO3-201ENST00000265388 H2AFXP16104 143 aaPredicted RBP9.4□□□□□ -0.9
TNPO3-201ENST00000265388 ZNF18P17022 549 aa9.4□□□□□ -0.9
TNPO3-201ENST00000265388 ERCC3P19447 782 aa9.4□□□□□ -0.9
TNPO3-201ENST00000265388 ATP2C1P98194 919 aaPredicted RBP9.4□□□□□ -0.9
TNPO3-201ENST00000265388 DPYDQ12882 1025 aa9.4□□□□□ -0.9
TNPO3-201ENST00000265388 FAM98CQ17RN3 349 aaKnown RBP9.4□□□□□ -0.9
TNPO3-201ENST00000265388 CCDC96Q2M329 555 aa9.4□□□□□ -0.9
TNPO3-201ENST00000265388 TMEM266Q2M3C6 531 aa9.4□□□□□ -0.9
TNPO3-201ENST00000265388 RPGRQ92834 1020 aaKnown RBP9.4□□□□□ -0.9
TNPO3-201ENST00000265388 RWDD2AQ9UIY3 292 aa9.4□□□□□ -0.9
TNPO3-201ENST00000265388 ZNF804BA4D1E1 1349 aa9.4□□□□□ -0.9
TNPO3-201ENST00000265388 MACROD2A1Z1Q3 448 aa9.4□□□□□ -0.9
TNPO3-201ENST00000265388 USP17L3A6NCW0 530 aa9.4□□□□□ -0.9
TNPO3-201ENST00000265388 USP17L4A6NCW7 530 aa9.4□□□□□ -0.9
TNPO3-201ENST00000265388 KCNQ2O43526 872 aa9.4□□□□□ -0.9
TNPO3-201ENST00000265388 KRT86O43790 486 aa9.4□□□□□ -0.9
TNPO3-201ENST00000265388 PARP1P09874 1014 aaKnown RBP9.4□□□□□ -0.9
TNPO3-201ENST00000265388 MATR3P43243 847 aaKnown RBP eCLIP9.4□□□□□ -0.97e-7■■■■□ 21.6
TNPO3-201ENST00000265388 KRT83P78385 493 aa9.4□□□□□ -0.9
TNPO3-201ENST00000265388 ENOX2Q16206 610 aaKnown RBP9.4□□□□□ -0.9
TNPO3-201ENST00000265388 LONRF2Q1L5Z9 754 aa9.4□□□□□ -0.9
TNPO3-201ENST00000265388 TDRD12Q587J7 1177 aaKnown RBP9.4□□□□□ -0.9
TNPO3-201ENST00000265388 ZNF658Q5TYW1 1059 aaPredicted RBP9.4□□□□□ -0.9
TNPO3-201ENST00000265388 USP17L1Q7RTZ2 530 aa9.4□□□□□ -0.9
TNPO3-201ENST00000265388 HDXQ7Z353 690 aa9.4□□□□□ -0.9
TNPO3-201ENST00000265388 CACNA2D4Q7Z3S7 1137 aa9.4□□□□□ -0.9
TNPO3-201ENST00000265388 CABP7Q86V35 215 aa9.4□□□□□ -0.9
TNPO3-201ENST00000265388 TXLNBQ8N3L3 684 aa9.4□□□□□ -0.9
TNPO3-201ENST00000265388 OR8K1Q8NGG5 319 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms